EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMNEG00000040847 (Gene tree)
Gene ID: 105496364
Gene Symbol: CHD6
Alias: CHD5|FLJ22369|KIAA1335|RIGB|dJ620E11.1
Full Name: chromodomain helicase DNA binding protein 6
Gene Type: protein_coding
Species: Macaca_nemestrina
Status: putative
Strand: Minus strand
Length: 213173 bases
Position: chrKQ005813.1:14233626-14446798
Accession: 105496364
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMNEP00000035854	ResIII	PF04851.15	2.2e-08	1	1
ENSMNEP00000035843	ResIII	PF04851.15	1.2e-07	1	1
ENSMNEP00000035799	ResIII	PF04851.15	1.2e-07	1	1
ENSMNEP00000035807	ResIII	PF04851.15	1.2e-07	1	1
ENSMNEP00000035832	ResIII	PF04851.15	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMNET00000060266	CHD6-202	8374	-	ENSMNEP00000035807	2716 (aa)	-	A0A2K6DIQ1
ENSMNET00000060313	CHD6-205	1641	-	ENSMNEP00000035854	546 (aa)	-	A0A2K6DIV8
ENSMNET00000060302	CHD6-204	8121	-	ENSMNEP00000035843	2706 (aa)	-	A0A2K6DIX3
ENSMNET00000060257	CHD6-201	10644	XM_011766740	ENSMNEP00000035799	2716 (aa)	XP_011765042	A0A2K6DIQ1
ENSMNET00000060291	CHD6-203	8157	-	ENSMNEP00000035832	2718 (aa)	-	A0A2K6DIS6
ENSMNET00000060324	CHD6-206	1119	-	ENSMNEP00000035866	372 (aa)	-	A0A2K6DIZ9

Gene Model

Click here to download ENSMNEG00000040847's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMNEG00000040847's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMNEG00000040847	CHD6	99	71.743	ENSMNEG00000031494	CHD9	72	62.924
ENSMNEG00000040847	CHD6	72	41.162	ENSMNEG00000031916	SMARCA5	50	42.259
ENSMNEG00000040847	CHD6	68	41.842	ENSMNEG00000039905	CHD1L	55	42.669
ENSMNEG00000040847	CHD6	85	40.164	ENSMNEG00000045073	CHD1	50	36.742
ENSMNEG00000040847	CHD6	75	40.048	ENSMNEG00000041768	SMARCA1	52	42.287
ENSMNEG00000040847	CHD6	88	42.885	ENSMNEG00000001728	CHD3	50	37.134
ENSMNEG00000040847	CHD6	99	72.894	ENSMNEG00000040978	CHD7	71	65.615
ENSMNEG00000040847	CHD6	99	72.344	ENSMNEG00000031076	CHD8	70	62.777
ENSMNEG00000040847	CHD6	85	39.718	ENSMNEG00000036875	-	61	32.211
ENSMNEG00000040847	CHD6	68	35.347	ENSMNEG00000042628	HELLS	83	37.789
ENSMNEG00000040847	CHD6	77	31.078	ENSMNEG00000038117	SMARCAD1	84	35.385

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMNEG00000040847	CHD6	100	98.270	ENSG00000124177	CHD6	100	100.000	Homo_sapiens
ENSMNEG00000040847	CHD6	99	82.418	ENSAPOG00000013736	chd6	64	75.896	Acanthochromis_polyacanthus
ENSMNEG00000040847	CHD6	99	93.394	ENSAMEG00000009496	CHD6	100	91.547	Ailuropoda_melanoleuca
ENSMNEG00000040847	CHD6	99	82.051	ENSATEG00000005608	chd6	62	77.395	Anabas_testudineus
ENSMNEG00000040847	CHD6	99	89.541	ENSAPLG00000015592	CHD6	99	72.410	Anas_platyrhynchos
ENSMNEG00000040847	CHD6	99	80.926	ENSACAG00000006842	CHD6	96	73.821	Anolis_carolinensis
ENSMNEG00000040847	CHD6	100	100.000	ENSANAG00000037548	CHD6	100	100.000	Aotus_nancymaae
ENSMNEG00000040847	CHD6	94	86.408	ENSAMXG00000009576	chd6	77	70.158	Astyanax_mexicanus
ENSMNEG00000040847	CHD6	99	93.211	ENSBTAG00000005733	CHD6	100	88.399	Bos_taurus
ENSMNEG00000040847	CHD6	100	99.817	ENSCJAG00000017920	CHD6	100	99.817	Callithrix_jacchus
ENSMNEG00000040847	CHD6	99	93.394	ENSCAFG00000009236	CHD6	100	91.584	Canis_familiaris
ENSMNEG00000040847	CHD6	100	97.985	ENSCAFG00020012906	CHD6	100	97.985	Canis_lupus_dingo
ENSMNEG00000040847	CHD6	99	93.578	ENSCHIG00000017606	CHD6	100	88.436	Capra_hircus
ENSMNEG00000040847	CHD6	84	93.067	ENSTSYG00000014635	CHD6	100	93.067	Carlito_syrichta
ENSMNEG00000040847	CHD6	99	93.394	ENSCPOG00000015641	CHD6	100	91.363	Cavia_porcellus
ENSMNEG00000040847	CHD6	100	100.000	ENSCCAG00000036828	CHD6	100	100.000	Cebus_capucinus
ENSMNEG00000040847	CHD6	100	100.000	ENSCATG00000039248	CHD6	100	100.000	Cercocebus_atys
ENSMNEG00000040847	CHD6	99	93.211	ENSCLAG00000013743	CHD6	100	91.419	Chinchilla_lanigera
ENSMNEG00000040847	CHD6	100	99.411	ENSCSAG00000013997	CHD6	100	99.411	Chlorocebus_sabaeus
ENSMNEG00000040847	CHD6	99	87.156	ENSCHOG00000012647	CHD6	95	89.855	Choloepus_hoffmanni
ENSMNEG00000040847	CHD6	99	89.358	ENSCPBG00000019382	CHD6	99	73.694	Chrysemys_picta_bellii
ENSMNEG00000040847	CHD6	100	100.000	ENSCANG00000043435	CHD6	100	100.000	Colobus_angolensis_palliatus
ENSMNEG00000040847	CHD6	99	91.376	ENSCGRG00001002694	Chd6	100	89.636	Cricetulus_griseus_chok1gshd
ENSMNEG00000040847	CHD6	100	97.253	ENSCGRG00000006749	-	100	97.253	Cricetulus_griseus_crigri
ENSMNEG00000040847	CHD6	91	88.956	ENSDARG00000017244	chd6	79	73.738	Danio_rerio
ENSMNEG00000040847	CHD6	99	92.844	ENSDNOG00000004176	CHD6	99	90.638	Dasypus_novemcinctus
ENSMNEG00000040847	CHD6	100	98.352	ENSEASG00005023433	CHD6	100	98.352	Equus_asinus_asinus
ENSMNEG00000040847	CHD6	99	93.394	ENSECAG00000011761	CHD6	100	92.865	Equus_caballus
ENSMNEG00000040847	CHD6	94	85.243	ENSELUG00000012309	chd6	89	80.139	Esox_lucius
ENSMNEG00000040847	CHD6	99	93.394	ENSFCAG00000003572	CHD6	100	91.951	Felis_catus
ENSMNEG00000040847	CHD6	99	88.991	ENSFALG00000012563	CHD6	98	71.361	Ficedula_albicollis
ENSMNEG00000040847	CHD6	99	92.661	ENSFDAG00000013791	CHD6	99	91.661	Fukomys_damarensis
ENSMNEG00000040847	CHD6	89	83.197	ENSGMOG00000011715	chd6	85	69.935	Gadus_morhua
ENSMNEG00000040847	CHD6	94	80.233	ENSGACG00000000037	chd6	99	54.862	Gasterosteus_aculeatus
ENSMNEG00000040847	CHD6	61	94.012	ENSGAGG00000007475	-	79	94.169	Gopherus_agassizii
ENSMNEG00000040847	CHD6	100	100.000	ENSGGOG00000013123	CHD6	100	100.000	Gorilla_gorilla
ENSMNEG00000040847	CHD6	99	81.319	ENSHBUG00000014701	chd6	65	73.419	Haplochromis_burtoni
ENSMNEG00000040847	CHD6	99	92.844	ENSHGLG00000004548	CHD6	100	91.844	Heterocephalus_glaber_female
ENSMNEG00000040847	CHD6	99	92.844	ENSHGLG00100006401	CHD6	100	91.844	Heterocephalus_glaber_male
ENSMNEG00000040847	CHD6	94	85.631	ENSIPUG00000003692	chd6	74	76.451	Ictalurus_punctatus
ENSMNEG00000040847	CHD6	99	93.394	ENSSTOG00000013382	CHD6	100	92.393	Ictidomys_tridecemlineatus
ENSMNEG00000040847	CHD6	99	84.404	ENSLACG00000010881	CHD6	85	76.410	Latimeria_chalumnae
ENSMNEG00000040847	CHD6	94	86.990	ENSLOCG00000007386	chd6	84	75.664	Lepisosteus_oculatus
ENSMNEG00000040847	CHD6	99	93.028	ENSLAFG00000012144	CHD6	100	91.954	Loxodonta_africana
ENSMNEG00000040847	CHD6	100	100.000	ENSMFAG00000032830	CHD6	100	100.000	Macaca_fascicularis
ENSMNEG00000040847	CHD6	100	100.000	ENSMMUG00000020458	CHD6	100	100.000	Macaca_mulatta
ENSMNEG00000040847	CHD6	100	100.000	ENSMLEG00000031965	CHD6	100	100.000	Mandrillus_leucophaeus
ENSMNEG00000040847	CHD6	99	81.685	ENSMAMG00000013111	chd6	62	77.310	Mastacembelus_armatus
ENSMNEG00000040847	CHD6	99	89.011	ENSMGAG00000001121	CHD6	99	71.956	Meleagris_gallopavo
ENSMNEG00000040847	CHD6	100	99.084	ENSMICG00000016641	CHD6	100	99.084	Microcebus_murinus
ENSMNEG00000040847	CHD6	99	91.560	ENSMOCG00000014004	-	98	94.138	Microtus_ochrogaster
ENSMNEG00000040847	CHD6	99	91.743	ENSMODG00000000720	-	99	81.469	Monodelphis_domestica
ENSMNEG00000040847	CHD6	99	91.009	MGP_CAROLIEiJ_G0024604	Chd6	100	94.768	Mus_caroli
ENSMNEG00000040847	CHD6	99	91.009	ENSMUSG00000057133	Chd6	100	94.684	Mus_musculus
ENSMNEG00000040847	CHD6	99	91.193	MGP_PahariEiJ_G0026048	Chd6	100	95.105	Mus_pahari
ENSMNEG00000040847	CHD6	99	91.009	MGP_SPRETEiJ_G0025526	Chd6	100	94.768	Mus_spretus
ENSMNEG00000040847	CHD6	99	93.394	ENSMPUG00000017695	CHD6	100	90.286	Mustela_putorius_furo
ENSMNEG00000040847	CHD6	99	93.028	ENSMLUG00000016247	CHD6	100	91.143	Myotis_lucifugus
ENSMNEG00000040847	CHD6	99	81.550	ENSNBRG00000013839	chd6	79	72.969	Neolamprologus_brichardi
ENSMNEG00000040847	CHD6	100	96.715	ENSNLEG00000006496	CHD6	100	96.715	Nomascus_leucogenys
ENSMNEG00000040847	CHD6	100	87.762	ENSOPRG00000013376	-	100	87.762	Ochotona_princeps
ENSMNEG00000040847	CHD6	99	81.502	ENSONIG00000000393	chd6	87	73.585	Oreochromis_niloticus
ENSMNEG00000040847	CHD6	99	89.541	ENSOANG00000014347	CHD6	99	70.388	Ornithorhynchus_anatinus
ENSMNEG00000040847	CHD6	99	93.578	ENSOCUG00000012394	CHD6	100	90.070	Oryctolagus_cuniculus
ENSMNEG00000040847	CHD6	96	84.571	ENSORLG00020021891	chd6	99	84.571	Oryzias_latipes_hni
ENSMNEG00000040847	CHD6	99	93.211	ENSOGAG00000002427	CHD6	100	91.789	Otolemur_garnettii
ENSMNEG00000040847	CHD6	99	93.578	ENSOARG00000002597	CHD6	100	86.150	Ovis_aries
ENSMNEG00000040847	CHD6	99	93.394	ENSPPRG00000014756	CHD6	100	92.135	Panthera_pardus
ENSMNEG00000040847	CHD6	99	93.394	ENSPTIG00000011094	CHD6	100	92.025	Panthera_tigris_altaica
ENSMNEG00000040847	CHD6	100	100.000	ENSPTRG00000013504	CHD6	99	100.000	Pan_troglodytes
ENSMNEG00000040847	CHD6	100	99.817	ENSPANG00000025554	CHD6	100	99.817	Papio_anubis
ENSMNEG00000040847	CHD6	94	86.990	ENSPKIG00000005578	chd6	79	72.605	Paramormyrops_kingsleyae
ENSMNEG00000040847	CHD6	99	82.202	ENSPMGG00000014877	chd6	86	76.600	Periophthalmus_magnuspinnatus
ENSMNEG00000040847	CHD6	100	97.253	ENSPEMG00000014672	-	100	97.253	Peromyscus_maniculatus_bairdii
ENSMNEG00000040847	CHD6	99	91.743	ENSPCIG00000028037	CHD6	100	81.122	Phascolarctos_cinereus
ENSMNEG00000040847	CHD6	99	81.319	ENSPLAG00000003128	chd6	71	72.919	Poecilia_latipinna
ENSMNEG00000040847	CHD6	99	81.319	ENSPREG00000022653	chd6	99	86.447	Poecilia_reticulata
ENSMNEG00000040847	CHD6	100	98.417	ENSPPYG00000011016	CHD6	100	98.417	Pongo_abelii
ENSMNEG00000040847	CHD6	100	99.634	ENSPCOG00000001089	CHD6	100	99.634	Propithecus_coquereli
ENSMNEG00000040847	CHD6	99	81.319	ENSPNYG00000022516	chd6	78	74.431	Pundamilia_nyererei
ENSMNEG00000040847	CHD6	94	86.990	ENSPNAG00000012825	chd6	79	70.542	Pygocentrus_nattereri
ENSMNEG00000040847	CHD6	99	90.826	ENSRNOG00000016744	Chd6	100	87.468	Rattus_norvegicus
ENSMNEG00000040847	CHD6	100	100.000	ENSSBOG00000022089	CHD6	99	100.000	Saimiri_boliviensis_boliviensis
ENSMNEG00000040847	CHD6	99	91.560	ENSSHAG00000017072	CHD6	100	80.792	Sarcophilus_harrisii
ENSMNEG00000040847	CHD6	94	86.990	ENSSFOG00015012920	chd6	81	73.562	Scleropages_formosus
ENSMNEG00000040847	CHD6	84	99.782	ENSSARG00000002615	-	61	99.342	Sorex_araneus
ENSMNEG00000040847	CHD6	99	93.394	ENSSSCG00000007360	CHD6	100	91.634	Sus_scrofa
ENSMNEG00000040847	CHD6	99	89.358	ENSTGUG00000003179	CHD6	99	73.429	Taeniopygia_guttata
ENSMNEG00000040847	CHD6	99	80.220	ENSTNIG00000017487	chd6	100	57.599	Tetraodon_nigroviridis
ENSMNEG00000040847	CHD6	99	91.376	ENSTTRG00000013438	CHD6	100	88.142	Tursiops_truncatus
ENSMNEG00000040847	CHD6	100	97.985	ENSUAMG00000024036	CHD6	100	97.985	Ursus_americanus
ENSMNEG00000040847	CHD6	100	97.985	ENSUMAG00000002017	CHD6	100	97.985	Ursus_maritimus
ENSMNEG00000040847	CHD6	98	88.037	ENSVPAG00000007941	CHD6	95	90.007	Vicugna_pacos
ENSMNEG00000040847	CHD6	99	93.394	ENSVVUG00000029164	CHD6	100	91.694	Vulpes_vulpes
ENSMNEG00000040847	CHD6	99	64.037	ENSXETG00000021445	chd6	89	69.871	Xenopus_tropicalis