EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMNEG00000040898 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Macaca_nemestrina
Status: putative
Strand: Plus strand
Length: 2509 bases
Position: chrKQ005813.1:3778533-3781041
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMNEP00000035491	Smg4_UPF3	PF03467.15	8.4e-35	1	1
ENSMNEP00000035495	Smg4_UPF3	PF03467.15	8.5e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMNET00000059948	-	582	-	ENSMNEP00000035491	193 (aa)	-	A0A2K6DHW5
ENSMNET00000059952	-	585	-	ENSMNEP00000035495	194 (aa)	-	A0A2K6DHV3

Gene Model

Click here to download ENSMNEG00000040898's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMNEG00000040898's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMNEG00000040898	-	94	70.968	ENSMNEG00000039794	UPF3B	97	70.968

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMNEG00000040898	-	100	69.432	ENSG00000125351	UPF3B	100	69.432	Homo_sapiens
ENSMNEG00000040898	-	90	56.989	ENSACIG00000020468	upf3a	85	53.676	Amphilophus_citrinellus
ENSMNEG00000040898	-	94	65.899	ENSANAG00000025598	-	67	63.514	Aotus_nancymaae
ENSMNEG00000040898	-	86	59.893	ENSANAG00000033169	-	75	55.450	Aotus_nancymaae
ENSMNEG00000040898	-	94	70.507	ENSANAG00000021894	-	97	70.507	Aotus_nancymaae
ENSMNEG00000040898	-	88	53.368	ENSAMXG00000000199	upf3b	67	51.643	Astyanax_mexicanus
ENSMNEG00000040898	-	94	71.429	ENSBTAG00000035615	UPF3B	71	72.124	Bos_taurus
ENSMNEG00000040898	-	75	55.696	ENSBTAG00000047365	-	68	55.696	Bos_taurus
ENSMNEG00000040898	-	94	70.507	ENSCJAG00000004975	UPF3B	97	70.507	Callithrix_jacchus
ENSMNEG00000040898	-	94	70.968	ENSCHIG00000018011	-	71	71.681	Capra_hircus
ENSMNEG00000040898	-	94	70.968	ENSTSYG00000014690	UPF3B	96	68.610	Carlito_syrichta
ENSMNEG00000040898	-	94	47.761	ENSCCAG00000021964	-	63	49.524	Cebus_capucinus
ENSMNEG00000040898	-	89	61.111	ENSCCAG00000029813	-	75	58.333	Cebus_capucinus
ENSMNEG00000040898	-	94	70.968	ENSCATG00000017506	UPF3B	97	70.968	Cercocebus_atys
ENSMNEG00000040898	-	55	57.391	ENSCPBG00000022854	-	81	57.391	Chrysemys_picta_bellii
ENSMNEG00000040898	-	89	38.298	ENSCING00000008396	-	91	40.645	Ciona_intestinalis
ENSMNEG00000040898	-	94	70.968	ENSCANG00000029220	UPF3B	68	71.681	Colobus_angolensis_palliatus
ENSMNEG00000040898	-	94	65.438	ENSCGRG00001013643	-	59	66.372	Cricetulus_griseus_chok1gshd
ENSMNEG00000040898	-	59	59.016	ENSFHEG00000010418	upf3a	61	59.504	Fundulus_heteroclitus
ENSMNEG00000040898	-	79	57.831	ENSGMOG00000019615	upf3a	52	58.427	Gadus_morhua
ENSMNEG00000040898	-	76	61.006	ENSGALG00000016815	-	70	61.006	Gallus_gallus
ENSMNEG00000040898	-	94	59.406	ENSGACG00000017435	upf3b	74	59.716	Gasterosteus_aculeatus
ENSMNEG00000040898	-	79	58.434	ENSGACG00000001972	upf3a	53	58.989	Gasterosteus_aculeatus
ENSMNEG00000040898	-	81	55.030	ENSGAGG00000001952	UPF3A	87	55.030	Gopherus_agassizii
ENSMNEG00000040898	-	94	70.968	ENSGGOG00000023995	UPF3B	80	67.470	Gorilla_gorilla
ENSMNEG00000040898	-	93	62.037	ENSHGLG00000011189	-	51	63.274	Heterocephalus_glaber_female
ENSMNEG00000040898	-	93	62.037	ENSHGLG00100001889	-	52	63.274	Heterocephalus_glaber_male
ENSMNEG00000040898	-	90	56.989	ENSHCOG00000013985	upf3a	68	58.101	Hippocampus_comes
ENSMNEG00000040898	-	81	51.176	ENSSTOG00000030282	-	63	53.459	Ictidomys_tridecemlineatus
ENSMNEG00000040898	-	76	52.830	ENSJJAG00000018099	-	70	52.830	Jaculus_jaculus
ENSMNEG00000040898	-	94	70.968	ENSMFAG00000045414	UPF3B	97	70.968	Macaca_fascicularis
ENSMNEG00000040898	-	100	99.485	ENSMFAG00000045275	-	100	99.485	Macaca_fascicularis
ENSMNEG00000040898	-	94	70.968	ENSMMUG00000020222	UPF3B	97	70.968	Macaca_mulatta
ENSMNEG00000040898	-	100	91.192	ENSMMUG00000046682	-	100	91.192	Macaca_mulatta
ENSMNEG00000040898	-	94	70.968	ENSMLEG00000010999	UPF3B	97	70.968	Mandrillus_leucophaeus
ENSMNEG00000040898	-	94	71.429	ENSMICG00000001743	UPF3B	68	72.124	Microcebus_murinus
ENSMNEG00000040898	-	83	53.757	ENSMOCG00000000550	Upf3a	50	54.839	Microtus_ochrogaster
ENSMNEG00000040898	-	55	59.130	ENSMALG00000002454	-	59	59.130	Monopterus_albus
ENSMNEG00000040898	-	92	53.769	ENSNBRG00000011560	upf3b	95	57.432	Neolamprologus_brichardi
ENSMNEG00000040898	-	99	74.634	ENSNLEG00000027516	-	99	74.634	Nomascus_leucogenys
ENSMNEG00000040898	-	87	79.444	ENSNLEG00000014897	UPF3B	64	78.295	Nomascus_leucogenys
ENSMNEG00000040898	-	100	51.304	ENSODEG00000000596	-	100	49.565	Octodon_degus
ENSMNEG00000040898	-	94	70.507	ENSODEG00000002186	-	51	71.239	Octodon_degus
ENSMNEG00000040898	-	98	59.565	ENSODEG00000007164	-	95	57.391	Octodon_degus
ENSMNEG00000040898	-	76	54.375	ENSODEG00000009176	-	60	54.375	Octodon_degus
ENSMNEG00000040898	-	97	65.347	ENSODEG00000006064	-	97	65.347	Octodon_degus
ENSMNEG00000040898	-	94	56.931	ENSORLG00020003758	upf3b	62	54.255	Oryzias_latipes_hni
ENSMNEG00000040898	-	94	70.968	ENSPPAG00000040390	UPF3B	80	67.470	Pan_paniscus
ENSMNEG00000040898	-	94	70.968	ENSPTIG00000015264	UPF3B	68	71.681	Panthera_tigris_altaica
ENSMNEG00000040898	-	94	70.968	ENSPTRG00000022228	UPF3B	80	67.470	Pan_troglodytes
ENSMNEG00000040898	-	99	95.312	ENSPANG00000029350	-	99	95.312	Papio_anubis
ENSMNEG00000040898	-	94	70.968	ENSPANG00000000900	UPF3B	97	70.968	Papio_anubis
ENSMNEG00000040898	-	85	64.407	ENSPKIG00000019226	upf3b	74	63.710	Paramormyrops_kingsleyae
ENSMNEG00000040898	-	94	57.921	ENSPMGG00000016067	upf3b	73	58.294	Periophthalmus_magnuspinnatus
ENSMNEG00000040898	-	83	57.225	ENSPCIG00000019590	-	66	57.233	Phascolarctos_cinereus
ENSMNEG00000040898	-	83	58.721	ENSPLAG00000011960	upf3a	54	60.784	Poecilia_latipinna
ENSMNEG00000040898	-	59	59.836	ENSPREG00000005566	upf3a	66	59.836	Poecilia_reticulata
ENSMNEG00000040898	-	68	56.757	ENSPREG00000012214	upf3b	95	57.616	Poecilia_reticulata
ENSMNEG00000040898	-	94	70.968	ENSPPYG00000020675	-	66	71.681	Pongo_abelii
ENSMNEG00000040898	-	94	70.968	ENSPCOG00000021960	UPF3B	68	71.681	Propithecus_coquereli
ENSMNEG00000040898	-	94	58.416	ENSPNAG00000021528	upf3b	68	58.768	Pygocentrus_nattereri
ENSMNEG00000040898	-	94	70.968	ENSRROG00000041031	UPF3B	97	70.968	Rhinopithecus_roxellana
ENSMNEG00000040898	-	94	70.046	ENSSBOG00000019740	UPF3B	99	69.585	Saimiri_boliviensis_boliviensis
ENSMNEG00000040898	-	95	59.314	ENSSMAG00000012913	upf3b	66	59.716	Scophthalmus_maximus
ENSMNEG00000040898	-	81	57.988	ENSSMAG00000003858	upf3a	83	53.383	Scophthalmus_maximus
ENSMNEG00000040898	-	90	56.989	ENSSDUG00000009680	upf3a	60	56.522	Seriola_dumerili
ENSMNEG00000040898	-	90	56.989	ENSSPAG00000007938	upf3a	72	58.434	Stegastes_partitus
ENSMNEG00000040898	-	94	71.429	ENSVVUG00000011594	UPF3B	97	71.429	Vulpes_vulpes
ENSMNEG00000040898	-	82	65.698	ENSXETG00000007440	upf3b	88	62.264	Xenopus_tropicalis
ENSMNEG00000040898	-	94	59.024	ENSXCOG00000016586	upf3b	98	59.024	Xiphophorus_couchianus