EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMNEG00000041366 (Gene tree)
Gene ID: 105488087
Gene Symbol: ZNF550
Alias: MGC41917
Full Name: zinc finger protein 550
Gene Type: protein_coding
Species: Macaca_nemestrina
Status: putative
Strand: Plus strand
Length: 26605 bases
Position: chrKQ005061.1:1110246-1136850
Accession: 105488087
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMNEP00000036509	zf-C2H2	PF00096.26	5.9e-37	1	6
ENSMNEP00000036509	zf-C2H2	PF00096.26	5.9e-37	2	6
ENSMNEP00000036509	zf-C2H2	PF00096.26	5.9e-37	3	6
ENSMNEP00000036509	zf-C2H2	PF00096.26	5.9e-37	4	6
ENSMNEP00000036509	zf-C2H2	PF00096.26	5.9e-37	5	6
ENSMNEP00000036509	zf-C2H2	PF00096.26	5.9e-37	6	6
ENSMNEP00000036501	zf-C2H2	PF00096.26	1.5e-36	1	6
ENSMNEP00000036501	zf-C2H2	PF00096.26	1.5e-36	2	6
ENSMNEP00000036501	zf-C2H2	PF00096.26	1.5e-36	3	6
ENSMNEP00000036501	zf-C2H2	PF00096.26	1.5e-36	4	6
ENSMNEP00000036501	zf-C2H2	PF00096.26	1.5e-36	5	6
ENSMNEP00000036501	zf-C2H2	PF00096.26	1.5e-36	6	6
ENSMNEP00000036509	zf-met	PF12874.7	0.00018	1	1
ENSMNEP00000036501	zf-met	PF12874.7	0.00043	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMNET00000060971	ZNF550-202	378	-	ENSMNEP00000036506	125 (aa)	-	A0A2K6DKT5
ENSMNET00000060974	ZNF550-203	1131	-	ENSMNEP00000036509	376 (aa)	-	A0A2K6DKT0
ENSMNET00000060966	ZNF550-201	3972	XM_011751833	ENSMNEP00000036501	417 (aa)	XP_011750135	A0A2K6DKS7

Gene Model

Click here to download ENSMNEG00000041366's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMNEG00000041366's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMNEG00000041366	ZNF550	99	55.429	ENSMNEG00000041941	ZFP1	98	55.429
ENSMNEG00000041366	ZNF550	99	61.674	ENSMNEG00000028263	ZNF582	93	56.828
ENSMNEG00000041366	ZNF550	100	41.162	ENSMNEG00000035657	ZNF205	73	41.162
ENSMNEG00000041366	ZNF550	99	60.500	ENSMNEG00000040975	ZNF829	92	60.500
ENSMNEG00000041366	ZNF550	98	57.078	ENSMNEG00000035673	ZNF2	95	57.078

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMNEG00000041366	ZNF550	100	95.276	ENSG00000251369	ZNF550	100	95.276	Homo_sapiens
ENSMNEG00000041366	ZNF550	100	99.041	ENSCATG00000020915	ZNF550	100	99.041	Cercocebus_atys
ENSMNEG00000041366	ZNF550	100	63.542	ENSCLAG00000000250	ZNF550	95	68.533	Chinchilla_lanigera
ENSMNEG00000041366	ZNF550	98	98.039	ENSCSAG00000001629	ZNF550	100	98.039	Chlorocebus_sabaeus
ENSMNEG00000041366	ZNF550	100	97.340	ENSCANG00000033735	ZNF550	100	97.340	Colobus_angolensis_palliatus
ENSMNEG00000041366	ZNF550	89	71.848	ENSDNOG00000033330	-	99	71.709	Dasypus_novemcinctus
ENSMNEG00000041366	ZNF550	99	69.029	ENSFCAG00000034766	ZNF550	99	69.029	Felis_catus
ENSMNEG00000041366	ZNF550	100	94.751	ENSGGOG00000014068	ZNF550	100	94.751	Gorilla_gorilla
ENSMNEG00000041366	ZNF550	100	71.599	ENSHGLG00000018048	ZNF550	100	71.599	Heterocephalus_glaber_female
ENSMNEG00000041366	ZNF550	100	100.000	ENSMFAG00000036005	ZNF550	100	100.000	Macaca_fascicularis
ENSMNEG00000041366	ZNF550	100	99.734	ENSMMUG00000006122	ZNF550	100	99.734	Macaca_mulatta
ENSMNEG00000041366	ZNF550	100	98.801	ENSMLEG00000034688	ZNF550	100	98.801	Mandrillus_leucophaeus
ENSMNEG00000041366	ZNF550	100	83.246	ENSMICG00000007561	ZNF550	100	83.246	Microcebus_murinus
ENSMNEG00000041366	ZNF550	99	68.766	ENSPPRG00000013475	ZNF550	99	68.766	Panthera_pardus
ENSMNEG00000041366	ZNF550	100	67.881	ENSPTIG00000018007	ZNF550	80	67.665	Panthera_tigris_altaica
ENSMNEG00000041366	ZNF550	100	94.751	ENSPTRG00000011560	ZNF550	100	94.751	Pan_troglodytes
ENSMNEG00000041366	ZNF550	100	98.404	ENSPANG00000030602	ZNF550	100	98.404	Papio_anubis
ENSMNEG00000041366	ZNF550	100	85.343	ENSPCOG00000018751	ZNF550	100	85.343	Propithecus_coquereli
ENSMNEG00000041366	ZNF550	99	72.115	ENSPVAG00000000908	ZNF550	100	72.115	Pteropus_vampyrus
ENSMNEG00000041366	ZNF550	100	98.561	ENSRBIG00000017275	ZNF550	100	98.561	Rhinopithecus_bieti
ENSMNEG00000041366	ZNF550	100	98.561	ENSRROG00000040063	ZNF550	100	98.561	Rhinopithecus_roxellana
ENSMNEG00000041366	ZNF550	98	78.502	ENSTTRG00000000293	ZNF550	100	78.502	Tursiops_truncatus