EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMNEG00000041768 (Gene tree)
Gene ID: 105468455
Gene Symbol: SMARCA1
Alias: ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SWI|hSNF2L
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 1
Gene Type: protein_coding
Species: Macaca_nemestrina
Status: putative
Strand: Minus strand
Length: 77185 bases
Position: chrKQ007533.1:13866019-13943203
Accession: 105468455
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMNEP00000037761	ResIII	PF04851.15	8.7e-12	1	1
ENSMNEP00000037786	ResIII	PF04851.15	8.7e-12	1	1
ENSMNEP00000037747	ResIII	PF04851.15	8.8e-12	1	1
ENSMNEP00000037786	DEAD	PF00270.29	1.5e-06	1	1
ENSMNEP00000037747	DEAD	PF00270.29	1.6e-06	1	1
ENSMNEP00000037761	DEAD	PF00270.29	1.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMNET00000062218	SMARCA1-201	4085	XM_011718620	ENSMNEP00000037747	1042 (aa)	XP_011716922	A0A2K6DPA5
ENSMNET00000062257	SMARCA1-203	3024	-	ENSMNEP00000037786	1007 (aa)	-	A0A2K6DPF6
ENSMNET00000062232	SMARCA1-202	3213	XM_011718617	ENSMNEP00000037761	1070 (aa)	XP_011716919	A0A2K6DPC9

Gene Model

Click here to download ENSMNEG00000041768's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMNEG00000041768's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMNEG00000041768	SMARCA1	52	42.287	ENSMNEG00000040847	CHD6	75	40.048
ENSMNEG00000041768	SMARCA1	94	86.211	ENSMNEG00000031916	SMARCA5	94	84.116
ENSMNEG00000041768	SMARCA1	52	48.207	ENSMNEG00000042628	HELLS	78	48.207
ENSMNEG00000041768	SMARCA1	56	44.112	ENSMNEG00000039905	CHD1L	61	44.112

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMNEG00000041768	SMARCA1	100	100.000	ENSG00000102038	SMARCA1	100	100.000	Homo_sapiens
ENSMNEG00000041768	SMARCA1	93	84.771	ENSAPOG00000016035	smarca5	96	85.281	Acanthochromis_polyacanthus
ENSMNEG00000041768	SMARCA1	100	97.009	ENSAMEG00000015218	SMARCA1	100	97.009	Ailuropoda_melanoleuca
ENSMNEG00000041768	SMARCA1	86	85.532	ENSACIG00000016982	smarca5	97	85.436	Amphilophus_citrinellus
ENSMNEG00000041768	SMARCA1	93	84.771	ENSAOCG00000015578	smarca5	93	83.884	Amphiprion_ocellaris
ENSMNEG00000041768	SMARCA1	93	84.771	ENSAPEG00000011117	smarca5	97	85.437	Amphiprion_percula
ENSMNEG00000041768	SMARCA1	99	81.138	ENSATEG00000012894	smarca5	95	83.213	Anabas_testudineus
ENSMNEG00000041768	SMARCA1	94	93.856	ENSAPLG00000013149	SMARCA1	100	92.153	Anas_platyrhynchos
ENSMNEG00000041768	SMARCA1	97	91.726	ENSACAG00000011376	SMARCA1	95	90.406	Anolis_carolinensis
ENSMNEG00000041768	SMARCA1	100	94.766	ENSANAG00000023098	SMARCA1	100	94.766	Aotus_nancymaae
ENSMNEG00000041768	SMARCA1	94	84.762	ENSACLG00000025356	smarca5	93	84.161	Astatotilapia_calliptera
ENSMNEG00000041768	SMARCA1	91	88.889	ENSAMXG00000011227	smarca1	99	89.784	Astyanax_mexicanus
ENSMNEG00000041768	SMARCA1	93	85.181	ENSAMXG00000005709	smarca5	92	85.174	Astyanax_mexicanus
ENSMNEG00000041768	SMARCA1	99	97.495	ENSBTAG00000002292	SMARCA1	99	97.429	Bos_taurus
ENSMNEG00000041768	SMARCA1	95	64.264	WBGene00002169	isw-1	97	62.911	Caenorhabditis_elegans
ENSMNEG00000041768	SMARCA1	100	99.626	ENSCJAG00000002868	SMARCA1	100	99.626	Callithrix_jacchus
ENSMNEG00000041768	SMARCA1	100	88.941	ENSCAFG00000018673	SMARCA1	98	89.015	Canis_familiaris
ENSMNEG00000041768	SMARCA1	99	98.647	ENSCAFG00020001751	SMARCA1	100	97.570	Canis_lupus_dingo
ENSMNEG00000041768	SMARCA1	99	97.495	ENSCHIG00000009837	SMARCA1	100	96.459	Capra_hircus
ENSMNEG00000041768	SMARCA1	98	98.584	ENSTSYG00000004240	SMARCA1	99	98.584	Carlito_syrichta
ENSMNEG00000041768	SMARCA1	98	96.300	ENSCPOG00000013601	SMARCA1	99	95.989	Cavia_porcellus
ENSMNEG00000041768	SMARCA1	100	96.729	ENSCCAG00000030817	SMARCA1	100	96.729	Cebus_capucinus
ENSMNEG00000041768	SMARCA1	100	100.000	ENSCATG00000015921	SMARCA1	100	100.000	Cercocebus_atys
ENSMNEG00000041768	SMARCA1	99	97.005	ENSCLAG00000002171	SMARCA1	100	95.981	Chinchilla_lanigera
ENSMNEG00000041768	SMARCA1	99	99.903	ENSCSAG00000008460	SMARCA1	100	98.785	Chlorocebus_sabaeus
ENSMNEG00000041768	SMARCA1	99	91.767	ENSCPBG00000001146	SMARCA1	94	91.767	Chrysemys_picta_bellii
ENSMNEG00000041768	SMARCA1	94	74.921	ENSCING00000004110	swi/snf	97	73.104	Ciona_intestinalis
ENSMNEG00000041768	SMARCA1	94	73.931	ENSCSAVG00000004620	-	100	74.165	Ciona_savignyi
ENSMNEG00000041768	SMARCA1	100	99.907	ENSCANG00000007183	SMARCA1	100	99.907	Colobus_angolensis_palliatus
ENSMNEG00000041768	SMARCA1	100	94.865	ENSCGRG00001010776	Smarca1	98	95.243	Cricetulus_griseus_chok1gshd
ENSMNEG00000041768	SMARCA1	98	96.162	ENSCGRG00000015301	Smarca1	99	96.162	Cricetulus_griseus_crigri
ENSMNEG00000041768	SMARCA1	95	84.326	ENSCSEG00000000328	smarca5	95	82.118	Cynoglossus_semilaevis
ENSMNEG00000041768	SMARCA1	94	84.127	ENSCVAG00000008668	smarca5	97	84.848	Cyprinodon_variegatus
ENSMNEG00000041768	SMARCA1	96	85.930	ENSDARG00000012776	smarca1	96	86.103	Danio_rerio
ENSMNEG00000041768	SMARCA1	94	83.841	ENSDARG00000052348	smarca5	93	83.851	Danio_rerio
ENSMNEG00000041768	SMARCA1	99	96.139	ENSDNOG00000004315	SMARCA1	100	96.139	Dasypus_novemcinctus
ENSMNEG00000041768	SMARCA1	100	96.449	ENSDORG00000009270	Smarca1	100	96.449	Dipodomys_ordii
ENSMNEG00000041768	SMARCA1	94	74.004	FBgn0011604	Iswi	98	71.457	Drosophila_melanogaster
ENSMNEG00000041768	SMARCA1	81	93.750	ENSETEG00000017426	SMARCA1	86	93.750	Echinops_telfairi
ENSMNEG00000041768	SMARCA1	93	82.334	ENSEBUG00000001239	smarca5	95	81.790	Eptatretus_burgeri
ENSMNEG00000041768	SMARCA1	97	93.750	ENSEASG00005008218	SMARCA1	99	93.936	Equus_asinus_asinus
ENSMNEG00000041768	SMARCA1	99	97.977	ENSECAG00000012106	SMARCA1	100	96.925	Equus_caballus
ENSMNEG00000041768	SMARCA1	80	97.682	ENSEEUG00000014927	SMARCA1	83	97.682	Erinaceus_europaeus
ENSMNEG00000041768	SMARCA1	96	87.140	ENSELUG00000010515	smarca1	97	86.768	Esox_lucius
ENSMNEG00000041768	SMARCA1	100	98.598	ENSFCAG00000018496	SMARCA1	100	98.598	Felis_catus
ENSMNEG00000041768	SMARCA1	91	93.531	ENSFALG00000000209	SMARCA1	98	93.633	Ficedula_albicollis
ENSMNEG00000041768	SMARCA1	98	96.503	ENSFDAG00000009818	SMARCA1	97	97.982	Fukomys_damarensis
ENSMNEG00000041768	SMARCA1	94	84.550	ENSFHEG00000007687	smarca5	91	85.497	Fundulus_heteroclitus
ENSMNEG00000041768	SMARCA1	96	93.043	ENSGALG00000008431	SMARCA1	97	92.835	Gallus_gallus
ENSMNEG00000041768	SMARCA1	94	84.550	ENSGAFG00000017731	smarca5	93	83.851	Gambusia_affinis
ENSMNEG00000041768	SMARCA1	94	93.664	ENSGAGG00000023575	SMARCA1	100	92.378	Gopherus_agassizii
ENSMNEG00000041768	SMARCA1	76	96.000	ENSGGOG00000012841	-	98	96.000	Gorilla_gorilla
ENSMNEG00000041768	SMARCA1	99	97.101	ENSHGLG00000003080	SMARCA1	99	97.039	Heterocephalus_glaber_female
ENSMNEG00000041768	SMARCA1	97	97.035	ENSHGLG00100001102	SMARCA1	100	95.656	Heterocephalus_glaber_male
ENSMNEG00000041768	SMARCA1	93	84.591	ENSHCOG00000005458	smarca5	93	83.851	Hippocampus_comes
ENSMNEG00000041768	SMARCA1	94	83.878	ENSIPUG00000005229	SMARCA5	95	83.784	Ictalurus_punctatus
ENSMNEG00000041768	SMARCA1	98	86.032	ENSIPUG00000016905	Smarca1	98	87.812	Ictalurus_punctatus
ENSMNEG00000041768	SMARCA1	100	97.333	ENSSTOG00000014524	SMARCA1	100	97.333	Ictidomys_tridecemlineatus
ENSMNEG00000041768	SMARCA1	100	96.545	ENSJJAG00000002593	Smarca1	100	96.545	Jaculus_jaculus
ENSMNEG00000041768	SMARCA1	93	84.803	ENSKMAG00000003777	smarca5	93	84.058	Kryptolebias_marmoratus
ENSMNEG00000041768	SMARCA1	95	83.631	ENSLBEG00000018112	smarca5	93	83.747	Labrus_bergylta
ENSMNEG00000041768	SMARCA1	93	83.708	ENSLBEG00000013295	SMARCA1	100	84.829	Labrus_bergylta
ENSMNEG00000041768	SMARCA1	99	89.257	ENSLACG00000016697	SMARCA1	98	89.120	Latimeria_chalumnae
ENSMNEG00000041768	SMARCA1	97	88.832	ENSLOCG00000014591	smarca1	95	90.010	Lepisosteus_oculatus
ENSMNEG00000041768	SMARCA1	98	96.468	ENSLAFG00000000896	SMARCA1	100	96.468	Loxodonta_africana
ENSMNEG00000041768	SMARCA1	100	100.000	ENSMFAG00000002117	SMARCA1	100	100.000	Macaca_fascicularis
ENSMNEG00000041768	SMARCA1	100	100.000	ENSMMUG00000008818	SMARCA1	100	100.000	Macaca_mulatta
ENSMNEG00000041768	SMARCA1	100	99.907	ENSMLEG00000043198	SMARCA1	100	99.907	Mandrillus_leucophaeus
ENSMNEG00000041768	SMARCA1	94	84.762	ENSMAMG00000014294	smarca5	95	82.644	Mastacembelus_armatus
ENSMNEG00000041768	SMARCA1	94	84.762	ENSMZEG00005009369	smarca5	93	84.161	Maylandia_zebra
ENSMNEG00000041768	SMARCA1	96	92.000	ENSMGAG00000007042	SMARCA1	99	91.494	Meleagris_gallopavo
ENSMNEG00000041768	SMARCA1	100	95.893	ENSMAUG00000008133	Smarca1	100	95.893	Mesocricetus_auratus
ENSMNEG00000041768	SMARCA1	100	98.224	ENSMICG00000015768	SMARCA1	100	98.224	Microcebus_murinus
ENSMNEG00000041768	SMARCA1	100	95.066	ENSMOCG00000009464	Smarca1	100	95.066	Microtus_ochrogaster
ENSMNEG00000041768	SMARCA1	94	82.180	ENSMMOG00000005547	smarca5	97	82.316	Mola_mola
ENSMNEG00000041768	SMARCA1	99	90.120	ENSMODG00000013187	-	99	88.517	Monodelphis_domestica
ENSMNEG00000041768	SMARCA1	95	83.247	ENSMALG00000002081	smarca5	97	82.497	Monopterus_albus
ENSMNEG00000041768	SMARCA1	100	95.893	MGP_CAROLIEiJ_G0033034	Smarca1	100	95.893	Mus_caroli
ENSMNEG00000041768	SMARCA1	100	95.893	ENSMUSG00000031099	Smarca1	100	95.893	Mus_musculus
ENSMNEG00000041768	SMARCA1	100	95.989	MGP_PahariEiJ_G0031579	Smarca1	100	95.989	Mus_pahari
ENSMNEG00000041768	SMARCA1	100	95.989	MGP_SPRETEiJ_G0034192	Smarca1	100	95.989	Mus_spretus
ENSMNEG00000041768	SMARCA1	100	98.224	ENSMPUG00000017423	SMARCA1	95	98.224	Mustela_putorius_furo
ENSMNEG00000041768	SMARCA1	100	94.590	ENSMLUG00000029614	SMARCA1	100	94.030	Myotis_lucifugus
ENSMNEG00000041768	SMARCA1	100	96.657	ENSNGAG00000006492	Smarca1	100	96.657	Nannospalax_galili
ENSMNEG00000041768	SMARCA1	94	84.868	ENSNBRG00000004463	smarca5	97	84.265	Neolamprologus_brichardi
ENSMNEG00000041768	SMARCA1	100	99.159	ENSNLEG00000015179	SMARCA1	100	99.159	Nomascus_leucogenys
ENSMNEG00000041768	SMARCA1	94	81.866	ENSMEUG00000008819	SMARCA1	100	81.866	Notamacropus_eugenii
ENSMNEG00000041768	SMARCA1	100	95.446	ENSODEG00000012163	SMARCA1	99	96.466	Octodon_degus
ENSMNEG00000041768	SMARCA1	94	84.868	ENSONIG00000009993	smarca5	93	84.265	Oreochromis_niloticus
ENSMNEG00000041768	SMARCA1	94	94.093	ENSOANG00000002862	SMARCA1	100	92.683	Ornithorhynchus_anatinus
ENSMNEG00000041768	SMARCA1	99	96.715	ENSOCUG00000001047	SMARCA1	100	95.607	Oryctolagus_cuniculus
ENSMNEG00000041768	SMARCA1	93	84.591	ENSORLG00000021998	smarca5	93	83.851	Oryzias_latipes
ENSMNEG00000041768	SMARCA1	93	84.697	ENSORLG00020017679	smarca5	93	83.954	Oryzias_latipes_hni
ENSMNEG00000041768	SMARCA1	93	84.591	ENSORLG00015017210	smarca5	93	83.747	Oryzias_latipes_hsok
ENSMNEG00000041768	SMARCA1	93	84.591	ENSOMEG00000000086	smarca5	93	83.747	Oryzias_melastigma
ENSMNEG00000041768	SMARCA1	100	97.343	ENSOGAG00000004399	SMARCA1	99	98.376	Otolemur_garnettii
ENSMNEG00000041768	SMARCA1	97	97.077	ENSOARG00000014638	SMARCA1	100	97.681	Ovis_aries
ENSMNEG00000041768	SMARCA1	100	100.000	ENSPPAG00000034647	SMARCA1	100	100.000	Pan_paniscus
ENSMNEG00000041768	SMARCA1	100	98.598	ENSPPRG00000008929	SMARCA1	100	98.598	Panthera_pardus
ENSMNEG00000041768	SMARCA1	97	96.586	ENSPTIG00000000915	SMARCA1	98	97.151	Panthera_tigris_altaica
ENSMNEG00000041768	SMARCA1	100	100.000	ENSPTRG00000049876	SMARCA1	100	100.000	Pan_troglodytes
ENSMNEG00000041768	SMARCA1	100	100.000	ENSPANG00000003871	SMARCA1	100	100.000	Papio_anubis
ENSMNEG00000041768	SMARCA1	97	86.256	ENSPKIG00000013411	smarca1	99	86.256	Paramormyrops_kingsleyae
ENSMNEG00000041768	SMARCA1	97	91.524	ENSPSIG00000010101	SMARCA1	100	92.073	Pelodiscus_sinensis
ENSMNEG00000041768	SMARCA1	100	96.562	ENSPEMG00000017503	Smarca1	100	96.562	Peromyscus_maniculatus_bairdii
ENSMNEG00000041768	SMARCA1	98	92.065	ENSPCIG00000015460	SMARCA1	97	92.237	Phascolarctos_cinereus
ENSMNEG00000041768	SMARCA1	93	84.803	ENSPFOG00000007649	smarca5	93	83.851	Poecilia_formosa
ENSMNEG00000041768	SMARCA1	93	84.803	ENSPLAG00000003363	smarca5	93	83.851	Poecilia_latipinna
ENSMNEG00000041768	SMARCA1	93	84.697	ENSPMEG00000019849	smarca5	94	83.436	Poecilia_mexicana
ENSMNEG00000041768	SMARCA1	93	84.697	ENSPREG00000023250	smarca5	94	83.436	Poecilia_reticulata
ENSMNEG00000041768	SMARCA1	99	97.198	ENSPPYG00000020703	SMARCA1	100	96.168	Pongo_abelii
ENSMNEG00000041768	SMARCA1	81	90.909	ENSPCOG00000020722	SMARCA1	94	93.953	Propithecus_coquereli
ENSMNEG00000041768	SMARCA1	94	95.791	ENSPVAG00000003805	SMARCA1	94	97.297	Pteropus_vampyrus
ENSMNEG00000041768	SMARCA1	58	83.924	ENSPNYG00000012299	smarca5	92	82.933	Pundamilia_nyererei
ENSMNEG00000041768	SMARCA1	99	96.329	ENSRNOG00000003762	Smarca1	100	95.327	Rattus_norvegicus
ENSMNEG00000041768	SMARCA1	100	99.907	ENSRROG00000034167	SMARCA1	100	99.907	Rhinopithecus_roxellana
ENSMNEG00000041768	SMARCA1	99	96.749	ENSSBOG00000020641	SMARCA1	100	98.589	Saimiri_boliviensis_boliviensis
ENSMNEG00000041768	SMARCA1	94	86.856	ENSSHAG00000013518	SMARCA1	99	85.685	Sarcophilus_harrisii
ENSMNEG00000041768	SMARCA1	95	88.854	ENSSFOG00015009043	smarca1	96	88.730	Scleropages_formosus
ENSMNEG00000041768	SMARCA1	95	83.820	ENSSFOG00015016794	smarca5	98	85.005	Scleropages_formosus
ENSMNEG00000041768	SMARCA1	94	83.368	ENSSMAG00000004801	smarca5	93	83.489	Scophthalmus_maximus
ENSMNEG00000041768	SMARCA1	94	84.233	ENSSDUG00000020690	smarca5	94	83.644	Seriola_dumerili
ENSMNEG00000041768	SMARCA1	94	84.233	ENSSLDG00000025190	smarca5	94	83.644	Seriola_lalandi_dorsalis
ENSMNEG00000041768	SMARCA1	90	88.406	ENSSARG00000000842	SMARCA1	87	97.163	Sorex_araneus
ENSMNEG00000041768	SMARCA1	98	91.388	ENSSPUG00000000590	SMARCA1	97	90.070	Sphenodon_punctatus
ENSMNEG00000041768	SMARCA1	94	84.444	ENSSPAG00000002894	smarca5	97	82.937	Stegastes_partitus
ENSMNEG00000041768	SMARCA1	99	97.690	ENSSSCG00000012649	SMARCA1	100	97.690	Sus_scrofa
ENSMNEG00000041768	SMARCA1	94	93.538	ENSTGUG00000003899	-	100	91.650	Taeniopygia_guttata
ENSMNEG00000041768	SMARCA1	94	84.339	ENSTRUG00000014094	smarca5	95	81.737	Takifugu_rubripes
ENSMNEG00000041768	SMARCA1	93	83.493	ENSTNIG00000017717	smarca5	94	80.639	Tetraodon_nigroviridis
ENSMNEG00000041768	SMARCA1	89	96.158	ENSTBEG00000014973	SMARCA1	99	91.304	Tupaia_belangeri
ENSMNEG00000041768	SMARCA1	97	94.052	ENSTTRG00000006168	SMARCA1	99	95.320	Tursiops_truncatus
ENSMNEG00000041768	SMARCA1	99	98.068	ENSUAMG00000020201	SMARCA1	100	97.009	Ursus_americanus
ENSMNEG00000041768	SMARCA1	98	93.737	ENSUMAG00000004073	SMARCA1	97	98.783	Ursus_maritimus
ENSMNEG00000041768	SMARCA1	77	99.683	ENSVPAG00000010492	-	85	99.675	Vicugna_pacos
ENSMNEG00000041768	SMARCA1	97	98.774	ENSVVUG00000008878	SMARCA1	100	98.956	Vulpes_vulpes
ENSMNEG00000041768	SMARCA1	95	90.198	ENSXETG00000001526	smarca1	99	88.370	Xenopus_tropicalis
ENSMNEG00000041768	SMARCA1	94	84.444	ENSXCOG00000011170	smarca5	96	83.747	Xiphophorus_couchianus
ENSMNEG00000041768	SMARCA1	94	84.444	ENSXMAG00000009678	smarca5	98	84.641	Xiphophorus_maculatus