EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMNEG00000042333 (Gene tree)
Gene ID: 105468153
Gene Symbol: SF3B1
Alias: Hsh155|PRPF10|Prp10|SAP155|SF3b155
Full Name: splicing factor 3b subunit 1
Gene Type: protein_coding
Species: Macaca_nemestrina
Status: putative
Strand: Plus strand
Length: 49063 bases
Position: chrKQ007436.1:11947939-11997001
Accession: 105468153
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMNEP00000038788	SF3b1	PF08920.10	5.7e-47	1	1
ENSMNEP00000038777	SF3b1	PF08920.10	6.6e-47	1	1
ENSMNEP00000038742	SF3b1	PF08920.10	6.7e-47	1	1
ENSMNEP00000038784	SF3b1	PF08920.10	6.7e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMNET00000063259	SF3B1-203	3888	-	ENSMNEP00000038777	1295 (aa)	-	A0A2K6DSC1
ENSMNET00000063224	SF3B1-201	4335	XM_011718200	ENSMNEP00000038742	1304 (aa)	XP_011716502	A0A2K6DS90
ENSMNET00000063270	SF3B1-205	5114	XM_011718201	ENSMNEP00000038788	1158 (aa)	XP_011716503	A0A2K6DS78
ENSMNET00000063266	SF3B1-204	3924	-	ENSMNEP00000038784	1307 (aa)	-	A0A2K6DS76
ENSMNET00000063233	SF3B1-202	435	-	ENSMNEP00000038751	144 (aa)	-	A0A2K6DS50

Gene Model

Click here to download ENSMNEG00000042333's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMNEG00000042333's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMNEG00000042333	SF3B1	100	100.000	ENSG00000115524	SF3B1	100	100.000	Homo_sapiens
ENSMNEG00000042333	SF3B1	100	94.953	ENSAPOG00000011894	sf3b1	100	93.622	Acanthochromis_polyacanthus
ENSMNEG00000042333	SF3B1	100	100.000	ENSAMEG00000013809	SF3B1	99	99.923	Ailuropoda_melanoleuca
ENSMNEG00000042333	SF3B1	100	94.416	ENSACIG00000020910	sf3b1	97	93.064	Amphilophus_citrinellus
ENSMNEG00000042333	SF3B1	100	95.038	ENSAOCG00000004478	sf3b1	100	93.622	Amphiprion_ocellaris
ENSMNEG00000042333	SF3B1	100	95.038	ENSAPEG00000012937	sf3b1	100	93.622	Amphiprion_percula
ENSMNEG00000042333	SF3B1	100	94.949	ENSATEG00000020435	sf3b1	100	93.693	Anabas_testudineus
ENSMNEG00000042333	SF3B1	100	99.741	ENSAPLG00000003993	SF3B1	99	99.382	Anas_platyrhynchos
ENSMNEG00000042333	SF3B1	100	99.223	ENSACAG00000009612	SF3B1	100	98.850	Anolis_carolinensis
ENSMNEG00000042333	SF3B1	100	100.000	ENSANAG00000021577	SF3B1	100	100.000	Aotus_nancymaae
ENSMNEG00000042333	SF3B1	100	94.264	ENSACLG00000023470	sf3b1	100	92.705	Astatotilapia_calliptera
ENSMNEG00000042333	SF3B1	100	95.377	ENSAMXG00000002219	sf3b1	100	93.997	Astyanax_mexicanus
ENSMNEG00000042333	SF3B1	100	99.923	ENSBTAG00000008915	SF3B1	100	99.923	Bos_taurus
ENSMNEG00000042333	SF3B1	99	70.318	WBGene00011605	sftb-1	98	66.516	Caenorhabditis_elegans
ENSMNEG00000042333	SF3B1	100	100.000	ENSCJAG00000003902	SF3B1	100	100.000	Callithrix_jacchus
ENSMNEG00000042333	SF3B1	100	100.000	ENSCAFG00000010826	SF3B1	100	100.000	Canis_familiaris
ENSMNEG00000042333	SF3B1	100	100.000	ENSCAFG00020004750	SF3B1	100	100.000	Canis_lupus_dingo
ENSMNEG00000042333	SF3B1	100	99.923	ENSCHIG00000015226	SF3B1	100	99.923	Capra_hircus
ENSMNEG00000042333	SF3B1	100	99.923	ENSTSYG00000009214	SF3B1	100	99.923	Carlito_syrichta
ENSMNEG00000042333	SF3B1	100	100.000	ENSCAPG00000006547	SF3B1	99	100.000	Cavia_aperea
ENSMNEG00000042333	SF3B1	100	100.000	ENSCPOG00000009353	SF3B1	100	100.000	Cavia_porcellus
ENSMNEG00000042333	SF3B1	100	100.000	ENSCCAG00000020506	SF3B1	100	100.000	Cebus_capucinus
ENSMNEG00000042333	SF3B1	100	100.000	ENSCATG00000035735	SF3B1	100	100.000	Cercocebus_atys
ENSMNEG00000042333	SF3B1	100	100.000	ENSCLAG00000014767	SF3B1	99	100.000	Chinchilla_lanigera
ENSMNEG00000042333	SF3B1	100	100.000	ENSCSAG00000011505	SF3B1	100	100.000	Chlorocebus_sabaeus
ENSMNEG00000042333	SF3B1	80	96.154	ENSCHOG00000009860	SF3B1	76	98.438	Choloepus_hoffmanni
ENSMNEG00000042333	SF3B1	100	99.396	ENSCPBG00000021902	SF3B1	100	99.233	Chrysemys_picta_bellii
ENSMNEG00000042333	SF3B1	69	80.586	ENSCING00000002558	-	99	78.771	Ciona_intestinalis
ENSMNEG00000042333	SF3B1	99	83.348	ENSCSAVG00000002559	-	99	79.832	Ciona_savignyi
ENSMNEG00000042333	SF3B1	100	100.000	ENSCANG00000029415	SF3B1	100	100.000	Colobus_angolensis_palliatus
ENSMNEG00000042333	SF3B1	100	100.000	ENSCGRG00001016990	Sf3b1	100	100.000	Cricetulus_griseus_chok1gshd
ENSMNEG00000042333	SF3B1	100	100.000	ENSCGRG00000005301	Sf3b1	100	100.000	Cricetulus_griseus_crigri
ENSMNEG00000042333	SF3B1	100	91.495	ENSCSEG00000003860	sf3b1	100	89.939	Cynoglossus_semilaevis
ENSMNEG00000042333	SF3B1	96	95.251	ENSCVAG00000003680	sf3b1	99	93.676	Cyprinodon_variegatus
ENSMNEG00000042333	SF3B1	100	94.949	ENSDARG00000056138	sf3b1	100	93.394	Danio_rerio
ENSMNEG00000042333	SF3B1	100	100.000	ENSDNOG00000011754	SF3B1	100	99.923	Dasypus_novemcinctus
ENSMNEG00000042333	SF3B1	100	100.000	ENSDORG00000002399	Sf3b1	100	97.297	Dipodomys_ordii
ENSMNEG00000042333	SF3B1	100	80.000	FBgn0031266	Sf3b1	100	76.618	Drosophila_melanogaster
ENSMNEG00000042333	SF3B1	83	99.351	ENSETEG00000009188	SF3B1	100	99.351	Echinops_telfairi
ENSMNEG00000042333	SF3B1	100	89.338	ENSEBUG00000004325	sf3b1	100	90.191	Eptatretus_burgeri
ENSMNEG00000042333	SF3B1	100	99.923	ENSEASG00005020159	SF3B1	98	99.923	Equus_asinus_asinus
ENSMNEG00000042333	SF3B1	100	99.923	ENSECAG00000021657	SF3B1	98	99.923	Equus_caballus
ENSMNEG00000042333	SF3B1	87	100.000	ENSEEUG00000000836	SF3B1	81	100.000	Erinaceus_europaeus
ENSMNEG00000042333	SF3B1	100	94.048	ENSELUG00000005977	sf3b1	98	92.981	Esox_lucius
ENSMNEG00000042333	SF3B1	100	100.000	ENSFCAG00000005038	SF3B1	100	100.000	Felis_catus
ENSMNEG00000042333	SF3B1	100	99.827	ENSFALG00000004281	SF3B1	99	99.459	Ficedula_albicollis
ENSMNEG00000042333	SF3B1	100	100.000	ENSFDAG00000017510	SF3B1	100	100.000	Fukomys_damarensis
ENSMNEG00000042333	SF3B1	100	94.949	ENSFHEG00000014333	sf3b1	100	92.938	Fundulus_heteroclitus
ENSMNEG00000042333	SF3B1	100	94.597	ENSGMOG00000006773	sf3b1	100	93.531	Gadus_morhua
ENSMNEG00000042333	SF3B1	100	99.741	ENSGALG00000008038	SF3B1	100	99.387	Gallus_gallus
ENSMNEG00000042333	SF3B1	100	94.692	ENSGAFG00000000704	sf3b1	99	93.441	Gambusia_affinis
ENSMNEG00000042333	SF3B1	100	94.931	ENSGACG00000008839	sf3b1	100	93.674	Gasterosteus_aculeatus
ENSMNEG00000042333	SF3B1	100	99.396	ENSGAGG00000017478	SF3B1	100	98.553	Gopherus_agassizii
ENSMNEG00000042333	SF3B1	100	92.367	ENSGGOG00000009264	SF3B1	99	94.231	Gorilla_gorilla
ENSMNEG00000042333	SF3B1	99	94.340	ENSHBUG00000007705	sf3b1	99	92.770	Haplochromis_burtoni
ENSMNEG00000042333	SF3B1	100	100.000	ENSHGLG00000008285	-	100	99.464	Heterocephalus_glaber_female
ENSMNEG00000042333	SF3B1	100	97.755	ENSHGLG00100005535	-	100	97.471	Heterocephalus_glaber_male
ENSMNEG00000042333	SF3B1	100	94.553	ENSHCOG00000016775	sf3b1	100	92.825	Hippocampus_comes
ENSMNEG00000042333	SF3B1	100	95.291	ENSIPUG00000013171	sf3b1	100	93.997	Ictalurus_punctatus
ENSMNEG00000042333	SF3B1	100	100.000	ENSSTOG00000011034	SF3B1	100	100.000	Ictidomys_tridecemlineatus
ENSMNEG00000042333	SF3B1	100	99.914	ENSJJAG00000010903	Sf3b1	99	99.922	Jaculus_jaculus
ENSMNEG00000042333	SF3B1	100	94.369	ENSKMAG00000004009	sf3b1	100	93.030	Kryptolebias_marmoratus
ENSMNEG00000042333	SF3B1	100	95.095	ENSLBEG00000022208	sf3b1	100	93.435	Labrus_bergylta
ENSMNEG00000042333	SF3B1	100	93.499	ENSLACG00000014832	SF3B1	99	92.490	Latimeria_chalumnae
ENSMNEG00000042333	SF3B1	100	96.147	ENSLOCG00000003899	sf3b1	100	94.765	Lepisosteus_oculatus
ENSMNEG00000042333	SF3B1	100	100.000	ENSLAFG00000001956	SF3B1	100	100.000	Loxodonta_africana
ENSMNEG00000042333	SF3B1	100	100.000	ENSMMUG00000022430	SF3B1	99	100.000	Macaca_mulatta
ENSMNEG00000042333	SF3B1	100	93.023	ENSMLEG00000026141	SF3B1	99	94.027	Mandrillus_leucophaeus
ENSMNEG00000042333	SF3B1	100	94.863	ENSMAMG00000010241	sf3b1	100	93.617	Mastacembelus_armatus
ENSMNEG00000042333	SF3B1	100	94.264	ENSMZEG00005021254	sf3b1	100	92.705	Maylandia_zebra
ENSMNEG00000042333	SF3B1	100	99.741	ENSMGAG00000007017	SF3B1	99	98.764	Meleagris_gallopavo
ENSMNEG00000042333	SF3B1	100	95.250	ENSMAUG00000009071	Sf3b1	99	95.753	Mesocricetus_auratus
ENSMNEG00000042333	SF3B1	100	99.923	ENSMICG00000013879	SF3B1	100	99.923	Microcebus_murinus
ENSMNEG00000042333	SF3B1	100	95.078	ENSMOCG00000000455	Sf3b1	99	95.595	Microtus_ochrogaster
ENSMNEG00000042333	SF3B1	84	93.059	ENSMMOG00000000475	sf3b1	100	93.059	Mola_mola
ENSMNEG00000042333	SF3B1	100	99.655	ENSMODG00000012275	SF3B1	100	99.310	Monodelphis_domestica
ENSMNEG00000042333	SF3B1	100	94.777	ENSMALG00000017211	sf3b1	100	93.541	Monopterus_albus
ENSMNEG00000042333	SF3B1	100	100.000	MGP_CAROLIEiJ_G0014141	Sf3b1	100	100.000	Mus_caroli
ENSMNEG00000042333	SF3B1	100	100.000	ENSMUSG00000025982	Sf3b1	100	100.000	Mus_musculus
ENSMNEG00000042333	SF3B1	100	100.000	MGP_SPRETEiJ_G0014947	Sf3b1	100	100.000	Mus_spretus
ENSMNEG00000042333	SF3B1	100	100.000	ENSMPUG00000007799	SF3B1	100	100.000	Mustela_putorius_furo
ENSMNEG00000042333	SF3B1	100	98.773	ENSMLUG00000000840	SF3B1	100	98.773	Myotis_lucifugus
ENSMNEG00000042333	SF3B1	100	100.000	ENSNGAG00000021884	-	100	99.692	Nannospalax_galili
ENSMNEG00000042333	SF3B1	100	94.502	ENSNBRG00000015816	sf3b1	100	89.109	Neolamprologus_brichardi
ENSMNEG00000042333	SF3B1	100	100.000	ENSNLEG00000006861	SF3B1	100	100.000	Nomascus_leucogenys
ENSMNEG00000042333	SF3B1	71	100.000	ENSMEUG00000015848	-	67	100.000	Notamacropus_eugenii
ENSMNEG00000042333	SF3B1	100	89.637	ENSOPRG00000008596	SF3B1	100	88.113	Ochotona_princeps
ENSMNEG00000042333	SF3B1	100	100.000	ENSODEG00000011153	-	100	100.000	Octodon_degus
ENSMNEG00000042333	SF3B1	100	94.264	ENSONIG00000013758	sf3b1	100	92.705	Oreochromis_niloticus
ENSMNEG00000042333	SF3B1	94	98.985	ENSOCUG00000012722	-	96	98.985	Oryctolagus_cuniculus
ENSMNEG00000042333	SF3B1	100	94.777	ENSORLG00000020219	sf3b1	100	93.389	Oryzias_latipes
ENSMNEG00000042333	SF3B1	100	94.777	ENSORLG00020001746	sf3b1	100	93.389	Oryzias_latipes_hni
ENSMNEG00000042333	SF3B1	64	90.952	ENSORLG00015001759	sf3b1	98	90.952	Oryzias_latipes_hsok
ENSMNEG00000042333	SF3B1	100	94.777	ENSOMEG00000019231	sf3b1	100	93.394	Oryzias_melastigma
ENSMNEG00000042333	SF3B1	100	99.923	ENSOARG00000015374	SF3B1	100	99.923	Ovis_aries
ENSMNEG00000042333	SF3B1	100	100.000	ENSPPAG00000035007	SF3B1	100	100.000	Pan_paniscus
ENSMNEG00000042333	SF3B1	100	100.000	ENSPPRG00000009090	SF3B1	100	100.000	Panthera_pardus
ENSMNEG00000042333	SF3B1	100	100.000	ENSPTIG00000021557	SF3B1	100	100.000	Panthera_tigris_altaica
ENSMNEG00000042333	SF3B1	99	91.455	ENSPTRG00000012771	SF3B1	99	91.455	Pan_troglodytes
ENSMNEG00000042333	SF3B1	100	100.000	ENSPANG00000013417	SF3B1	100	100.000	Papio_anubis
ENSMNEG00000042333	SF3B1	100	96.055	ENSPKIG00000000784	sf3b1	100	94.901	Paramormyrops_kingsleyae
ENSMNEG00000042333	SF3B1	100	98.014	ENSPSIG00000017222	SF3B1	99	97.395	Pelodiscus_sinensis
ENSMNEG00000042333	SF3B1	89	95.761	ENSPMGG00000004330	sf3b1	99	93.850	Periophthalmus_magnuspinnatus
ENSMNEG00000042333	SF3B1	100	100.000	ENSPEMG00000010699	Sf3b1	100	100.000	Peromyscus_maniculatus_bairdii
ENSMNEG00000042333	SF3B1	99	92.612	ENSPMAG00000001311	sf3b1	100	90.205	Petromyzon_marinus
ENSMNEG00000042333	SF3B1	100	99.655	ENSPCIG00000010642	SF3B1	100	99.233	Phascolarctos_cinereus
ENSMNEG00000042333	SF3B1	100	94.692	ENSPFOG00000000073	sf3b1	100	93.323	Poecilia_formosa
ENSMNEG00000042333	SF3B1	100	94.692	ENSPLAG00000002293	sf3b1	100	93.394	Poecilia_latipinna
ENSMNEG00000042333	SF3B1	100	94.692	ENSPMEG00000000446	sf3b1	98	93.394	Poecilia_mexicana
ENSMNEG00000042333	SF3B1	100	94.777	ENSPREG00000019652	sf3b1	100	93.470	Poecilia_reticulata
ENSMNEG00000042333	SF3B1	100	98.814	ENSPPYG00000013044	SF3B1	96	98.814	Pongo_abelii
ENSMNEG00000042333	SF3B1	100	99.847	ENSPCAG00000009292	SF3B1	100	99.847	Procavia_capensis
ENSMNEG00000042333	SF3B1	100	99.923	ENSPCOG00000024074	SF3B1	100	99.923	Propithecus_coquereli
ENSMNEG00000042333	SF3B1	100	100.000	ENSPVAG00000008302	SF3B1	100	100.000	Pteropus_vampyrus
ENSMNEG00000042333	SF3B1	100	94.264	ENSPNYG00000014939	sf3b1	100	92.629	Pundamilia_nyererei
ENSMNEG00000042333	SF3B1	100	95.291	ENSPNAG00000008288	sf3b1	100	93.997	Pygocentrus_nattereri
ENSMNEG00000042333	SF3B1	100	100.000	ENSRNOG00000013516	Sf3b1	100	100.000	Rattus_norvegicus
ENSMNEG00000042333	SF3B1	100	96.028	ENSRBIG00000026096	SF3B1	100	96.237	Rhinopithecus_bieti
ENSMNEG00000042333	SF3B1	100	100.000	ENSRROG00000031308	SF3B1	100	100.000	Rhinopithecus_roxellana
ENSMNEG00000042333	SF3B1	100	100.000	ENSSBOG00000020080	SF3B1	100	100.000	Saimiri_boliviensis_boliviensis
ENSMNEG00000042333	SF3B1	100	99.655	ENSSHAG00000017564	SF3B1	100	99.310	Sarcophilus_harrisii
ENSMNEG00000042333	SF3B1	100	95.637	ENSSFOG00015021535	sf3b1	100	94.761	Scleropages_formosus
ENSMNEG00000042333	SF3B1	99	94.364	ENSSMAG00000013977	sf3b1	99	92.803	Scophthalmus_maximus
ENSMNEG00000042333	SF3B1	100	94.863	ENSSDUG00000017422	sf3b1	100	93.389	Seriola_dumerili
ENSMNEG00000042333	SF3B1	100	94.777	ENSSLDG00000019495	sf3b1	100	93.313	Seriola_lalandi_dorsalis
ENSMNEG00000042333	SF3B1	79	100.000	ENSSARG00000007016	SF3B1	76	100.000	Sorex_araneus
ENSMNEG00000042333	SF3B1	100	99.223	ENSSPUG00000000410	SF3B1	100	99.080	Sphenodon_punctatus
ENSMNEG00000042333	SF3B1	100	95.034	ENSSPAG00000010451	sf3b1	99	93.693	Stegastes_partitus
ENSMNEG00000042333	SF3B1	100	100.000	ENSSSCG00000016075	SF3B1	100	100.000	Sus_scrofa
ENSMNEG00000042333	SF3B1	100	99.655	ENSTGUG00000010553	SF3B1	100	99.310	Taeniopygia_guttata
ENSMNEG00000042333	SF3B1	100	94.521	ENSTRUG00000015534	sf3b1	100	93.237	Takifugu_rubripes
ENSMNEG00000042333	SF3B1	88	100.000	ENSTBEG00000008714	SF3B1	93	100.000	Tupaia_belangeri
ENSMNEG00000042333	SF3B1	91	100.000	ENSTTRG00000003414	SF3B1	92	94.185	Tursiops_truncatus
ENSMNEG00000042333	SF3B1	94	95.826	ENSUAMG00000018506	SF3B1	99	99.190	Ursus_americanus
ENSMNEG00000042333	SF3B1	100	100.000	ENSUMAG00000020945	SF3B1	100	100.000	Ursus_maritimus
ENSMNEG00000042333	SF3B1	100	91.871	ENSVPAG00000005798	SF3B1	100	91.871	Vicugna_pacos
ENSMNEG00000042333	SF3B1	100	100.000	ENSVVUG00000025948	SF3B1	95	100.000	Vulpes_vulpes
ENSMNEG00000042333	SF3B1	100	97.755	ENSXETG00000013339	sf3b1	100	96.628	Xenopus_tropicalis
ENSMNEG00000042333	SF3B1	100	90.768	ENSXCOG00000018086	sf3b1	100	89.794	Xiphophorus_couchianus
ENSMNEG00000042333	SF3B1	100	94.692	ENSXMAG00000007369	sf3b1	100	93.692	Xiphophorus_maculatus