EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMNEG00000042856 (Gene tree)
Gene ID: 105467067
Gene Symbol: -
Alias: -
Full Name: matrin 3
Gene Type: protein_coding
Species: Macaca_nemestrina
Status: putative
Strand: Minus strand
Length: 37162 bases
Position: chrKQ007139.1:14376630-14413791
Accession: 105467067
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMNEP00000040370	RRM_5	PF13893.6	8.7e-07	1	2
ENSMNEP00000040370	RRM_5	PF13893.6	8.7e-07	2	2
ENSMNEP00000040470	RRM_5	PF13893.6	1.5e-06	1	1
ENSMNEP00000040360	RRM_5	PF13893.6	2.8e-06	1	1
ENSMNEP00000040475	RRM_5	PF13893.6	4.4e-06	1	1
ENSMNEP00000040439	RRM_5	PF13893.6	5.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMNET00000064931	-	2685	-	ENSMNEP00000040439	894 (aa)	-	A0A2K6DWZ5
ENSMNET00000064852	-	4100	XM_011716396	ENSMNEP00000040360	847 (aa)	XP_011714698	A0A2K6DWQ9
ENSMNET00000064967	-	2526	-	ENSMNEP00000040475	841 (aa)	-	A0A2K6DX24
ENSMNET00000064962	-	1656	-	ENSMNEP00000040470	551 (aa)	-	A0A2K6DX20
ENSMNET00000064862	-	3005	XM_011716402	ENSMNEP00000040370	559 (aa)	XP_011714704	A0A2K6DWR8
ENSMNET00000064945	-	867	-	ENSMNEP00000040453	288 (aa)	-	A0A2K6DX14

Gene Model

Click here to download ENSMNEG00000042856's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMNEG00000042856's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMNEG00000042856	-	52	56.000	ENSMNEG00000028987	ZNF638	74	31.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMNEG00000042856	-	100	99.646	ENSG00000015479	MATR3	100	100.000	Homo_sapiens
ENSMNEG00000042856	-	50	56.000	ENSG00000075292	ZNF638	57	31.492	Homo_sapiens
ENSMNEG00000042856	-	99	97.991	ENSAMEG00000011347	-	100	97.991	Ailuropoda_melanoleuca
ENSMNEG00000042856	-	100	80.916	ENSAPLG00000008118	-	100	79.716	Anas_platyrhynchos
ENSMNEG00000042856	-	99	72.348	ENSACAG00000016233	-	99	71.702	Anolis_carolinensis
ENSMNEG00000042856	-	84	73.095	ENSANAG00000024654	-	99	73.095	Aotus_nancymaae
ENSMNEG00000042856	-	100	99.174	ENSANAG00000022951	-	100	99.174	Aotus_nancymaae
ENSMNEG00000042856	-	81	38.095	ENSAMXG00000010685	matr3l1.1	85	39.706	Astyanax_mexicanus
ENSMNEG00000042856	-	96	33.484	ENSAMXG00000010681	matr3l1.1	74	48.148	Astyanax_mexicanus
ENSMNEG00000042856	-	100	97.512	ENSBTAG00000006756	MATR3	100	97.512	Bos_taurus
ENSMNEG00000042856	-	100	98.748	ENSCJAG00000006888	-	100	98.748	Callithrix_jacchus
ENSMNEG00000042856	-	100	98.704	ENSCAFG00000001345	MATR3	100	98.704	Canis_familiaris
ENSMNEG00000042856	-	100	97.393	ENSCAFG00020010504	-	100	97.393	Canis_lupus_dingo
ENSMNEG00000042856	-	100	98.940	ENSCHIG00000025746	-	100	98.940	Capra_hircus
ENSMNEG00000042856	-	100	99.055	ENSTSYG00000011028	-	100	99.055	Carlito_syrichta
ENSMNEG00000042856	-	99	98.818	ENSCPOG00000014076	-	99	98.818	Cavia_porcellus
ENSMNEG00000042856	-	100	99.528	ENSCCAG00000025074	-	100	99.528	Cebus_capucinus
ENSMNEG00000042856	-	51	47.692	ENSCCAG00000028170	ZNF638	74	32.044	Cebus_capucinus
ENSMNEG00000042856	-	100	99.821	ENSCATG00000041304	-	100	99.821	Cercocebus_atys
ENSMNEG00000042856	-	53	56.000	ENSCATG00000032207	ZNF638	74	31.667	Cercocebus_atys
ENSMNEG00000042856	-	99	99.054	ENSCLAG00000015998	-	99	99.054	Chinchilla_lanigera
ENSMNEG00000042856	-	100	99.882	ENSCSAG00000013075	-	100	99.882	Chlorocebus_sabaeus
ENSMNEG00000042856	-	100	79.956	ENSCPBG00000006303	-	100	79.847	Chrysemys_picta_bellii
ENSMNEG00000042856	-	50	56.000	ENSCANG00000014119	ZNF638	74	31.111	Colobus_angolensis_palliatus
ENSMNEG00000042856	-	100	99.881	ENSCANG00000028224	-	100	99.881	Colobus_angolensis_palliatus
ENSMNEG00000042856	-	100	98.701	ENSCGRG00001020227	Matr3	100	98.701	Cricetulus_griseus_chok1gshd
ENSMNEG00000042856	-	100	98.583	ENSCGRG00000011298	Matr3	100	98.583	Cricetulus_griseus_crigri
ENSMNEG00000042856	-	98	32.143	ENSCSEG00000012682	matr3l1.1	69	46.429	Cynoglossus_semilaevis
ENSMNEG00000042856	-	76	38.889	ENSCVAG00000005337	matr3l1.1	75	38.889	Cyprinodon_variegatus
ENSMNEG00000042856	-	100	97.439	ENSDNOG00000037723	-	100	97.439	Dasypus_novemcinctus
ENSMNEG00000042856	-	100	99.176	ENSEASG00005020857	-	100	99.176	Equus_asinus_asinus
ENSMNEG00000042856	-	100	99.058	ENSECAG00000012882	MATR3	100	99.058	Equus_caballus
ENSMNEG00000042856	-	94	30.022	ENSELUG00000021848	matr3l1.1	76	51.515	Esox_lucius
ENSMNEG00000042856	-	82	42.718	ENSELUG00000021651	si:ch211-271b14.1	95	42.718	Esox_lucius
ENSMNEG00000042856	-	100	99.058	ENSFCAG00000021911	-	100	99.058	Felis_catus
ENSMNEG00000042856	-	100	79.016	ENSFALG00000003071	-	100	78.798	Ficedula_albicollis
ENSMNEG00000042856	-	100	98.111	ENSFDAG00000017675	-	100	98.111	Fukomys_damarensis
ENSMNEG00000042856	-	100	80.504	ENSGALG00000002478	MATR3	100	79.299	Gallus_gallus
ENSMNEG00000042856	-	100	79.781	ENSGAGG00000011386	-	100	79.672	Gopherus_agassizii
ENSMNEG00000042856	-	50	56.000	ENSGGOG00000012511	ZNF638	74	32.044	Gorilla_gorilla
ENSMNEG00000042856	-	100	99.764	ENSGGOG00000007308	-	100	99.764	Gorilla_gorilla
ENSMNEG00000042856	-	100	99.292	ENSHGLG00000004673	MATR3	100	99.292	Heterocephalus_glaber_female
ENSMNEG00000042856	-	91	99.018	ENSHGLG00100006442	-	100	99.018	Heterocephalus_glaber_male
ENSMNEG00000042856	-	58	49.057	ENSHCOG00000013223	matr3l1.1	89	32.941	Hippocampus_comes
ENSMNEG00000042856	-	100	99.058	ENSSTOG00000014746	-	100	99.058	Ictidomys_tridecemlineatus
ENSMNEG00000042856	-	92	71.176	ENSJJAG00000011022	-	97	79.501	Jaculus_jaculus
ENSMNEG00000042856	-	100	97.875	ENSJJAG00000021710	-	100	97.875	Jaculus_jaculus
ENSMNEG00000042856	-	63	43.210	ENSLBEG00000018267	matr3l1.1	70	38.462	Labrus_bergylta
ENSMNEG00000042856	-	99	56.974	ENSLACG00000006743	-	99	58.369	Latimeria_chalumnae
ENSMNEG00000042856	-	52	56.000	ENSMFAG00000034359	ZNF638	74	31.667	Macaca_fascicularis
ENSMNEG00000042856	-	100	100.000	ENSMFAG00000000634	-	100	100.000	Macaca_fascicularis
ENSMNEG00000042856	-	60	97.024	ENSMMUG00000015963	-	99	97.024	Macaca_mulatta
ENSMNEG00000042856	-	100	100.000	ENSMMUG00000016741	MATR3	100	100.000	Macaca_mulatta
ENSMNEG00000042856	-	100	100.000	ENSMLEG00000041178	-	100	100.000	Mandrillus_leucophaeus
ENSMNEG00000042856	-	50	56.000	ENSMLEG00000037705	ZNF638	74	31.667	Mandrillus_leucophaeus
ENSMNEG00000042856	-	75	48.235	ENSMAMG00000013840	matr3l1.1	75	41.880	Mastacembelus_armatus
ENSMNEG00000042856	-	100	80.394	ENSMGAG00000001331	-	100	79.189	Meleagris_gallopavo
ENSMNEG00000042856	-	100	98.465	ENSMAUG00000011647	Matr3	100	98.465	Mesocricetus_auratus
ENSMNEG00000042856	-	95	98.124	ENSMICG00000012438	-	99	98.008	Microcebus_murinus
ENSMNEG00000042856	-	100	98.465	ENSMOCG00000015711	Matr3	100	98.465	Microtus_ochrogaster
ENSMNEG00000042856	-	100	91.335	ENSMODG00000011925	-	99	89.578	Monodelphis_domestica
ENSMNEG00000042856	-	100	98.583	MGP_CAROLIEiJ_G0022108	Matr3	100	98.583	Mus_caroli
ENSMNEG00000042856	-	100	98.583	ENSMUSG00000037236	Matr3	100	98.583	Mus_musculus
ENSMNEG00000042856	-	100	98.583	MGP_PahariEiJ_G0018842	Matr3	100	98.583	Mus_pahari
ENSMNEG00000042856	-	100	98.229	MGP_SPRETEiJ_G0023020	Matr3	100	98.229	Mus_spretus
ENSMNEG00000042856	-	100	97.454	ENSMPUG00000009297	-	100	97.454	Mustela_putorius_furo
ENSMNEG00000042856	-	100	97.765	ENSMLUG00000005798	-	99	97.765	Myotis_lucifugus
ENSMNEG00000042856	-	100	98.701	ENSNGAG00000017452	Matr3	100	98.701	Nannospalax_galili
ENSMNEG00000042856	-	51	56.000	ENSNLEG00000010274	ZNF638	74	31.492	Nomascus_leucogenys
ENSMNEG00000042856	-	100	100.000	ENSNLEG00000009093	-	100	100.000	Nomascus_leucogenys
ENSMNEG00000042856	-	99	92.680	ENSOPRG00000016511	-	100	92.680	Ochotona_princeps
ENSMNEG00000042856	-	99	98.700	ENSODEG00000003015	-	99	98.700	Octodon_degus
ENSMNEG00000042856	-	100	99.174	ENSOCUG00000026311	MATR3	100	99.174	Oryctolagus_cuniculus
ENSMNEG00000042856	-	71	37.879	ENSORLG00020009362	matr3l1.1	81	37.162	Oryzias_latipes_hni
ENSMNEG00000042856	-	63	48.148	ENSORLG00015018551	matr3l1.1	81	37.333	Oryzias_latipes_hsok
ENSMNEG00000042856	-	71	32.812	ENSOMEG00000022287	matr3l1.1	80	33.333	Oryzias_melastigma
ENSMNEG00000042856	-	100	99.764	ENSOGAG00000010607	-	100	99.764	Otolemur_garnettii
ENSMNEG00000042856	-	100	98.940	ENSOARG00000016931	-	99	98.940	Ovis_aries
ENSMNEG00000042856	-	50	56.000	ENSPPAG00000039298	ZNF638	74	31.492	Pan_paniscus
ENSMNEG00000042856	-	100	91.950	ENSPPAG00000026720	-	99	93.796	Pan_paniscus
ENSMNEG00000042856	-	100	99.463	ENSPPAG00000001418	-	100	99.463	Pan_paniscus
ENSMNEG00000042856	-	100	99.176	ENSPPRG00000008004	-	100	99.176	Panthera_pardus
ENSMNEG00000042856	-	98	98.004	ENSPTIG00000010711	-	100	99.261	Panthera_tigris_altaica
ENSMNEG00000042856	-	50	56.000	ENSPTRG00000012048	ZNF638	74	31.492	Pan_troglodytes
ENSMNEG00000042856	-	100	99.463	ENSPTRG00000017294	MATR3	100	99.463	Pan_troglodytes
ENSMNEG00000042856	-	99	98.201	ENSPANG00000032489	-	99	99.635	Papio_anubis
ENSMNEG00000042856	-	50	56.000	ENSPANG00000016789	ZNF638	74	31.667	Papio_anubis
ENSMNEG00000042856	-	100	100.000	ENSPANG00000012018	-	100	100.000	Papio_anubis
ENSMNEG00000042856	-	96	34.559	ENSPKIG00000000333	matr3l1.1	68	41.379	Paramormyrops_kingsleyae
ENSMNEG00000042856	-	100	80.306	ENSPSIG00000014598	-	100	80.197	Pelodiscus_sinensis
ENSMNEG00000042856	-	100	98.111	ENSPEMG00000020679	Matr3	100	98.111	Peromyscus_maniculatus_bairdii
ENSMNEG00000042856	-	100	98.659	ENSPPYG00000015835	-	100	98.659	Pongo_abelii
ENSMNEG00000042856	-	100	99.174	ENSPCOG00000025718	-	100	99.174	Propithecus_coquereli
ENSMNEG00000042856	-	99	97.738	ENSPVAG00000015431	-	100	97.952	Pteropus_vampyrus
ENSMNEG00000042856	-	52	46.512	ENSPNYG00000015855	-	96	37.647	Pundamilia_nyererei
ENSMNEG00000042856	-	52	59.016	ENSPNAG00000030007	si:ch211-271b14.1	56	59.016	Pygocentrus_nattereri
ENSMNEG00000042856	-	100	98.111	ENSRNOG00000019875	Matr3	100	98.111	Rattus_norvegicus
ENSMNEG00000042856	-	50	56.000	ENSRBIG00000029826	ZNF638	74	31.667	Rhinopithecus_bieti
ENSMNEG00000042856	-	100	100.000	ENSRBIG00000034713	-	100	100.000	Rhinopithecus_bieti
ENSMNEG00000042856	-	100	98.111	ENSRROG00000043949	-	100	98.111	Rhinopithecus_roxellana
ENSMNEG00000042856	-	51	56.000	ENSRROG00000045431	ZNF638	74	32.222	Rhinopithecus_roxellana
ENSMNEG00000042856	-	100	100.000	ENSRROG00000039415	-	100	100.000	Rhinopithecus_roxellana
ENSMNEG00000042856	-	100	99.410	ENSSBOG00000030159	-	100	99.410	Saimiri_boliviensis_boliviensis
ENSMNEG00000042856	-	51	47.692	ENSSBOG00000029960	ZNF638	74	32.044	Saimiri_boliviensis_boliviensis
ENSMNEG00000042856	-	100	91.452	ENSSHAG00000010331	-	99	89.696	Sarcophilus_harrisii
ENSMNEG00000042856	-	64	55.556	ENSSDUG00000015369	matr3l1.1	60	51.471	Seriola_dumerili
ENSMNEG00000042856	-	99	79.212	ENSSPUG00000019236	-	99	78.838	Sphenodon_punctatus
ENSMNEG00000042856	-	100	99.058	ENSSSCG00000014343	-	100	99.058	Sus_scrofa
ENSMNEG00000042856	-	99	79.956	ENSTGUG00000014568	MATR3	99	78.970	Taeniopygia_guttata
ENSMNEG00000042856	-	51	37.327	ENSTRUG00000001692	-	73	39.665	Takifugu_rubripes
ENSMNEG00000042856	-	76	57.143	ENSTNIG00000003166	matr3l1.1	85	57.143	Tetraodon_nigroviridis
ENSMNEG00000042856	-	85	99.026	ENSUAMG00000000097	-	97	99.026	Ursus_americanus
ENSMNEG00000042856	-	100	98.587	ENSUMAG00000015808	-	100	98.587	Ursus_maritimus
ENSMNEG00000042856	-	100	97.108	ENSVPAG00000006337	-	100	97.108	Vicugna_pacos
ENSMNEG00000042856	-	100	98.940	ENSVVUG00000020287	-	100	98.940	Vulpes_vulpes
ENSMNEG00000042856	-	100	54.881	ENSXETG00000003838	matr3	99	54.407	Xenopus_tropicalis
ENSMNEG00000042856	-	68	34.343	ENSXMAG00000014107	-	70	57.143	Xiphophorus_maculatus