EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMNEG00000043054 (Gene tree)
Gene ID
105494781
Gene Symbol
PABPC4
Alias
APP-1|iPABP
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Macaca_nemestrina
Status
putative
Strand
Minus strand
Length
50631 bases
Position
chrKQ005701.1:19134971-19185601
Accession
105494781
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMNEP00000040378PABPPF00658.182.6e-3111
ENSMNEP00000040371PABPPF00658.182.9e-3111
ENSMNEP00000040378RRM_5PF13893.68.7e-0911
ENSMNEP00000040371RRM_5PF13893.61.1e-0811
ENSMNEP00000040378RRM_1PF00076.221.1e-9114
ENSMNEP00000040378RRM_1PF00076.221.1e-9124
ENSMNEP00000040378RRM_1PF00076.221.1e-9134
ENSMNEP00000040378RRM_1PF00076.221.1e-9144
ENSMNEP00000040371RRM_1PF00076.221.4e-9114
ENSMNEP00000040371RRM_1PF00076.221.4e-9124
ENSMNEP00000040371RRM_1PF00076.221.4e-9134
ENSMNEP00000040371RRM_1PF00076.221.4e-9144
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMNET00000064863PABPC4-2015169XM_011763601ENSMNEP00000040371660 (aa)XP_011761903A0A2K6DWS0
ENSMNET00000064870PABPC4-2023126XM_011763603ENSMNEP00000040378631 (aa)XP_011761905A0A2K6DWU1
Gene Model
Click here to download ENSMNEG00000043054's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMNEG00000043054's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMNEG00000043054PABPC49957.323ENSMNEG00000007852-9957.323
ENSMNEG00000043054PABPC45830.387ENSMNEG00000036970RBM285730.688
ENSMNEG00000043054PABPC45431.481ENSMNEG00000015863HNRNPA05032.450
ENSMNEG00000043054PABPC49684.086ENSMNEG00000009340-9884.086
ENSMNEG00000043054PABPC49865.378ENSMNEG00000032298PABPC1L9965.916
ENSMNEG00000043054PABPC45876.650ENSMNEG00000037732-9976.650
ENSMNEG00000043054PABPC49974.259ENSMNEG00000042936PABPC39974.022
ENSMNEG00000043054PABPC46034.722ENSMNEG00000043973ELAVL39233.735
ENSMNEG00000043054PABPC45730.189ENSMNEG00000030316TIA18530.189
ENSMNEG00000043054PABPC45730.220ENSMNEG00000032245TIAL18735.043
ENSMNEG00000043054PABPC45931.579ENSMNEG00000032526ELAVL28934.940
ENSMNEG00000043054PABPC46030.605ENSMNEG00000028431ELAVL19430.605
ENSMNEG00000043054PABPC49876.034ENSMNEG00000010564-9975.690
ENSMNEG00000043054PABPC45930.921ENSMNEG00000035576ELAVL48830.921
ENSMNEG00000043054PABPC46067.135ENSMNEG00000037604PABPC59666.942
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMNEG00000043054PABPC410099.697ENSG00000090621PABPC4100100.000Homo_sapiens
ENSMNEG00000043054PABPC49983.360ENSAPOG00000001161pabpc410082.453Acanthochromis_polyacanthus
ENSMNEG00000043054PABPC49857.717ENSAMEG00000015083-9957.395Ailuropoda_melanoleuca
ENSMNEG00000043054PABPC410098.939ENSAMEG00000011535-10098.939Ailuropoda_melanoleuca
ENSMNEG00000043054PABPC410083.438ENSACIG00000023343pabpc410084.062Amphilophus_citrinellus
ENSMNEG00000043054PABPC49983.360ENSAOCG00000021529pabpc410090.807Amphiprion_ocellaris
ENSMNEG00000043054PABPC49983.360ENSAPEG00000019196pabpc410083.594Amphiprion_percula
ENSMNEG00000043054PABPC49982.464ENSATEG00000007402pabpc410082.426Anabas_testudineus
ENSMNEG00000043054PABPC49991.270ENSAPLG00000009729-10091.270Anas_platyrhynchos
ENSMNEG00000043054PABPC49989.982ENSACAG00000002544PABPC410089.982Anolis_carolinensis
ENSMNEG00000043054PABPC410099.545ENSANAG00000025079PABPC410099.545Aotus_nancymaae
ENSMNEG00000043054PABPC410083.125ENSACLG00000019558pabpc410083.204Astatotilapia_calliptera
ENSMNEG00000043054PABPC49978.922ENSAMXG00000018779pabpc49979.556Astyanax_mexicanus
ENSMNEG00000043054PABPC410096.520ENSBTAG00000017125PABPC410096.520Bos_taurus
ENSMNEG00000043054PABPC45786.826ENSBTAG00000048536-9886.826Bos_taurus
ENSMNEG00000043054PABPC47790.123ENSCJAG00000045953-9290.123Callithrix_jacchus
ENSMNEG00000043054PABPC410099.394ENSCJAG00000002512-10099.394Callithrix_jacchus
ENSMNEG00000043054PABPC410099.208ENSCAFG00000003081PABPC410099.208Canis_familiaris
ENSMNEG00000043054PABPC410099.091ENSCAFG00020004161PABPC410099.091Canis_lupus_dingo
ENSMNEG00000043054PABPC410076.364ENSCHIG00000023385-10076.364Capra_hircus
ENSMNEG00000043054PABPC410098.939ENSCHIG00000019398-10098.939Capra_hircus
ENSMNEG00000043054PABPC410099.394ENSTSYG00000006532PABPC410099.394Carlito_syrichta
ENSMNEG00000043054PABPC49999.392ENSCAPG00000015984PABPC410099.392Cavia_aperea
ENSMNEG00000043054PABPC410099.394ENSCPOG00000009552PABPC410099.394Cavia_porcellus
ENSMNEG00000043054PABPC410099.545ENSCCAG00000037306PABPC410099.545Cebus_capucinus
ENSMNEG00000043054PABPC410099.848ENSCATG00000042164PABPC410099.848Cercocebus_atys
ENSMNEG00000043054PABPC410099.242ENSCLAG00000011899PABPC410099.242Chinchilla_lanigera
ENSMNEG00000043054PABPC410099.848ENSCSAG00000001135PABPC410099.848Chlorocebus_sabaeus
ENSMNEG00000043054PABPC48697.625ENSCHOG00000005327PABPC48197.625Choloepus_hoffmanni
ENSMNEG00000043054PABPC49991.587ENSCPBG00000001038PABPC410091.587Chrysemys_picta_bellii
ENSMNEG00000043054PABPC49999.693ENSCANG00000034177PABPC410099.693Colobus_angolensis_palliatus
ENSMNEG00000043054PABPC410097.289ENSCGRG00001018166Pabpc410097.289Cricetulus_griseus_chok1gshd
ENSMNEG00000043054PABPC49994.809ENSCGRG00000009777Pabpc410094.809Cricetulus_griseus_crigri
ENSMNEG00000043054PABPC410082.188ENSCSEG00000000130pabpc410082.426Cynoglossus_semilaevis
ENSMNEG00000043054PABPC49983.625ENSCVAG00000019246pabpc410083.861Cyprinodon_variegatus
ENSMNEG00000043054PABPC49984.921ENSDARG00000059259pabpc410085.691Danio_rerio
ENSMNEG00000043054PABPC49999.464ENSDNOG00000018444-10099.464Dasypus_novemcinctus
ENSMNEG00000043054PABPC410096.970ENSDORG00000011581Pabpc410096.970Dipodomys_ordii
ENSMNEG00000043054PABPC4100100.000ENSETEG00000018453-84100.000Echinops_telfairi
ENSMNEG00000043054PABPC48665.185ENSETEG00000009172-9965.201Echinops_telfairi
ENSMNEG00000043054PABPC49776.898ENSEBUG00000013782pabpc49976.108Eptatretus_burgeri
ENSMNEG00000043054PABPC49976.582ENSEBUG00000000992pabpc49980.346Eptatretus_burgeri
ENSMNEG00000043054PABPC410099.545ENSEASG00005014119PABPC410099.545Equus_asinus_asinus
ENSMNEG00000043054PABPC410099.545ENSECAG00000009396PABPC410099.545Equus_caballus
ENSMNEG00000043054PABPC410096.364ENSEEUG00000002962PABPC410096.364Erinaceus_europaeus
ENSMNEG00000043054PABPC49983.599ENSELUG00000003195pabpc49884.177Esox_lucius
ENSMNEG00000043054PABPC410099.242ENSFCAG00000015254-10099.242Felis_catus
ENSMNEG00000043054PABPC49990.794ENSFALG00000000543PABPC410090.794Ficedula_albicollis
ENSMNEG00000043054PABPC410099.394ENSFDAG00000020016-10099.394Fukomys_damarensis
ENSMNEG00000043054PABPC49067.490ENSFDAG00000010581-10063.361Fukomys_damarensis
ENSMNEG00000043054PABPC410083.412ENSFHEG00000007548pabpc49688.578Fundulus_heteroclitus
ENSMNEG00000043054PABPC49982.965ENSGMOG00000019025pabpc49983.596Gadus_morhua
ENSMNEG00000043054PABPC49991.587ENSGALG00000003800PABPC410091.587Gallus_gallus
ENSMNEG00000043054PABPC49990.566ENSGAFG00000018195pabpc49895.556Gambusia_affinis
ENSMNEG00000043054PABPC410081.591ENSGACG00000007179pabpc410082.215Gasterosteus_aculeatus
ENSMNEG00000043054PABPC49991.429ENSGAGG00000001888PABPC410091.429Gopherus_agassizii
ENSMNEG00000043054PABPC410099.697ENSGGOG00000004002PABPC410099.697Gorilla_gorilla
ENSMNEG00000043054PABPC410083.281ENSHBUG00000020206pabpc410083.359Haplochromis_burtoni
ENSMNEG00000043054PABPC410099.545ENSHGLG00000011162PABPC410099.545Heterocephalus_glaber_female
ENSMNEG00000043054PABPC410099.525ENSHGLG00100001580PABPC410099.525Heterocephalus_glaber_male
ENSMNEG00000043054PABPC410082.316ENSHCOG00000012694pabpc410082.942Hippocampus_comes
ENSMNEG00000043054PABPC49883.146ENSIPUG00000016620pabpc49983.176Ictalurus_punctatus
ENSMNEG00000043054PABPC410096.970ENSSTOG00000010416PABPC410096.970Ictidomys_tridecemlineatus
ENSMNEG00000043054PABPC410094.848ENSJJAG00000007781Pabpc410094.848Jaculus_jaculus
ENSMNEG00000043054PABPC49982.520ENSKMAG00000013597pabpc49982.188Kryptolebias_marmoratus
ENSMNEG00000043054PABPC410082.426ENSLBEG00000013654pabpc410082.143Labrus_bergylta
ENSMNEG00000043054PABPC49988.013ENSLACG00000011907PABPC410088.013Latimeria_chalumnae
ENSMNEG00000043054PABPC49985.512ENSLOCG00000001877pabpc49986.299Lepisosteus_oculatus
ENSMNEG00000043054PABPC410099.091ENSLAFG00000000151PABPC410099.091Loxodonta_africana
ENSMNEG00000043054PABPC410099.848ENSMFAG00000041481PABPC410099.848Macaca_fascicularis
ENSMNEG00000043054PABPC410099.848ENSMMUG00000007497PABPC410099.848Macaca_mulatta
ENSMNEG00000043054PABPC410099.848ENSMLEG00000040716PABPC410099.848Mandrillus_leucophaeus
ENSMNEG00000043054PABPC49983.043ENSMAMG00000010025pabpc49982.059Mastacembelus_armatus
ENSMNEG00000043054PABPC410082.969ENSMZEG00005006141pabpc410083.048Maylandia_zebra
ENSMNEG00000043054PABPC49987.734ENSMGAG00000005408PABPC410087.734Meleagris_gallopavo
ENSMNEG00000043054PABPC47795.413ENSMAUG00000019763-8495.413Mesocricetus_auratus
ENSMNEG00000043054PABPC47289.423ENSMAUG00000001295-9789.423Mesocricetus_auratus
ENSMNEG00000043054PABPC45783.234ENSMAUG00000004089-9281.287Mesocricetus_auratus
ENSMNEG00000043054PABPC48996.441ENSMICG00000016633-10096.441Microcebus_murinus
ENSMNEG00000043054PABPC49984.725ENSMICG00000036729-10085.435Microcebus_murinus
ENSMNEG00000043054PABPC410097.741ENSMOCG00000006763Pabpc410097.741Microtus_ochrogaster
ENSMNEG00000043054PABPC410080.189ENSMMOG00000002363pabpc49979.507Mola_mola
ENSMNEG00000043054PABPC45974.011ENSMODG00000018051-9174.011Monodelphis_domestica
ENSMNEG00000043054PABPC49889.352ENSMODG00000017657-10088.939Monodelphis_domestica
ENSMNEG00000043054PABPC49982.622ENSMALG00000011017pabpc410082.326Monopterus_albus
ENSMNEG00000043054PABPC49983.729MGP_CAROLIEiJ_G0024864-10083.729Mus_caroli
ENSMNEG00000043054PABPC410097.424MGP_CAROLIEiJ_G0026435-10099.291Mus_caroli
ENSMNEG00000043054PABPC410097.879ENSMUSG00000011257Pabpc410099.405Mus_musculus
ENSMNEG00000043054PABPC49997.696MGP_PahariEiJ_G0028765Pabpc4100100.000Mus_pahari
ENSMNEG00000043054PABPC49978.603MGP_SPRETEiJ_G0027415Pabpc410099.291Mus_spretus
ENSMNEG00000043054PABPC49553.642ENSMPUG00000006836-10053.477Mustela_putorius_furo
ENSMNEG00000043054PABPC410099.242ENSMPUG00000014414-10099.242Mustela_putorius_furo
ENSMNEG00000043054PABPC410096.513ENSMLUG00000012068PABPC410096.513Myotis_lucifugus
ENSMNEG00000043054PABPC410096.818ENSNGAG00000018292Pabpc410096.818Nannospalax_galili
ENSMNEG00000043054PABPC46786.441ENSNBRG00000010047-7586.441Neolamprologus_brichardi
ENSMNEG00000043054PABPC45992.788ENSNBRG00000009708pabpc49892.788Neolamprologus_brichardi
ENSMNEG00000043054PABPC410099.842ENSNLEG00000011928PABPC410099.842Nomascus_leucogenys
ENSMNEG00000043054PABPC48598.737ENSOPRG00000011984PABPC48798.737Ochotona_princeps
ENSMNEG00000043054PABPC49989.528ENSODEG00000017434-10089.409Octodon_degus
ENSMNEG00000043054PABPC410098.636ENSODEG00000006592-10098.636Octodon_degus
ENSMNEG00000043054PABPC45385.714ENSODEG00000013457-10085.714Octodon_degus
ENSMNEG00000043054PABPC410083.281ENSONIG00000008176pabpc410083.906Oreochromis_niloticus
ENSMNEG00000043054PABPC49991.270ENSOANG00000010001PABPC410091.270Ornithorhynchus_anatinus
ENSMNEG00000043054PABPC49699.209ENSOCUG00000000562PABPC48899.209Oryctolagus_cuniculus
ENSMNEG00000043054PABPC49991.049ENSORLG00000017479pabpc49991.049Oryzias_latipes
ENSMNEG00000043054PABPC49991.049ENSORLG00020018644pabpc49991.049Oryzias_latipes_hni
ENSMNEG00000043054PABPC49991.049ENSORLG00015015042pabpc49991.049Oryzias_latipes_hsok
ENSMNEG00000043054PABPC49983.043ENSOMEG00000014410pabpc49983.491Oryzias_melastigma
ENSMNEG00000043054PABPC410096.833ENSOGAG00000004067PABPC410096.833Otolemur_garnettii
ENSMNEG00000043054PABPC410098.939ENSOARG00000020060PABPC410098.939Ovis_aries
ENSMNEG00000043054PABPC410099.697ENSPPAG00000043625PABPC410099.697Pan_paniscus
ENSMNEG00000043054PABPC410099.242ENSPPRG00000024727PABPC410099.242Panthera_pardus
ENSMNEG00000043054PABPC410099.242ENSPTIG00000005829PABPC410099.242Panthera_tigris_altaica
ENSMNEG00000043054PABPC410099.697ENSPTRG00000000573PABPC410099.697Pan_troglodytes
ENSMNEG00000043054PABPC410099.697ENSPANG00000009484PABPC410099.697Papio_anubis
ENSMNEG00000043054PABPC49984.810ENSPKIG00000025356pabpc49985.443Paramormyrops_kingsleyae
ENSMNEG00000043054PABPC49991.587ENSPSIG00000016892PABPC410091.587Pelodiscus_sinensis
ENSMNEG00000043054PABPC410081.732ENSPMGG00000009073pabpc49981.476Periophthalmus_magnuspinnatus
ENSMNEG00000043054PABPC410091.061ENSPEMG00000024193-9991.061Peromyscus_maniculatus_bairdii
ENSMNEG00000043054PABPC410097.273ENSPEMG00000023569-9997.273Peromyscus_maniculatus_bairdii
ENSMNEG00000043054PABPC48973.484ENSPMAG00000002836pabpc410073.196Petromyzon_marinus
ENSMNEG00000043054PABPC49771.311ENSPMAG00000007885pabpc410069.822Petromyzon_marinus
ENSMNEG00000043054PABPC49892.880ENSPCIG00000020674PABPC410093.810Phascolarctos_cinereus
ENSMNEG00000043054PABPC410082.786ENSPFOG00000002682pabpc410082.919Poecilia_formosa
ENSMNEG00000043054PABPC410082.629ENSPLAG00000010112pabpc410083.333Poecilia_latipinna
ENSMNEG00000043054PABPC49983.307ENSPMEG00000019739pabpc410083.075Poecilia_mexicana
ENSMNEG00000043054PABPC410083.447ENSPREG00000001589pabpc410083.447Poecilia_reticulata
ENSMNEG00000043054PABPC410099.697ENSPPYG00000001506PABPC410099.697Pongo_abelii
ENSMNEG00000043054PABPC410094.242ENSPCAG00000003341PABPC410094.242Procavia_capensis
ENSMNEG00000043054PABPC49982.003ENSPCOG00000025882-9594.059Propithecus_coquereli
ENSMNEG00000043054PABPC410099.546ENSPCOG00000023725-10099.546Propithecus_coquereli
ENSMNEG00000043054PABPC49998.655ENSPVAG00000002187PABPC410098.655Pteropus_vampyrus
ENSMNEG00000043054PABPC410083.125ENSPNYG00000006134pabpc410083.204Pundamilia_nyererei
ENSMNEG00000043054PABPC410083.307ENSPNAG00000024355pabpc410084.038Pygocentrus_nattereri
ENSMNEG00000043054PABPC410095.606ENSRNOG00000015642Pabpc410095.606Rattus_norvegicus
ENSMNEG00000043054PABPC410093.485ENSRNOG00000028592AABR07035074.110093.485Rattus_norvegicus
ENSMNEG00000043054PABPC410099.848ENSRBIG00000039761PABPC410099.848Rhinopithecus_bieti
ENSMNEG00000043054PABPC410099.848ENSRROG00000033355PABPC410099.848Rhinopithecus_roxellana
ENSMNEG00000043054PABPC410099.394ENSSBOG00000026193PABPC410099.394Saimiri_boliviensis_boliviensis
ENSMNEG00000043054PABPC49892.718ENSSHAG00000018139PABPC410092.222Sarcophilus_harrisii
ENSMNEG00000043054PABPC49985.714ENSSFOG00015023514pabpc49985.714Scleropages_formosus
ENSMNEG00000043054PABPC49982.278ENSSMAG00000009007pabpc49982.104Scophthalmus_maximus
ENSMNEG00000043054PABPC49982.567ENSSDUG00000012683pabpc49588.046Seriola_dumerili
ENSMNEG00000043054PABPC49982.567ENSSLDG00000013025pabpc410082.812Seriola_lalandi_dorsalis
ENSMNEG00000043054PABPC410091.970ENSSARG00000000310PABPC410091.970Sorex_araneus
ENSMNEG00000043054PABPC49989.841ENSSPUG00000003204PABPC410089.841Sphenodon_punctatus
ENSMNEG00000043054PABPC49990.562ENSSPAG00000009252pabpc49983.019Stegastes_partitus
ENSMNEG00000043054PABPC48950.168ENSSSCG00000036170-9650.168Sus_scrofa
ENSMNEG00000043054PABPC410099.091ENSSSCG00000003660-10099.091Sus_scrofa
ENSMNEG00000043054PABPC49987.443ENSTGUG00000001266PABPC410087.443Taeniopygia_guttata
ENSMNEG00000043054PABPC410081.918ENSTRUG00000005907pabpc49982.003Takifugu_rubripes
ENSMNEG00000043054PABPC410078.056ENSTNIG00000016902pabpc49978.056Tetraodon_nigroviridis
ENSMNEG00000043054PABPC49988.403ENSTBEG00000009035PABPC410088.403Tupaia_belangeri
ENSMNEG00000043054PABPC49983.142ENSTTRG00000014340PABPC410086.891Tursiops_truncatus
ENSMNEG00000043054PABPC410099.049ENSUAMG00000000303PABPC410099.049Ursus_americanus
ENSMNEG00000043054PABPC410098.939ENSUMAG00000019585PABPC410099.057Ursus_maritimus
ENSMNEG00000043054PABPC48497.163ENSVPAG00000010041PABPC47797.163Vicugna_pacos
ENSMNEG00000043054PABPC410099.208ENSVVUG00000005215PABPC410099.208Vulpes_vulpes
ENSMNEG00000043054PABPC45997.024ENSXETG00000027221-10097.024Xenopus_tropicalis
ENSMNEG00000043054PABPC49983.492ENSXETG00000010946pabpc410083.492Xenopus_tropicalis
ENSMNEG00000043054PABPC49989.351ENSXCOG00000013190pabpc49690.094Xiphophorus_couchianus
ENSMNEG00000043054PABPC410082.942ENSXMAG00000019007pabpc410083.178Xiphophorus_maculatus

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