EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMNEG00000043313 (Gene tree)
Gene ID: 105465397
Gene Symbol: POLR1A
Alias: DKFZP586M0122|FLJ21915|RPA1|RPO1-4
Full Name: RNA polymerase I subunit A
Gene Type: protein_coding
Species: Macaca_nemestrina
Status: putative
Strand: Minus strand
Length: 83193 bases
Position: chrKQ006730.1:55187464-55270656
Accession: 105465397
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMNEP00000040975	RNA_pol_Rpb1_5	PF04998.17	6.6e-104	1	1
ENSMNEP00000040975	RNA_pol_Rpb1_4	PF05000.17	1.4e-25	1	1
ENSMNEP00000040975	RNA_pol_Rpb1_2	PF00623.20	1.9e-70	1	1
ENSMNEP00000040975	RNA_pol_Rpb1_3	PF04983.18	1e-35	1	1
ENSMNEP00000040975	RNA_pol_Rpb1_1	PF04997.12	1.5e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMNET00000065470	POLR1A-201	8670	XM_011713846	ENSMNEP00000040975	1720 (aa)	XP_011712148	A0A2K6DYI6

Gene Model

Click here to download ENSMNEG00000043313's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMNEG00000043313's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMNEG00000043313	POLR1A	62	32.095	ENSMNEG00000035163	POLR3A	71	32.831
ENSMNEG00000043313	POLR1A	82	30.769	ENSMNEG00000040407	-	58	51.899

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMNEG00000043313	POLR1A	100	97.733	ENSG00000068654	POLR1A	100	97.733	Homo_sapiens
ENSMNEG00000043313	POLR1A	69	67.845	ENSAPOG00000017945	polr1a	99	68.182	Acanthochromis_polyacanthus
ENSMNEG00000043313	POLR1A	100	91.628	ENSAMEG00000005807	POLR1A	100	92.623	Ailuropoda_melanoleuca
ENSMNEG00000043313	POLR1A	100	63.594	ENSACIG00000022147	polr1a	100	62.841	Amphilophus_citrinellus
ENSMNEG00000043313	POLR1A	100	65.767	ENSAOCG00000017336	polr1a	100	68.239	Amphiprion_ocellaris
ENSMNEG00000043313	POLR1A	95	74.306	ENSAPEG00000016105	polr1a	98	74.306	Amphiprion_percula
ENSMNEG00000043313	POLR1A	100	66.532	ENSATEG00000016773	polr1a	100	65.723	Anabas_testudineus
ENSMNEG00000043313	POLR1A	86	73.171	ENSAPLG00000013871	POLR1A	99	73.171	Anas_platyrhynchos
ENSMNEG00000043313	POLR1A	99	69.700	ENSACAG00000012141	POLR1A	99	68.772	Anolis_carolinensis
ENSMNEG00000043313	POLR1A	100	95.116	ENSANAG00000033927	POLR1A	100	94.942	Aotus_nancymaae
ENSMNEG00000043313	POLR1A	100	62.212	ENSACLG00000020541	polr1a	100	61.600	Astatotilapia_calliptera
ENSMNEG00000043313	POLR1A	100	90.413	ENSBTAG00000006481	POLR1A	100	90.413	Bos_taurus
ENSMNEG00000043313	POLR1A	99	38.354	WBGene00012999	rpoa-1	98	38.012	Caenorhabditis_elegans
ENSMNEG00000043313	POLR1A	100	94.826	ENSCJAG00000019547	POLR1A	100	94.826	Callithrix_jacchus
ENSMNEG00000043313	POLR1A	100	91.004	ENSCAFG00000007613	POLR1A	100	90.877	Canis_familiaris
ENSMNEG00000043313	POLR1A	100	90.799	ENSCAFG00020014752	POLR1A	100	90.672	Canis_lupus_dingo
ENSMNEG00000043313	POLR1A	100	88.355	ENSCHIG00000018204	POLR1A	100	88.297	Capra_hircus
ENSMNEG00000043313	POLR1A	100	90.529	ENSTSYG00000002761	POLR1A	100	90.122	Carlito_syrichta
ENSMNEG00000043313	POLR1A	97	84.317	ENSCAPG00000010132	POLR1A	100	83.990	Cavia_aperea
ENSMNEG00000043313	POLR1A	100	88.850	ENSCPOG00000012350	POLR1A	100	88.676	Cavia_porcellus
ENSMNEG00000043313	POLR1A	100	95.407	ENSCCAG00000019839	POLR1A	100	95.407	Cebus_capucinus
ENSMNEG00000043313	POLR1A	100	99.651	ENSCATG00000029786	POLR1A	100	99.651	Cercocebus_atys
ENSMNEG00000043313	POLR1A	100	89.333	ENSCLAG00000005187	POLR1A	100	88.870	Chinchilla_lanigera
ENSMNEG00000043313	POLR1A	100	99.419	ENSCSAG00000016251	POLR1A	100	99.419	Chlorocebus_sabaeus
ENSMNEG00000043313	POLR1A	99	74.332	ENSCPBG00000001115	POLR1A	99	74.375	Chrysemys_picta_bellii
ENSMNEG00000043313	POLR1A	99	47.045	ENSCSAVG00000007184	-	99	46.784	Ciona_savignyi
ENSMNEG00000043313	POLR1A	100	96.165	ENSCANG00000031785	POLR1A	100	96.165	Colobus_angolensis_palliatus
ENSMNEG00000043313	POLR1A	96	89.507	ENSCGRG00001006651	Polr1a	100	83.034	Cricetulus_griseus_chok1gshd
ENSMNEG00000043313	POLR1A	60	86.224	ENSCGRG00000010834	Polr1a	100	86.654	Cricetulus_griseus_crigri
ENSMNEG00000043313	POLR1A	100	62.181	ENSCSEG00000020190	polr1a	100	62.007	Cynoglossus_semilaevis
ENSMNEG00000043313	POLR1A	100	64.551	ENSCVAG00000020941	polr1a	100	65.122	Cyprinodon_variegatus
ENSMNEG00000043313	POLR1A	100	66.918	ENSDARG00000098375	polr1a	100	66.589	Danio_rerio
ENSMNEG00000043313	POLR1A	100	83.362	ENSDNOG00000010829	POLR1A	100	82.841	Dasypus_novemcinctus
ENSMNEG00000043313	POLR1A	100	87.854	ENSDORG00000008298	Polr1a	100	87.681	Dipodomys_ordii
ENSMNEG00000043313	POLR1A	80	44.341	FBgn0019938	RpI1	99	43.180	Drosophila_melanogaster
ENSMNEG00000043313	POLR1A	72	100.000	ENSETEG00000000412	-	72	100.000	Echinops_telfairi
ENSMNEG00000043313	POLR1A	88	66.667	ENSEBUG00000005667	-	99	66.667	Eptatretus_burgeri
ENSMNEG00000043313	POLR1A	100	92.384	ENSEASG00005001625	POLR1A	100	92.384	Equus_asinus_asinus
ENSMNEG00000043313	POLR1A	100	92.384	ENSECAG00000010092	POLR1A	100	93.451	Equus_caballus
ENSMNEG00000043313	POLR1A	100	92.384	ENSECAG00000030510	-	100	93.451	Equus_caballus
ENSMNEG00000043313	POLR1A	100	92.384	ENSECAG00000036306	-	100	93.451	Equus_caballus
ENSMNEG00000043313	POLR1A	81	94.681	ENSEEUG00000000676	POLR1A	81	94.444	Erinaceus_europaeus
ENSMNEG00000043313	POLR1A	100	67.187	ENSELUG00000012769	polr1a	99	67.187	Esox_lucius
ENSMNEG00000043313	POLR1A	100	91.860	ENSFCAG00000008966	POLR1A	100	91.686	Felis_catus
ENSMNEG00000043313	POLR1A	99	71.202	ENSFALG00000010082	POLR1A	99	70.303	Ficedula_albicollis
ENSMNEG00000043313	POLR1A	100	89.141	ENSFDAG00000013726	POLR1A	100	88.386	Fukomys_damarensis
ENSMNEG00000043313	POLR1A	100	62.101	ENSFHEG00000005996	polr1a	100	61.921	Fundulus_heteroclitus
ENSMNEG00000043313	POLR1A	100	59.907	ENSGMOG00000002230	polr1a	100	59.640	Gadus_morhua
ENSMNEG00000043313	POLR1A	90	69.621	ENSGALG00000038160	-	99	69.750	Gallus_gallus
ENSMNEG00000043313	POLR1A	100	65.023	ENSGAFG00000015266	polr1a	100	64.815	Gambusia_affinis
ENSMNEG00000043313	POLR1A	100	65.167	ENSGACG00000018791	polr1a	100	64.642	Gasterosteus_aculeatus
ENSMNEG00000043313	POLR1A	89	74.919	ENSGAGG00000004984	-	96	80.405	Gopherus_agassizii
ENSMNEG00000043313	POLR1A	100	97.791	ENSGGOG00000001788	POLR1A	100	97.791	Gorilla_gorilla
ENSMNEG00000043313	POLR1A	90	64.337	ENSHBUG00000020021	polr1a	99	64.537	Haplochromis_burtoni
ENSMNEG00000043313	POLR1A	100	89.373	ENSHGLG00000006334	POLR1A	100	89.199	Heterocephalus_glaber_female
ENSMNEG00000043313	POLR1A	100	89.114	ENSHGLG00100006614	POLR1A	100	88.940	Heterocephalus_glaber_male
ENSMNEG00000043313	POLR1A	100	62.061	ENSHCOG00000003345	polr1a	100	62.139	Hippocampus_comes
ENSMNEG00000043313	POLR1A	100	66.165	ENSIPUG00000013174	polr1a	100	65.378	Ictalurus_punctatus
ENSMNEG00000043313	POLR1A	99	87.551	ENSSTOG00000012580	POLR1A	99	87.260	Ictidomys_tridecemlineatus
ENSMNEG00000043313	POLR1A	100	87.594	ENSJJAG00000013113	Polr1a	100	87.420	Jaculus_jaculus
ENSMNEG00000043313	POLR1A	100	66.144	ENSKMAG00000007399	polr1a	100	65.563	Kryptolebias_marmoratus
ENSMNEG00000043313	POLR1A	95	68.347	ENSLBEG00000015401	polr1a	99	67.852	Labrus_bergylta
ENSMNEG00000043313	POLR1A	53	76.279	ENSLACG00000003218	polr1a	100	76.279	Latimeria_chalumnae
ENSMNEG00000043313	POLR1A	100	70.531	ENSLOCG00000010881	polr1a	100	70.242	Lepisosteus_oculatus
ENSMNEG00000043313	POLR1A	100	89.931	ENSLAFG00000014948	POLR1A	100	90.046	Loxodonta_africana
ENSMNEG00000043313	POLR1A	100	99.942	ENSMFAG00000046097	POLR1A	100	99.942	Macaca_fascicularis
ENSMNEG00000043313	POLR1A	100	99.826	ENSMMUG00000015815	POLR1A	100	99.826	Macaca_mulatta
ENSMNEG00000043313	POLR1A	100	99.012	ENSMLEG00000042428	POLR1A	100	99.012	Mandrillus_leucophaeus
ENSMNEG00000043313	POLR1A	100	65.879	ENSMAMG00000016565	polr1a	100	66.106	Mastacembelus_armatus
ENSMNEG00000043313	POLR1A	100	65.875	ENSMZEG00005004915	polr1a	100	65.394	Maylandia_zebra
ENSMNEG00000043313	POLR1A	99	69.217	ENSMGAG00000013111	POLR1A	99	69.333	Meleagris_gallopavo
ENSMNEG00000043313	POLR1A	92	87.272	ENSMAUG00000008497	Polr1a	100	87.618	Mesocricetus_auratus
ENSMNEG00000043313	POLR1A	100	92.795	ENSMICG00000000757	POLR1A	100	92.504	Microcebus_murinus
ENSMNEG00000043313	POLR1A	100	87.319	ENSMOCG00000000122	Polr1a	100	87.261	Microtus_ochrogaster
ENSMNEG00000043313	POLR1A	100	65.081	ENSMMOG00000010216	polr1a	100	64.655	Mola_mola
ENSMNEG00000043313	POLR1A	100	75.431	ENSMODG00000009335	POLR1A	100	75.029	Monodelphis_domestica
ENSMNEG00000043313	POLR1A	100	65.875	ENSMALG00000013363	polr1a	100	65.112	Monopterus_albus
ENSMNEG00000043313	POLR1A	100	85.450	MGP_CAROLIEiJ_G0028494	Polr1a	100	85.640	Mus_caroli
ENSMNEG00000043313	POLR1A	100	85.987	ENSMUSG00000049553	Polr1a	100	85.929	Mus_musculus
ENSMNEG00000043313	POLR1A	100	86.740	MGP_PahariEiJ_G0022230	Polr1a	100	86.393	Mus_pahari
ENSMNEG00000043313	POLR1A	100	84.966	MGP_SPRETEiJ_G0029499	Polr1a	100	84.760	Mus_spretus
ENSMNEG00000043313	POLR1A	100	91.221	ENSMPUG00000009135	POLR1A	100	91.105	Mustela_putorius_furo
ENSMNEG00000043313	POLR1A	100	89.994	ENSMLUG00000015723	POLR1A	100	89.647	Myotis_lucifugus
ENSMNEG00000043313	POLR1A	100	87.702	ENSNGAG00000017907	Polr1a	100	88.079	Nannospalax_galili
ENSMNEG00000043313	POLR1A	100	65.283	ENSNBRG00000000519	polr1a	100	65.587	Neolamprologus_brichardi
ENSMNEG00000043313	POLR1A	100	95.486	ENSNLEG00000002264	POLR1A	100	95.486	Nomascus_leucogenys
ENSMNEG00000043313	POLR1A	75	93.701	ENSMEUG00000011665	-	75	93.701	Notamacropus_eugenii
ENSMNEG00000043313	POLR1A	99	82.981	ENSOPRG00000008269	POLR1A	100	82.277	Ochotona_princeps
ENSMNEG00000043313	POLR1A	100	89.547	ENSODEG00000003542	POLR1A	100	89.082	Octodon_degus
ENSMNEG00000043313	POLR1A	100	66.184	ENSONIG00000015895	polr1a	100	65.953	Oreochromis_niloticus
ENSMNEG00000043313	POLR1A	100	91.110	ENSOCUG00000010138	POLR1A	100	91.110	Oryctolagus_cuniculus
ENSMNEG00000043313	POLR1A	100	65.298	ENSORLG00000008753	polr1a	99	65.046	Oryzias_latipes
ENSMNEG00000043313	POLR1A	100	64.062	ENSORLG00020020726	polr1a	99	63.463	Oryzias_latipes_hni
ENSMNEG00000043313	POLR1A	96	75.532	ENSORLG00015016071	polr1a	99	75.556	Oryzias_latipes_hsok
ENSMNEG00000043313	POLR1A	100	91.453	ENSOGAG00000004031	POLR1A	100	91.453	Otolemur_garnettii
ENSMNEG00000043313	POLR1A	100	89.785	ENSOARG00000020601	POLR1A	100	89.919	Ovis_aries
ENSMNEG00000043313	POLR1A	100	97.442	ENSPPAG00000042450	POLR1A	100	97.442	Pan_paniscus
ENSMNEG00000043313	POLR1A	100	92.151	ENSPPRG00000006702	POLR1A	100	91.802	Panthera_pardus
ENSMNEG00000043313	POLR1A	100	91.599	ENSPTIG00000018783	POLR1A	100	91.251	Panthera_tigris_altaica
ENSMNEG00000043313	POLR1A	100	97.267	ENSPTRG00000012147	POLR1A	100	97.267	Pan_troglodytes
ENSMNEG00000043313	POLR1A	100	99.593	ENSPANG00000025908	POLR1A	100	99.593	Papio_anubis
ENSMNEG00000043313	POLR1A	94	77.083	ENSPKIG00000005468	polr1a	99	77.083	Paramormyrops_kingsleyae
ENSMNEG00000043313	POLR1A	63	71.468	ENSPSIG00000009321	-	99	71.101	Pelodiscus_sinensis
ENSMNEG00000043313	POLR1A	54	68.449	ENSPMGG00000009718	polr1a	95	68.449	Periophthalmus_magnuspinnatus
ENSMNEG00000043313	POLR1A	100	87.970	ENSPEMG00000022224	Polr1a	100	88.130	Peromyscus_maniculatus_bairdii
ENSMNEG00000043313	POLR1A	95	79.526	ENSPCIG00000004222	POLR1A	99	78.784	Phascolarctos_cinereus
ENSMNEG00000043313	POLR1A	100	65.527	ENSPFOG00000005025	polr1a	100	65.064	Poecilia_formosa
ENSMNEG00000043313	POLR1A	100	65.701	ENSPLAG00000021389	polr1a	100	65.238	Poecilia_latipinna
ENSMNEG00000043313	POLR1A	100	63.789	ENSPMEG00000006463	polr1a	100	63.636	Poecilia_mexicana
ENSMNEG00000043313	POLR1A	100	65.469	ENSPREG00000002389	polr1a	100	65.026	Poecilia_reticulata
ENSMNEG00000043313	POLR1A	100	97.035	ENSPPYG00000012217	POLR1A	100	97.035	Pongo_abelii
ENSMNEG00000043313	POLR1A	88	96.000	ENSPCAG00000011582	POLR1A	88	96.000	Procavia_capensis
ENSMNEG00000043313	POLR1A	100	92.446	ENSPCOG00000026987	POLR1A	100	92.330	Propithecus_coquereli
ENSMNEG00000043313	POLR1A	95	91.912	ENSPVAG00000012674	POLR1A	95	91.166	Pteropus_vampyrus
ENSMNEG00000043313	POLR1A	100	65.875	ENSPNYG00000000026	polr1a	100	65.394	Pundamilia_nyererei
ENSMNEG00000043313	POLR1A	100	67.226	ENSPNAG00000019223	polr1a	99	67.962	Pygocentrus_nattereri
ENSMNEG00000043313	POLR1A	100	88.072	ENSRNOG00000009545	Polr1a	100	87.724	Rattus_norvegicus
ENSMNEG00000043313	POLR1A	100	98.605	ENSRBIG00000028335	POLR1A	100	98.605	Rhinopithecus_bieti
ENSMNEG00000043313	POLR1A	100	98.547	ENSRROG00000031473	POLR1A	100	98.547	Rhinopithecus_roxellana
ENSMNEG00000043313	POLR1A	99	37.045	YOR341W	RPA190	99	37.010	Saccharomyces_cerevisiae
ENSMNEG00000043313	POLR1A	100	94.593	ENSSBOG00000030262	POLR1A	100	94.593	Saimiri_boliviensis_boliviensis
ENSMNEG00000043313	POLR1A	100	74.006	ENSSHAG00000014739	POLR1A	100	72.842	Sarcophilus_harrisii
ENSMNEG00000043313	POLR1A	100	67.805	ENSSFOG00015019716	polr1a	100	67.478	Scleropages_formosus
ENSMNEG00000043313	POLR1A	100	66.377	ENSSMAG00000014342	polr1a	100	65.895	Scophthalmus_maximus
ENSMNEG00000043313	POLR1A	100	66.264	ENSSDUG00000014631	polr1a	100	66.358	Seriola_dumerili
ENSMNEG00000043313	POLR1A	100	64.269	ENSSLDG00000024095	polr1a	100	64.406	Seriola_lalandi_dorsalis
ENSMNEG00000043313	POLR1A	75	97.872	ENSSARG00000003136	-	76	97.872	Sorex_araneus
ENSMNEG00000043313	POLR1A	94	78.974	ENSSPUG00000004215	POLR1A	98	78.974	Sphenodon_punctatus
ENSMNEG00000043313	POLR1A	63	72.222	ENSSPAG00000016341	polr1a	94	72.222	Stegastes_partitus
ENSMNEG00000043313	POLR1A	83	91.661	ENSSSCG00000008226	POLR1A	99	91.637	Sus_scrofa
ENSMNEG00000043313	POLR1A	99	70.294	ENSTGUG00000010704	POLR1A	100	70.059	Taeniopygia_guttata
ENSMNEG00000043313	POLR1A	100	64.055	ENSTRUG00000002210	polr1a	99	63.736	Takifugu_rubripes
ENSMNEG00000043313	POLR1A	100	60.495	ENSTNIG00000010116	polr1a	100	60.472	Tetraodon_nigroviridis
ENSMNEG00000043313	POLR1A	74	97.345	ENSTBEG00000008646	POLR1A	70	100.000	Tupaia_belangeri
ENSMNEG00000043313	POLR1A	100	86.628	ENSTTRG00000008597	POLR1A	100	86.221	Tursiops_truncatus
ENSMNEG00000043313	POLR1A	69	91.716	ENSUAMG00000012158	-	94	91.124	Ursus_americanus
ENSMNEG00000043313	POLR1A	100	90.756	ENSUMAG00000006700	POLR1A	100	90.349	Ursus_maritimus
ENSMNEG00000043313	POLR1A	100	90.830	ENSVVUG00000001245	POLR1A	100	90.703	Vulpes_vulpes
ENSMNEG00000043313	POLR1A	100	67.919	ENSXETG00000001952	polr1a	100	69.328	Xenopus_tropicalis
ENSMNEG00000043313	POLR1A	100	65.451	ENSXMAG00000004032	polr1a	100	65.182	Xiphophorus_maculatus