EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMNEG00000043564 (Gene tree)
Gene ID: 105488502
Gene Symbol: CPSF1
Alias: CPSF160
Full Name: cleavage and polyadenylation specific factor 1
Gene Type: protein_coding
Species: Macaca_nemestrina
Status: putative
Strand: Minus strand
Length: 8378 bases
Position: chrKQ005094.1:5117929-5126306
Accession: 105488502
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMNEP00000041543	CPSF_A	PF03178.15	3e-91	1	1
ENSMNEP00000041550	CPSF_A	PF03178.15	2.4e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMNET00000066049	CPSF1-202	615	-	ENSMNEP00000041550	204 (aa)	-	A0A2K6E068
ENSMNET00000066042	CPSF1-201	4185	XM_011752665	ENSMNEP00000041543	1394 (aa)	XP_011750967	A0A2K6E049

Gene Model

Click here to download ENSMNEG00000043564's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMNEG00000043564's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMNEG00000043564	CPSF1	100	99.355	ENSG00000071894	CPSF1	100	98.529	Homo_sapiens
ENSMNEG00000043564	CPSF1	100	80.556	ENSAPOG00000019621	cpsf1	99	78.282	Acanthochromis_polyacanthus
ENSMNEG00000043564	CPSF1	100	94.989	ENSAMEG00000005557	CPSF1	99	94.989	Ailuropoda_melanoleuca
ENSMNEG00000043564	CPSF1	100	80.093	ENSACIG00000006112	cpsf1	97	78.351	Amphilophus_citrinellus
ENSMNEG00000043564	CPSF1	100	80.556	ENSAOCG00000007120	cpsf1	97	79.643	Amphiprion_ocellaris
ENSMNEG00000043564	CPSF1	100	80.556	ENSAPEG00000005755	cpsf1	97	79.943	Amphiprion_percula
ENSMNEG00000043564	CPSF1	100	80.093	ENSATEG00000011097	cpsf1	99	78.328	Anabas_testudineus
ENSMNEG00000043564	CPSF1	92	81.376	ENSACAG00000009655	CPSF1	96	81.250	Anolis_carolinensis
ENSMNEG00000043564	CPSF1	100	99.067	ENSANAG00000036514	CPSF1	97	99.067	Aotus_nancymaae
ENSMNEG00000043564	CPSF1	100	79.167	ENSACLG00000012231	cpsf1	99	78.536	Astatotilapia_calliptera
ENSMNEG00000043564	CPSF1	100	79.630	ENSAMXG00000008485	cpsf1	96	74.319	Astyanax_mexicanus
ENSMNEG00000043564	CPSF1	100	94.444	ENSBTAG00000008355	CPSF1	100	94.744	Bos_taurus
ENSMNEG00000043564	CPSF1	99	33.333	WBGene00022301	cpsf-1	100	40.282	Caenorhabditis_elegans
ENSMNEG00000043564	CPSF1	100	98.780	ENSCJAG00000021421	CPSF1	97	98.780	Callithrix_jacchus
ENSMNEG00000043564	CPSF1	100	96.421	ENSCAFG00000001600	CPSF1	100	96.570	Canis_familiaris
ENSMNEG00000043564	CPSF1	100	96.421	ENSCAFG00020020821	CPSF1	97	96.421	Canis_lupus_dingo
ENSMNEG00000043564	CPSF1	100	90.663	ENSCHIG00000015833	CPSF1	97	90.663	Capra_hircus
ENSMNEG00000043564	CPSF1	100	97.848	ENSTSYG00000028560	CPSF1	100	96.078	Carlito_syrichta
ENSMNEG00000043564	CPSF1	100	95.265	ENSCAPG00000014921	CPSF1	99	95.265	Cavia_aperea
ENSMNEG00000043564	CPSF1	100	94.767	ENSCPOG00000011448	CPSF1	97	94.767	Cavia_porcellus
ENSMNEG00000043564	CPSF1	100	99.067	ENSCCAG00000037658	CPSF1	97	99.067	Cebus_capucinus
ENSMNEG00000043564	CPSF1	100	100.000	ENSCATG00000037234	CPSF1	100	100.000	Cercocebus_atys
ENSMNEG00000043564	CPSF1	100	96.557	ENSCLAG00000012166	CPSF1	97	96.557	Chinchilla_lanigera
ENSMNEG00000043564	CPSF1	100	99.641	ENSCSAG00000008502	CPSF1	97	99.641	Chlorocebus_sabaeus
ENSMNEG00000043564	CPSF1	99	87.600	ENSCPBG00000018910	CPSF1	93	87.600	Chrysemys_picta_bellii
ENSMNEG00000043564	CPSF1	95	48.289	ENSCING00000000514	-	96	48.214	Ciona_intestinalis
ENSMNEG00000043564	CPSF1	99	47.656	ENSCSAVG00000002293	-	98	49.765	Ciona_savignyi
ENSMNEG00000043564	CPSF1	100	99.020	ENSCANG00000032760	CPSF1	100	99.020	Colobus_angolensis_palliatus
ENSMNEG00000043564	CPSF1	100	96.485	ENSCGRG00001016344	Cpsf1	97	96.485	Cricetulus_griseus_chok1gshd
ENSMNEG00000043564	CPSF1	100	94.333	ENSCGRG00000003118	Cpsf1	97	94.333	Cricetulus_griseus_crigri
ENSMNEG00000043564	CPSF1	99	78.009	ENSCSEG00000013464	cpsf1	99	77.794	Cynoglossus_semilaevis
ENSMNEG00000043564	CPSF1	100	81.463	ENSCVAG00000014059	cpsf1	100	81.463	Cyprinodon_variegatus
ENSMNEG00000043564	CPSF1	99	80.430	ENSDARG00000034178	cpsf1	97	80.128	Danio_rerio
ENSMNEG00000043564	CPSF1	54	95.652	ENSDNOG00000043654	CPSF1	87	95.652	Dasypus_novemcinctus
ENSMNEG00000043564	CPSF1	99	96.123	ENSDORG00000006278	Cpsf1	99	96.123	Dipodomys_ordii
ENSMNEG00000043564	CPSF1	99	45.652	FBgn0024698	Cpsf160	96	45.544	Drosophila_melanogaster
ENSMNEG00000043564	CPSF1	80	97.315	ENSETEG00000006022	CPSF1	79	97.315	Echinops_telfairi
ENSMNEG00000043564	CPSF1	90	62.245	ENSEBUG00000006844	-	97	74.541	Eptatretus_burgeri
ENSMNEG00000043564	CPSF1	100	96.994	ENSEASG00005010774	CPSF1	97	96.994	Equus_asinus_asinus
ENSMNEG00000043564	CPSF1	100	96.994	ENSECAG00000022209	CPSF1	97	96.994	Equus_caballus
ENSMNEG00000043564	CPSF1	99	95.300	ENSEEUG00000000471	CPSF1	96	95.300	Erinaceus_europaeus
ENSMNEG00000043564	CPSF1	100	79.630	ENSELUG00000012271	cpsf1	100	78.459	Esox_lucius
ENSMNEG00000043564	CPSF1	100	96.557	ENSFDAG00000016060	CPSF1	97	96.557	Fukomys_damarensis
ENSMNEG00000043564	CPSF1	99	77.247	ENSFHEG00000016801	cpsf1	97	77.104	Fundulus_heteroclitus
ENSMNEG00000043564	CPSF1	100	78.704	ENSGMOG00000000796	cpsf1	97	78.429	Gadus_morhua
ENSMNEG00000043564	CPSF1	95	85.714	ENSGAFG00000018890	cpsf1	96	85.714	Gambusia_affinis
ENSMNEG00000043564	CPSF1	100	78.704	ENSGACG00000008703	cpsf1	97	78.846	Gasterosteus_aculeatus
ENSMNEG00000043564	CPSF1	99	83.859	ENSGAGG00000004276	CPSF1	98	87.416	Gopherus_agassizii
ENSMNEG00000043564	CPSF1	100	62.745	ENSGGOG00000040487	-	100	70.833	Gorilla_gorilla
ENSMNEG00000043564	CPSF1	100	99.498	ENSGGOG00000016185	CPSF1	100	99.020	Gorilla_gorilla
ENSMNEG00000043564	CPSF1	100	79.167	ENSHBUG00000018900	cpsf1	96	79.785	Haplochromis_burtoni
ENSMNEG00000043564	CPSF1	100	96.413	ENSHGLG00000016139	CPSF1	97	96.413	Heterocephalus_glaber_female
ENSMNEG00000043564	CPSF1	100	96.341	ENSHGLG00100009750	CPSF1	97	96.341	Heterocephalus_glaber_male
ENSMNEG00000043564	CPSF1	100	77.778	ENSHCOG00000018509	cpsf1	97	77.426	Hippocampus_comes
ENSMNEG00000043564	CPSF1	100	80.093	ENSIPUG00000011259	cpsf1	97	77.082	Ictalurus_punctatus
ENSMNEG00000043564	CPSF1	100	96.640	ENSSTOG00000009957	CPSF1	99	96.640	Ictidomys_tridecemlineatus
ENSMNEG00000043564	CPSF1	100	96.270	ENSJJAG00000023002	Cpsf1	97	96.270	Jaculus_jaculus
ENSMNEG00000043564	CPSF1	100	75.926	ENSKMAG00000001940	cpsf1	96	85.893	Kryptolebias_marmoratus
ENSMNEG00000043564	CPSF1	100	79.167	ENSLBEG00000003601	cpsf1	97	77.920	Labrus_bergylta
ENSMNEG00000043564	CPSF1	100	82.407	ENSLACG00000000233	CPSF1	87	81.370	Latimeria_chalumnae
ENSMNEG00000043564	CPSF1	100	81.651	ENSLOCG00000008484	cpsf1	97	78.413	Lepisosteus_oculatus
ENSMNEG00000043564	CPSF1	100	95.490	ENSLAFG00000022601	CPSF1	99	95.490	Loxodonta_africana
ENSMNEG00000043564	CPSF1	100	100.000	ENSMFAG00000037013	CPSF1	100	100.000	Macaca_fascicularis
ENSMNEG00000043564	CPSF1	100	100.000	ENSMMUG00000007380	CPSF1	100	100.000	Macaca_mulatta
ENSMNEG00000043564	CPSF1	100	100.000	ENSMLEG00000043010	CPSF1	100	100.000	Mandrillus_leucophaeus
ENSMNEG00000043564	CPSF1	100	80.093	ENSMAMG00000003803	cpsf1	99	78.811	Mastacembelus_armatus
ENSMNEG00000043564	CPSF1	100	79.167	ENSMZEG00005001168	cpsf1	97	78.314	Maylandia_zebra
ENSMNEG00000043564	CPSF1	100	96.270	ENSMAUG00000003601	Cpsf1	97	96.270	Mesocricetus_auratus
ENSMNEG00000043564	CPSF1	100	97.489	ENSMICG00000015767	CPSF1	97	97.489	Microcebus_murinus
ENSMNEG00000043564	CPSF1	100	96.413	ENSMOCG00000022758	Cpsf1	97	96.413	Microtus_ochrogaster
ENSMNEG00000043564	CPSF1	99	79.541	ENSMMOG00000021245	cpsf1	96	79.541	Mola_mola
ENSMNEG00000043564	CPSF1	99	93.214	ENSMODG00000010755	CPSF1	97	93.214	Monodelphis_domestica
ENSMNEG00000043564	CPSF1	100	79.167	ENSMALG00000020545	cpsf1	97	77.972	Monopterus_albus
ENSMNEG00000043564	CPSF1	100	96.557	MGP_CAROLIEiJ_G0019936	Cpsf1	97	96.557	Mus_caroli
ENSMNEG00000043564	CPSF1	100	96.485	ENSMUSG00000034022	Cpsf1	97	96.485	Mus_musculus
ENSMNEG00000043564	CPSF1	100	96.413	MGP_PahariEiJ_G0019946	Cpsf1	97	96.413	Mus_pahari
ENSMNEG00000043564	CPSF1	100	96.485	MGP_SPRETEiJ_G0020839	Cpsf1	97	96.485	Mus_spretus
ENSMNEG00000043564	CPSF1	97	95.704	ENSMPUG00000006419	CPSF1	93	95.704	Mustela_putorius_furo
ENSMNEG00000043564	CPSF1	78	97.484	ENSMLUG00000000667	-	100	96.667	Myotis_lucifugus
ENSMNEG00000043564	CPSF1	100	96.270	ENSNGAG00000022460	Cpsf1	97	96.270	Nannospalax_galili
ENSMNEG00000043564	CPSF1	100	79.167	ENSNBRG00000000813	cpsf1	96	76.049	Neolamprologus_brichardi
ENSMNEG00000043564	CPSF1	100	99.020	ENSNLEG00000010633	-	100	99.020	Nomascus_leucogenys
ENSMNEG00000043564	CPSF1	85	96.512	ENSMEUG00000014922	CPSF1	85	96.512	Notamacropus_eugenii
ENSMNEG00000043564	CPSF1	63	96.939	ENSOPRG00000004693	-	71	96.939	Ochotona_princeps
ENSMNEG00000043564	CPSF1	100	96.700	ENSODEG00000013995	CPSF1	97	96.700	Octodon_degus
ENSMNEG00000043564	CPSF1	99	80.287	ENSONIG00000007676	cpsf1	97	79.957	Oreochromis_niloticus
ENSMNEG00000043564	CPSF1	60	91.429	ENSOANG00000010716	CPSF1	88	91.429	Ornithorhynchus_anatinus
ENSMNEG00000043564	CPSF1	100	77.778	ENSORLG00000013544	cpsf1	92	87.243	Oryzias_latipes
ENSMNEG00000043564	CPSF1	100	77.778	ENSORLG00020021693	cpsf1	92	87.243	Oryzias_latipes_hni
ENSMNEG00000043564	CPSF1	100	77.778	ENSORLG00015009979	cpsf1	97	77.864	Oryzias_latipes_hsok
ENSMNEG00000043564	CPSF1	100	77.778	ENSOMEG00000011849	cpsf1	97	77.762	Oryzias_melastigma
ENSMNEG00000043564	CPSF1	99	97.703	ENSOGAG00000000315	CPSF1	97	97.703	Otolemur_garnettii
ENSMNEG00000043564	CPSF1	100	99.570	ENSPPAG00000019280	CPSF1	100	99.020	Pan_paniscus
ENSMNEG00000043564	CPSF1	100	61.765	ENSPTRG00000052516	-	100	69.444	Pan_troglodytes
ENSMNEG00000043564	CPSF1	100	99.020	ENSPTRG00000051253	-	100	99.020	Pan_troglodytes
ENSMNEG00000043564	CPSF1	100	99.570	ENSPTRG00000049288	-	100	99.020	Pan_troglodytes
ENSMNEG00000043564	CPSF1	100	99.857	ENSPANG00000015005	CPSF1	100	99.857	Papio_anubis
ENSMNEG00000043564	CPSF1	100	81.481	ENSPKIG00000002582	cpsf1	100	80.895	Paramormyrops_kingsleyae
ENSMNEG00000043564	CPSF1	100	75.926	ENSPMGG00000022177	-	100	84.259	Periophthalmus_magnuspinnatus
ENSMNEG00000043564	CPSF1	99	93.143	ENSPCIG00000009035	CPSF1	97	93.143	Phascolarctos_cinereus
ENSMNEG00000043564	CPSF1	100	76.389	ENSPFOG00000012870	cpsf1	97	76.643	Poecilia_formosa
ENSMNEG00000043564	CPSF1	100	75.926	ENSPREG00000016307	cpsf1	97	76.380	Poecilia_reticulata
ENSMNEG00000043564	CPSF1	100	90.818	ENSPPYG00000018973	CPSF1	96	90.818	Pongo_abelii
ENSMNEG00000043564	CPSF1	94	94.886	ENSPCAG00000011541	CPSF1	94	94.886	Procavia_capensis
ENSMNEG00000043564	CPSF1	100	95.098	ENSPCOG00000020001	CPSF1	100	95.098	Propithecus_coquereli
ENSMNEG00000043564	CPSF1	90	98.571	ENSPVAG00000006761	CPSF1	88	98.571	Pteropus_vampyrus
ENSMNEG00000043564	CPSF1	100	79.167	ENSPNYG00000004906	cpsf1	99	78.677	Pundamilia_nyererei
ENSMNEG00000043564	CPSF1	99	75.573	ENSPNAG00000024395	cpsf1	97	75.573	Pygocentrus_nattereri
ENSMNEG00000043564	CPSF1	100	96.485	ENSRNOG00000030705	Cpsf1	97	96.485	Rattus_norvegicus
ENSMNEG00000043564	CPSF1	100	99.713	ENSRBIG00000044907	CPSF1	100	99.510	Rhinopithecus_bieti
ENSMNEG00000043564	CPSF1	100	99.641	ENSRROG00000044861	CPSF1	100	99.510	Rhinopithecus_roxellana
ENSMNEG00000043564	CPSF1	100	98.780	ENSSBOG00000027177	CPSF1	100	98.780	Saimiri_boliviensis_boliviensis
ENSMNEG00000043564	CPSF1	99	92.857	ENSSHAG00000006500	CPSF1	97	92.857	Sarcophilus_harrisii
ENSMNEG00000043564	CPSF1	100	81.944	ENSSFOG00015004606	cpsf1	100	81.164	Scleropages_formosus
ENSMNEG00000043564	CPSF1	100	80.556	ENSSMAG00000020547	cpsf1	97	78.182	Scophthalmus_maximus
ENSMNEG00000043564	CPSF1	100	80.093	ENSSDUG00000001100	cpsf1	96	80.187	Seriola_dumerili
ENSMNEG00000043564	CPSF1	100	80.093	ENSSLDG00000003619	cpsf1	96	80.245	Seriola_lalandi_dorsalis
ENSMNEG00000043564	CPSF1	89	92.805	ENSSARG00000003643	CPSF1	88	92.805	Sorex_araneus
ENSMNEG00000043564	CPSF1	100	88.725	ENSSPUG00000014396	CPSF1	100	88.725	Sphenodon_punctatus
ENSMNEG00000043564	CPSF1	100	80.093	ENSSPAG00000005349	cpsf1	97	78.407	Stegastes_partitus
ENSMNEG00000043564	CPSF1	100	95.848	ENSSSCG00000005906	CPSF1	97	95.848	Sus_scrofa
ENSMNEG00000043564	CPSF1	99	77.902	ENSTRUG00000013134	cpsf1	99	77.692	Takifugu_rubripes
ENSMNEG00000043564	CPSF1	99	79.146	ENSTNIG00000014027	cpsf1	97	78.932	Tetraodon_nigroviridis
ENSMNEG00000043564	CPSF1	77	94.206	ENSTBEG00000001756	CPSF1	90	94.206	Tupaia_belangeri
ENSMNEG00000043564	CPSF1	100	88.426	ENSTTRG00000001937	CPSF1	86	96.546	Tursiops_truncatus
ENSMNEG00000043564	CPSF1	100	96.779	ENSUAMG00000006476	CPSF1	98	96.779	Ursus_americanus
ENSMNEG00000043564	CPSF1	67	54.967	ENSVPAG00000000157	-	50	94.421	Vicugna_pacos
ENSMNEG00000043564	CPSF1	100	93.627	ENSVVUG00000005940	-	100	93.627	Vulpes_vulpes
ENSMNEG00000043564	CPSF1	99	78.433	ENSXCOG00000003608	cpsf1	96	78.217	Xiphophorus_couchianus
ENSMNEG00000043564	CPSF1	99	77.889	ENSXMAG00000005798	cpsf1	96	77.818	Xiphophorus_maculatus