EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMNEG00000043786 (Gene tree)
Gene ID: 105497660
Gene Symbol: -
Alias: -
Full Name: pentatricopeptide repeat domain 1
Gene Type: protein_coding
Species: Macaca_nemestrina
Status: putative
Strand: Plus strand
Length: 17296 bases
Position: chrKQ004620.1:1643572-1660867
Accession: 105497660
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMNEP00000041982	PPR	PF01535.20	6.1e-16	1	2
ENSMNEP00000041982	PPR	PF01535.20	6.1e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMNET00000066484	-	3208	XM_011768933	ENSMNEP00000041982	701 (aa)	XP_011767235	A0A2K6E1F6

Gene Model

Click here to download ENSMNEG00000043786's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMNEG00000043786's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMNEG00000043786	-	100	93.438	ENSG00000248919	ATP5MF-PTCD1	93	93.438	Homo_sapiens
ENSMNEG00000043786	-	100	93.438	ENSG00000106246	PTCD1	100	93.438	Homo_sapiens
ENSMNEG00000043786	-	80	46.914	ENSAPOG00000010679	ptcd1	85	47.048	Acanthochromis_polyacanthus
ENSMNEG00000043786	-	99	77.010	ENSAMEG00000006224	-	93	76.728	Ailuropoda_melanoleuca
ENSMNEG00000043786	-	83	49.916	ENSACIG00000017861	ptcd1	83	49.831	Amphilophus_citrinellus
ENSMNEG00000043786	-	88	45.440	ENSAOCG00000022617	ptcd1	81	48.301	Amphiprion_ocellaris
ENSMNEG00000043786	-	92	46.319	ENSAOCG00000020741	-	84	47.883	Amphiprion_ocellaris
ENSMNEG00000043786	-	96	45.374	ENSAPEG00000022632	ptcd1	93	45.374	Amphiprion_percula
ENSMNEG00000043786	-	85	50.083	ENSATEG00000007016	ptcd1	80	50.424	Anabas_testudineus
ENSMNEG00000043786	-	87	58.481	ENSAPLG00000006862	-	95	58.320	Anas_platyrhynchos
ENSMNEG00000043786	-	99	55.064	ENSACAG00000012871	-	92	55.064	Anolis_carolinensis
ENSMNEG00000043786	-	98	88.937	ENSANAG00000035790	-	100	88.646	Aotus_nancymaae
ENSMNEG00000043786	-	83	48.567	ENSACLG00000002824	ptcd1	80	48.480	Astatotilapia_calliptera
ENSMNEG00000043786	-	89	46.308	ENSAMXG00000037292	ptcd1	91	46.308	Astyanax_mexicanus
ENSMNEG00000043786	-	100	76.771	ENSBTAG00000020440	-	87	76.487	Bos_taurus
ENSMNEG00000043786	-	100	89.347	ENSCJAG00000015815	-	100	88.920	Callithrix_jacchus
ENSMNEG00000043786	-	100	75.282	ENSCAFG00000015055	-	93	75.000	Canis_familiaris
ENSMNEG00000043786	-	100	75.282	ENSCAFG00020014480	-	93	75.000	Canis_lupus_dingo
ENSMNEG00000043786	-	100	76.170	ENSCHIG00000027000	-	99	75.887	Capra_hircus
ENSMNEG00000043786	-	100	79.944	ENSTSYG00000029495	-	100	79.520	Carlito_syrichta
ENSMNEG00000043786	-	93	74.465	ENSCAPG00000014660	-	99	74.159	Cavia_aperea
ENSMNEG00000043786	-	99	73.752	ENSCPOG00000001780	-	99	73.466	Cavia_porcellus
ENSMNEG00000043786	-	100	87.376	ENSCCAG00000034025	-	100	87.376	Cebus_capucinus
ENSMNEG00000043786	-	100	99.572	ENSCATG00000040859	-	100	99.572	Cercocebus_atys
ENSMNEG00000043786	-	98	76.361	ENSCLAG00000006354	-	100	75.493	Chinchilla_lanigera
ENSMNEG00000043786	-	91	97.660	ENSCSAG00000017794	-	95	97.660	Chlorocebus_sabaeus
ENSMNEG00000043786	-	97	54.707	ENSCPBG00000020866	-	97	54.570	Chrysemys_picta_bellii
ENSMNEG00000043786	-	82	31.409	ENSCING00000007717	-	90	32.288	Ciona_intestinalis
ENSMNEG00000043786	-	100	94.864	ENSCANG00000023441	-	100	94.864	Colobus_angolensis_palliatus
ENSMNEG00000043786	-	99	74.212	ENSCGRG00001023686	Ptcd1	99	74.212	Cricetulus_griseus_chok1gshd
ENSMNEG00000043786	-	99	73.789	ENSCGRG00000015031	Ptcd1	99	73.789	Cricetulus_griseus_crigri
ENSMNEG00000043786	-	84	48.067	ENSCSEG00000002378	ptcd1	80	48.469	Cynoglossus_semilaevis
ENSMNEG00000043786	-	83	49.408	ENSCVAG00000015826	ptcd1	81	48.810	Cyprinodon_variegatus
ENSMNEG00000043786	-	85	48.675	ENSCVAG00000003621	ptcd1	88	48.087	Cyprinodon_variegatus
ENSMNEG00000043786	-	89	49.307	ENSDARG00000076176	ptcd1	88	49.522	Danio_rerio
ENSMNEG00000043786	-	99	73.229	ENSDNOG00000009957	-	99	73.229	Dasypus_novemcinctus
ENSMNEG00000043786	-	98	73.813	ENSDORG00000000740	Ptcd1	99	73.669	Dipodomys_ordii
ENSMNEG00000043786	-	90	40.456	ENSEBUG00000014515	ptcd1	99	40.992	Eptatretus_burgeri
ENSMNEG00000043786	-	100	78.541	ENSEASG00005002480	-	100	77.980	Equus_asinus_asinus
ENSMNEG00000043786	-	100	78.962	ENSECAG00000016617	-	100	78.401	Equus_caballus
ENSMNEG00000043786	-	84	48.154	ENSELUG00000016517	ptcd1	82	48.148	Esox_lucius
ENSMNEG00000043786	-	100	75.882	ENSFCAG00000015069	-	100	75.458	Felis_catus
ENSMNEG00000043786	-	93	57.375	ENSFALG00000013803	-	92	58.657	Ficedula_albicollis
ENSMNEG00000043786	-	100	75.603	ENSFDAG00000006393	-	100	75.461	Fukomys_damarensis
ENSMNEG00000043786	-	74	47.566	ENSFHEG00000012491	ptcd1	87	47.566	Fundulus_heteroclitus
ENSMNEG00000043786	-	86	47.611	ENSGMOG00000007639	ptcd1	96	47.611	Gadus_morhua
ENSMNEG00000043786	-	92	56.889	ENSGALG00000004711	-	92	56.889	Gallus_gallus
ENSMNEG00000043786	-	84	47.987	ENSGAFG00000013175	ptcd1	82	48.061	Gambusia_affinis
ENSMNEG00000043786	-	87	48.697	ENSGACG00000016607	ptcd1	91	48.534	Gasterosteus_aculeatus
ENSMNEG00000043786	-	92	54.829	ENSGAGG00000021832	-	100	54.586	Gopherus_agassizii
ENSMNEG00000043786	-	99	93.429	ENSGGOG00000015123	-	99	93.429	Gorilla_gorilla
ENSMNEG00000043786	-	83	48.398	ENSHBUG00000018275	ptcd1	80	48.311	Haplochromis_burtoni
ENSMNEG00000043786	-	100	76.062	ENSHGLG00000017621	-	100	75.921	Heterocephalus_glaber_female
ENSMNEG00000043786	-	100	76.062	ENSHGLG00100007218	-	100	75.921	Heterocephalus_glaber_male
ENSMNEG00000043786	-	85	47.833	ENSHCOG00000010784	ptcd1	82	48.448	Hippocampus_comes
ENSMNEG00000043786	-	100	74.053	ENSSTOG00000001682	-	100	73.633	Ictidomys_tridecemlineatus
ENSMNEG00000043786	-	100	73.475	ENSJJAG00000000319	Ptcd1	100	73.191	Jaculus_jaculus
ENSMNEG00000043786	-	83	49.320	ENSKMAG00000008708	ptcd1	80	49.233	Kryptolebias_marmoratus
ENSMNEG00000043786	-	87	47.735	ENSLBEG00000008061	ptcd1	83	48.455	Labrus_bergylta
ENSMNEG00000043786	-	87	58.587	ENSLACG00000011172	ptcd1	86	58.587	Latimeria_chalumnae
ENSMNEG00000043786	-	86	54.705	ENSLOCG00000004833	ptcd1	93	55.017	Lepisosteus_oculatus
ENSMNEG00000043786	-	99	69.873	ENSLAFG00000002588	-	99	70.438	Loxodonta_africana
ENSMNEG00000043786	-	100	99.715	ENSMFAG00000041324	-	100	99.715	Macaca_fascicularis
ENSMNEG00000043786	-	100	99.429	ENSMMUG00000030408	-	100	99.429	Macaca_mulatta
ENSMNEG00000043786	-	100	76.605	ENSMLEG00000031179	-	100	78.745	Mandrillus_leucophaeus
ENSMNEG00000043786	-	88	48.875	ENSMAMG00000007623	ptcd1	80	50.000	Mastacembelus_armatus
ENSMNEG00000043786	-	83	48.567	ENSMZEG00005012722	ptcd1	80	48.480	Maylandia_zebra
ENSMNEG00000043786	-	98	56.304	ENSMGAG00000004211	-	92	56.590	Meleagris_gallopavo
ENSMNEG00000043786	-	99	77.715	ENSMICG00000017428	-	99	77.292	Microcebus_murinus
ENSMNEG00000043786	-	87	47.635	ENSMMOG00000020243	ptcd1	88	48.976	Mola_mola
ENSMNEG00000043786	-	98	58.299	ENSMODG00000001350	-	99	58.299	Monodelphis_domestica
ENSMNEG00000043786	-	83	50.084	ENSMALG00000018442	ptcd1	80	49.915	Monopterus_albus
ENSMNEG00000043786	-	99	74.603	MGP_CAROLIEiJ_G0028011	Ptcd1	99	74.603	Mus_caroli
ENSMNEG00000043786	-	99	74.315	ENSMUSG00000029624	Ptcd1	99	74.315	Mus_musculus
ENSMNEG00000043786	-	99	74.747	MGP_PahariEiJ_G0024580	Ptcd1	99	74.747	Mus_pahari
ENSMNEG00000043786	-	99	74.459	MGP_SPRETEiJ_G0029012	Ptcd1	99	74.459	Mus_spretus
ENSMNEG00000043786	-	100	75.000	ENSMPUG00000016518	-	100	74.860	Mustela_putorius_furo
ENSMNEG00000043786	-	100	78.652	ENSMLUG00000010994	-	94	78.230	Myotis_lucifugus
ENSMNEG00000043786	-	88	47.235	ENSNBRG00000010079	ptcd1	85	47.876	Neolamprologus_brichardi
ENSMNEG00000043786	-	100	92.147	ENSNLEG00000011060	-	100	92.147	Nomascus_leucogenys
ENSMNEG00000043786	-	97	61.803	ENSMEUG00000006930	-	99	61.803	Notamacropus_eugenii
ENSMNEG00000043786	-	89	76.581	ENSOPRG00000013647	-	89	76.581	Ochotona_princeps
ENSMNEG00000043786	-	83	47.555	ENSONIG00000003168	ptcd1	95	47.466	Oreochromis_niloticus
ENSMNEG00000043786	-	80	57.979	ENSOANG00000007728	-	73	57.658	Ornithorhynchus_anatinus
ENSMNEG00000043786	-	99	72.624	ENSOCUG00000010584	-	98	72.057	Oryctolagus_cuniculus
ENSMNEG00000043786	-	85	49.085	ENSORLG00000009275	ptcd1	85	49.164	Oryzias_latipes
ENSMNEG00000043786	-	85	47.619	ENSORLG00020000988	ptcd1	85	47.690	Oryzias_latipes_hni
ENSMNEG00000043786	-	85	48.419	ENSORLG00015010557	ptcd1	85	48.495	Oryzias_latipes_hsok
ENSMNEG00000043786	-	85	48.586	ENSOMEG00000020627	ptcd1	87	48.744	Oryzias_melastigma
ENSMNEG00000043786	-	99	74.857	ENSOGAG00000010877	-	100	74.429	Otolemur_garnettii
ENSMNEG00000043786	-	100	72.096	ENSOARG00000018676	-	100	71.813	Ovis_aries
ENSMNEG00000043786	-	100	93.010	ENSPPAG00000036024	-	100	93.010	Pan_paniscus
ENSMNEG00000043786	-	100	76.487	ENSPPRG00000003478	-	100	76.204	Panthera_pardus
ENSMNEG00000043786	-	100	93.010	ENSPTRG00000019452	-	100	93.010	Pan_troglodytes
ENSMNEG00000043786	-	100	99.429	ENSPANG00000016730	-	100	99.429	Papio_anubis
ENSMNEG00000043786	-	96	48.915	ENSPKIG00000014215	ptcd1	97	48.621	Paramormyrops_kingsleyae
ENSMNEG00000043786	-	84	57.930	ENSPSIG00000011184	-	100	58.306	Pelodiscus_sinensis
ENSMNEG00000043786	-	73	41.524	ENSPMAG00000009667	ptcd1	99	41.524	Petromyzon_marinus
ENSMNEG00000043786	-	98	59.452	ENSPCIG00000024778	-	98	59.452	Phascolarctos_cinereus
ENSMNEG00000043786	-	90	46.395	ENSPFOG00000004458	ptcd1	82	48.398	Poecilia_formosa
ENSMNEG00000043786	-	84	48.490	ENSPLAG00000011051	ptcd1	82	48.567	Poecilia_latipinna
ENSMNEG00000043786	-	90	46.865	ENSPMEG00000020547	ptcd1	82	48.567	Poecilia_mexicana
ENSMNEG00000043786	-	82	47.386	ENSPREG00000000059	ptcd1	81	47.458	Poecilia_reticulata
ENSMNEG00000043786	-	95	93.514	ENSPPYG00000017377	-	100	93.514	Pongo_abelii
ENSMNEG00000043786	-	81	74.286	ENSPCAG00000001852	-	88	72.936	Procavia_capensis
ENSMNEG00000043786	-	99	79.345	ENSPCOG00000018596	-	99	78.470	Propithecus_coquereli
ENSMNEG00000043786	-	67	89.000	ENSPVAG00000007529	-	72	89.000	Pteropus_vampyrus
ENSMNEG00000043786	-	83	48.229	ENSPNYG00000019993	ptcd1	80	48.142	Pundamilia_nyererei
ENSMNEG00000043786	-	86	50.000	ENSPNAG00000014931	ptcd1	90	49.131	Pygocentrus_nattereri
ENSMNEG00000043786	-	98	74.527	ENSRNOG00000000987	Ptcd1	98	74.746	Rattus_norvegicus
ENSMNEG00000043786	-	100	95.435	ENSRBIG00000043393	-	100	95.435	Rhinopithecus_bieti
ENSMNEG00000043786	-	100	95.292	ENSRROG00000036420	-	100	95.292	Rhinopithecus_roxellana
ENSMNEG00000043786	-	100	88.762	ENSSBOG00000024114	-	100	88.478	Saimiri_boliviensis_boliviensis
ENSMNEG00000043786	-	98	56.985	ENSSHAG00000011376	-	98	61.574	Sarcophilus_harrisii
ENSMNEG00000043786	-	85	53.571	ENSSFOG00015007909	ptcd1	82	54.160	Scleropages_formosus
ENSMNEG00000043786	-	83	48.485	ENSSMAG00000000218	ptcd1	91	47.811	Scophthalmus_maximus
ENSMNEG00000043786	-	88	46.984	ENSSDUG00000015671	ptcd1	86	47.326	Seriola_dumerili
ENSMNEG00000043786	-	84	48.662	ENSSLDG00000014261	ptcd1	83	48.485	Seriola_lalandi_dorsalis
ENSMNEG00000043786	-	96	53.547	ENSSPUG00000003540	-	97	53.964	Sphenodon_punctatus
ENSMNEG00000043786	-	84	48.997	ENSSPAG00000011049	ptcd1	80	49.073	Stegastes_partitus
ENSMNEG00000043786	-	92	78.793	ENSSSCG00000007622	-	98	78.387	Sus_scrofa
ENSMNEG00000043786	-	87	60.848	ENSTGUG00000007563	-	99	61.424	Taeniopygia_guttata
ENSMNEG00000043786	-	86	48.214	ENSTRUG00000013471	ptcd1	79	48.893	Takifugu_rubripes
ENSMNEG00000043786	-	85	48.253	ENSTNIG00000008271	ptcd1	83	49.060	Tetraodon_nigroviridis
ENSMNEG00000043786	-	100	74.510	ENSTBEG00000011021	-	100	74.090	Tupaia_belangeri
ENSMNEG00000043786	-	99	75.645	ENSTTRG00000003006	-	99	75.501	Tursiops_truncatus
ENSMNEG00000043786	-	99	76.869	ENSUAMG00000008049	-	99	76.587	Ursus_americanus
ENSMNEG00000043786	-	99	75.177	ENSVVUG00000008836	-	100	74.894	Vulpes_vulpes
ENSMNEG00000043786	-	93	50.299	ENSXETG00000009891	ptcd1	87	52.815	Xenopus_tropicalis
ENSMNEG00000043786	-	90	47.152	ENSXMAG00000015540	ptcd1	85	47.974	Xiphophorus_maculatus