EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMNEG00000044425 (Gene tree)
Gene ID: 105498044
Gene Symbol: SMG5
Alias: EST1B|KIAA1089|LPTS-RP1|LPTSRP1|RP11-54H19.7|SMG-5
Full Name: SMG5%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Macaca_nemestrina
Status: putative
Strand: Minus strand
Length: 37108 bases
Position: chrKQ006030.1:7101218-7138325
Accession: 105498044
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMNEP00000043500	EST1	PF10374.9	1.3e-23	1	1
ENSMNEP00000043500	EST1_DNA_bind	PF10373.9	5.3e-40	1	2
ENSMNEP00000043500	EST1_DNA_bind	PF10373.9	5.3e-40	2	2
ENSMNEP00000043500	PIN_4	PF13638.6	3.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMNET00000068008	SMG5-201	4630	XM_011769801	ENSMNEP00000043500	1016 (aa)	XP_011768103	A0A2K6E5Q7

Gene Model

Click here to download ENSMNEG00000044425's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMNEG00000044425's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMNEG00000044425	SMG5	100	99.114	ENSG00000198952	SMG5	100	99.114	Homo_sapiens
ENSMNEG00000044425	SMG5	99	67.549	ENSAPOG00000019690	smg5	99	66.798	Acanthochromis_polyacanthus
ENSMNEG00000044425	SMG5	98	92.447	ENSAMEG00000014458	SMG5	100	92.447	Ailuropoda_melanoleuca
ENSMNEG00000044425	SMG5	99	64.943	ENSACIG00000001353	smg5	99	66.667	Amphilophus_citrinellus
ENSMNEG00000044425	SMG5	98	64.729	ENSAOCG00000019483	smg5	93	66.598	Amphiprion_ocellaris
ENSMNEG00000044425	SMG5	98	66.501	ENSAPEG00000022949	smg5	98	66.335	Amphiprion_percula
ENSMNEG00000044425	SMG5	99	65.964	ENSATEG00000005348	smg5	99	67.410	Anabas_testudineus
ENSMNEG00000044425	SMG5	98	78.829	ENSAPLG00000010263	SMG5	100	78.537	Anas_platyrhynchos
ENSMNEG00000044425	SMG5	100	98.130	ENSANAG00000032899	SMG5	100	98.130	Aotus_nancymaae
ENSMNEG00000044425	SMG5	99	64.587	ENSACLG00000009311	smg5	99	66.218	Astatotilapia_calliptera
ENSMNEG00000044425	SMG5	100	95.965	ENSBTAG00000009435	SMG5	100	95.965	Bos_taurus
ENSMNEG00000044425	SMG5	99	44.004	ENSBTAG00000021747	-	99	43.382	Bos_taurus
ENSMNEG00000044425	SMG5	100	98.130	ENSCJAG00000005684	SMG5	100	98.130	Callithrix_jacchus
ENSMNEG00000044425	SMG5	100	94.488	ENSCAFG00000016839	SMG5	100	93.701	Canis_familiaris
ENSMNEG00000044425	SMG5	100	94.488	ENSCAFG00020006061	SMG5	100	93.701	Canis_lupus_dingo
ENSMNEG00000044425	SMG5	100	95.866	ENSCHIG00000007709	SMG5	100	95.866	Capra_hircus
ENSMNEG00000044425	SMG5	99	44.455	ENSCHIG00000006323	-	99	43.457	Capra_hircus
ENSMNEG00000044425	SMG5	100	97.050	ENSTSYG00000004099	SMG5	100	97.050	Carlito_syrichta
ENSMNEG00000044425	SMG5	97	74.848	ENSCAPG00000003631	SMG5	100	75.389	Cavia_aperea
ENSMNEG00000044425	SMG5	100	96.071	ENSCPOG00000015696	SMG5	100	95.776	Cavia_porcellus
ENSMNEG00000044425	SMG5	100	98.130	ENSCCAG00000027409	SMG5	100	98.130	Cebus_capucinus
ENSMNEG00000044425	SMG5	100	99.803	ENSCATG00000030539	SMG5	100	99.803	Cercocebus_atys
ENSMNEG00000044425	SMG5	100	96.365	ENSCLAG00000003983	SMG5	100	96.365	Chinchilla_lanigera
ENSMNEG00000044425	SMG5	100	99.705	ENSCSAG00000002120	SMG5	100	99.705	Chlorocebus_sabaeus
ENSMNEG00000044425	SMG5	54	93.431	ENSCHOG00000008741	-	57	93.431	Choloepus_hoffmanni
ENSMNEG00000044425	SMG5	94	78.600	ENSCPBG00000025848	SMG5	100	78.296	Chrysemys_picta_bellii
ENSMNEG00000044425	SMG5	93	35.233	ENSCING00000008706	-	98	35.221	Ciona_intestinalis
ENSMNEG00000044425	SMG5	100	95.374	ENSCANG00000029208	SMG5	100	95.374	Colobus_angolensis_palliatus
ENSMNEG00000044425	SMG5	100	92.927	ENSCGRG00001006336	Smg5	100	92.534	Cricetulus_griseus_chok1gshd
ENSMNEG00000044425	SMG5	98	92.958	ENSCGRG00000005111	Smg5	100	92.548	Cricetulus_griseus_crigri
ENSMNEG00000044425	SMG5	99	65.500	ENSCSEG00000014220	smg5	92	78.014	Cynoglossus_semilaevis
ENSMNEG00000044425	SMG5	99	60.916	ENSCVAG00000000529	smg5	99	61.613	Cyprinodon_variegatus
ENSMNEG00000044425	SMG5	100	91.634	ENSDNOG00000000051	SMG5	100	91.634	Dasypus_novemcinctus
ENSMNEG00000044425	SMG5	92	36.681	ENSDNOG00000039862	-	100	35.195	Dasypus_novemcinctus
ENSMNEG00000044425	SMG5	100	93.713	ENSDORG00000010382	Smg5	100	93.517	Dipodomys_ordii
ENSMNEG00000044425	SMG5	66	35.256	FBgn0019890	Smg5	62	35.443	Drosophila_melanogaster
ENSMNEG00000044425	SMG5	82	97.087	ENSETEG00000010336	SMG5	89	97.087	Echinops_telfairi
ENSMNEG00000044425	SMG5	90	46.497	ENSEBUG00000003739	smg5	98	46.324	Eptatretus_burgeri
ENSMNEG00000044425	SMG5	100	96.850	ENSEASG00005019122	SMG5	100	96.850	Equus_asinus_asinus
ENSMNEG00000044425	SMG5	100	96.850	ENSECAG00000001389	SMG5	100	96.850	Equus_caballus
ENSMNEG00000044425	SMG5	72	98.559	ENSEEUG00000012690	SMG5	73	98.559	Erinaceus_europaeus
ENSMNEG00000044425	SMG5	99	65.063	ENSELUG00000012585	smg5	99	64.966	Esox_lucius
ENSMNEG00000044425	SMG5	100	93.799	ENSFCAG00000011783	SMG5	100	93.117	Felis_catus
ENSMNEG00000044425	SMG5	58	82.137	ENSFALG00000001166	-	99	82.245	Ficedula_albicollis
ENSMNEG00000044425	SMG5	98	92.951	ENSFDAG00000017388	SMG5	100	92.850	Fukomys_damarensis
ENSMNEG00000044425	SMG5	97	62.159	ENSFHEG00000013939	smg5	95	68.476	Fundulus_heteroclitus
ENSMNEG00000044425	SMG5	99	61.282	ENSGMOG00000007310	smg5	92	76.606	Gadus_morhua
ENSMNEG00000044425	SMG5	99	77.917	ENSGALG00000029918	-	100	77.619	Gallus_gallus
ENSMNEG00000044425	SMG5	100	79.392	ENSGAGG00000016131	SMG5	100	79.202	Gopherus_agassizii
ENSMNEG00000044425	SMG5	100	99.114	ENSGGOG00000010932	SMG5	100	99.114	Gorilla_gorilla
ENSMNEG00000044425	SMG5	99	64.115	ENSHBUG00000008654	smg5	99	65.271	Haplochromis_burtoni
ENSMNEG00000044425	SMG5	100	92.829	ENSHGLG00000019152	SMG5	100	93.026	Heterocephalus_glaber_female
ENSMNEG00000044425	SMG5	90	92.990	ENSHGLG00100015948	SMG5	99	93.209	Heterocephalus_glaber_male
ENSMNEG00000044425	SMG5	86	73.594	ENSHCOG00000010229	smg5	83	78.571	Hippocampus_comes
ENSMNEG00000044425	SMG5	99	61.287	ENSIPUG00000006624	Smg5	99	61.896	Ictalurus_punctatus
ENSMNEG00000044425	SMG5	100	96.460	ENSSTOG00000001780	SMG5	100	96.460	Ictidomys_tridecemlineatus
ENSMNEG00000044425	SMG5	100	93.032	ENSJJAG00000022763	Smg5	100	92.836	Jaculus_jaculus
ENSMNEG00000044425	SMG5	50	59.341	ENSKMAG00000014586	smg5	99	61.333	Kryptolebias_marmoratus
ENSMNEG00000044425	SMG5	99	66.409	ENSLBEG00000002145	smg5	99	66.441	Labrus_bergylta
ENSMNEG00000044425	SMG5	100	65.052	ENSLACG00000010521	SMG5	100	64.957	Latimeria_chalumnae
ENSMNEG00000044425	SMG5	96	78.638	ENSLOCG00000008380	smg5	92	78.673	Lepisosteus_oculatus
ENSMNEG00000044425	SMG5	100	94.390	ENSLAFG00000006241	SMG5	100	94.390	Loxodonta_africana
ENSMNEG00000044425	SMG5	100	99.902	ENSMFAG00000045357	SMG5	100	99.902	Macaca_fascicularis
ENSMNEG00000044425	SMG5	100	99.803	ENSMMUG00000000090	SMG5	100	99.803	Macaca_mulatta
ENSMNEG00000044425	SMG5	100	93.431	ENSMLEG00000041192	SMG5	100	93.431	Mandrillus_leucophaeus
ENSMNEG00000044425	SMG5	99	61.017	ENSMAMG00000010683	smg5	58	56.423	Mastacembelus_armatus
ENSMNEG00000044425	SMG5	99	63.645	ENSMZEG00005015815	smg5	99	64.599	Maylandia_zebra
ENSMNEG00000044425	SMG5	63	58.559	ENSMZEG00005016543	smg5	100	59.125	Maylandia_zebra
ENSMNEG00000044425	SMG5	100	92.043	ENSMAUG00000010381	Smg5	100	91.847	Mesocricetus_auratus
ENSMNEG00000044425	SMG5	55	45.184	ENSMAUG00000000043	-	96	44.444	Mesocricetus_auratus
ENSMNEG00000044425	SMG5	100	97.244	ENSMICG00000002257	SMG5	100	97.244	Microcebus_murinus
ENSMNEG00000044425	SMG5	100	91.667	ENSMOCG00000016590	Smg5	100	91.373	Microtus_ochrogaster
ENSMNEG00000044425	SMG5	99	59.127	ENSMMOG00000017199	smg5	99	59.731	Mola_mola
ENSMNEG00000044425	SMG5	80	38.173	ENSMODG00000004735	-	86	39.467	Monodelphis_domestica
ENSMNEG00000044425	SMG5	97	34.891	ENSMODG00000004511	-	99	34.095	Monodelphis_domestica
ENSMNEG00000044425	SMG5	93	37.073	ENSMODG00000004532	-	83	37.940	Monodelphis_domestica
ENSMNEG00000044425	SMG5	78	37.531	ENSMODG00000010675	-	84	37.666	Monodelphis_domestica
ENSMNEG00000044425	SMG5	87	89.977	ENSMODG00000016901	SMG5	98	90.428	Monodelphis_domestica
ENSMNEG00000044425	SMG5	99	60.711	ENSMALG00000010375	smg5	99	59.591	Monopterus_albus
ENSMNEG00000044425	SMG5	100	92.534	MGP_CAROLIEiJ_G0025163	Smg5	100	98.883	Mus_caroli
ENSMNEG00000044425	SMG5	100	92.731	ENSMUSG00000001415	Smg5	99	98.883	Mus_musculus
ENSMNEG00000044425	SMG5	100	92.345	MGP_PahariEiJ_G0026606	Smg5	100	98.883	Mus_pahari
ENSMNEG00000044425	SMG5	100	92.534	MGP_SPRETEiJ_G0026104	Smg5	100	98.883	Mus_spretus
ENSMNEG00000044425	SMG5	94	92.737	ENSMPUG00000004546	SMG5	100	92.105	Mustela_putorius_furo
ENSMNEG00000044425	SMG5	100	94.912	ENSMLUG00000008518	SMG5	100	94.031	Myotis_lucifugus
ENSMNEG00000044425	SMG5	100	94.002	ENSNGAG00000020706	Smg5	100	93.707	Nannospalax_galili
ENSMNEG00000044425	SMG5	98	44.378	ENSNGAG00000012101	-	98	44.588	Nannospalax_galili
ENSMNEG00000044425	SMG5	97	63.063	ENSNBRG00000004332	smg5	98	64.193	Neolamprologus_brichardi
ENSMNEG00000044425	SMG5	100	99.016	ENSNLEG00000012439	SMG5	100	99.016	Nomascus_leucogenys
ENSMNEG00000044425	SMG5	100	87.906	ENSMEUG00000012834	SMG5	100	87.021	Notamacropus_eugenii
ENSMNEG00000044425	SMG5	100	94.390	ENSOPRG00000009152	SMG5	100	94.390	Ochotona_princeps
ENSMNEG00000044425	SMG5	100	95.571	ENSODEG00000012237	SMG5	100	95.571	Octodon_degus
ENSMNEG00000044425	SMG5	50	59.415	ENSONIG00000008632	smg5	55	55.429	Oreochromis_niloticus
ENSMNEG00000044425	SMG5	98	95.565	ENSOCUG00000012886	SMG5	100	95.565	Oryctolagus_cuniculus
ENSMNEG00000044425	SMG5	89	40.810	ENSOCUG00000023338	-	99	40.700	Oryctolagus_cuniculus
ENSMNEG00000044425	SMG5	99	64.425	ENSORLG00020013127	smg5	99	65.823	Oryzias_latipes_hni
ENSMNEG00000044425	SMG5	99	64.140	ENSORLG00015019014	smg5	99	65.695	Oryzias_latipes_hsok
ENSMNEG00000044425	SMG5	100	95.079	ENSOGAG00000004966	SMG5	100	95.079	Otolemur_garnettii
ENSMNEG00000044425	SMG5	100	95.965	ENSOARG00000005778	SMG5	100	95.965	Ovis_aries
ENSMNEG00000044425	SMG5	99	44.379	ENSOARG00000011963	-	99	43.470	Ovis_aries
ENSMNEG00000044425	SMG5	100	98.819	ENSPPAG00000011996	SMG5	100	98.819	Pan_paniscus
ENSMNEG00000044425	SMG5	98	93.649	ENSPPRG00000011901	SMG5	100	92.944	Panthera_pardus
ENSMNEG00000044425	SMG5	99	85.473	ENSPTIG00000007892	SMG5	98	85.425	Panthera_tigris_altaica
ENSMNEG00000044425	SMG5	100	99.016	ENSPTRG00000023925	SMG5	100	99.016	Pan_troglodytes
ENSMNEG00000044425	SMG5	100	99.016	ENSPTRG00000049282	-	100	99.016	Pan_troglodytes
ENSMNEG00000044425	SMG5	100	99.803	ENSPANG00000011201	SMG5	100	99.803	Papio_anubis
ENSMNEG00000044425	SMG5	99	65.411	ENSPKIG00000009402	smg5	99	65.661	Paramormyrops_kingsleyae
ENSMNEG00000044425	SMG5	98	80.834	ENSPSIG00000015198	SMG5	100	80.476	Pelodiscus_sinensis
ENSMNEG00000044425	SMG5	99	60.331	ENSPMGG00000010465	smg5	99	60.628	Periophthalmus_magnuspinnatus
ENSMNEG00000044425	SMG5	100	93.222	ENSPEMG00000001819	Smg5	100	92.829	Peromyscus_maniculatus_bairdii
ENSMNEG00000044425	SMG5	56	46.060	ENSPEMG00000010022	-	95	44.845	Peromyscus_maniculatus_bairdii
ENSMNEG00000044425	SMG5	99	49.421	ENSPMAG00000000410	smg5	100	49.525	Petromyzon_marinus
ENSMNEG00000044425	SMG5	100	89.391	ENSPCIG00000018938	SMG5	100	89.784	Phascolarctos_cinereus
ENSMNEG00000044425	SMG5	50	60.037	ENSPFOG00000010191	smg5	99	62.087	Poecilia_formosa
ENSMNEG00000044425	SMG5	50	60.111	ENSPLAG00000009332	smg5	99	61.909	Poecilia_latipinna
ENSMNEG00000044425	SMG5	99	65.610	ENSPMEG00000014105	smg5	99	65.226	Poecilia_mexicana
ENSMNEG00000044425	SMG5	50	60.223	ENSPREG00000017713	smg5	99	61.820	Poecilia_reticulata
ENSMNEG00000044425	SMG5	100	99.311	ENSPPYG00000000723	SMG5	100	99.311	Pongo_abelii
ENSMNEG00000044425	SMG5	75	97.790	ENSPCAG00000008412	SMG5	88	85.654	Procavia_capensis
ENSMNEG00000044425	SMG5	100	97.343	ENSPCOG00000004741	SMG5	100	97.343	Propithecus_coquereli
ENSMNEG00000044425	SMG5	100	85.925	ENSPVAG00000016748	SMG5	100	85.925	Pteropus_vampyrus
ENSMNEG00000044425	SMG5	93	63.883	ENSPNYG00000013397	smg5	99	61.062	Pundamilia_nyererei
ENSMNEG00000044425	SMG5	100	92.731	ENSRNOG00000019590	Smg5	100	92.338	Rattus_norvegicus
ENSMNEG00000044425	SMG5	100	99.508	ENSRBIG00000027428	SMG5	100	99.508	Rhinopithecus_bieti
ENSMNEG00000044425	SMG5	100	99.409	ENSRROG00000030035	SMG5	100	99.409	Rhinopithecus_roxellana
ENSMNEG00000044425	SMG5	100	98.130	ENSSBOG00000033339	SMG5	100	98.130	Saimiri_boliviensis_boliviensis
ENSMNEG00000044425	SMG5	98	88.989	ENSSHAG00000014163	SMG5	100	89.389	Sarcophilus_harrisii
ENSMNEG00000044425	SMG5	99	34.390	ENSSHAG00000009572	-	80	42.998	Sarcophilus_harrisii
ENSMNEG00000044425	SMG5	64	39.181	ENSSHAG00000000935	-	82	40.244	Sarcophilus_harrisii
ENSMNEG00000044425	SMG5	88	39.314	ENSSHAG00000000561	-	87	39.314	Sarcophilus_harrisii
ENSMNEG00000044425	SMG5	99	66.148	ENSSFOG00015024175	smg5	99	66.407	Scleropages_formosus
ENSMNEG00000044425	SMG5	99	60.727	ENSSMAG00000013059	smg5	99	62.422	Scophthalmus_maximus
ENSMNEG00000044425	SMG5	50	60.145	ENSSDUG00000007122	smg5	92	77.103	Seriola_dumerili
ENSMNEG00000044425	SMG5	99	60.298	ENSSLDG00000011418	smg5	92	77.830	Seriola_lalandi_dorsalis
ENSMNEG00000044425	SMG5	90	81.025	ENSSARG00000012484	SMG5	100	81.025	Sorex_araneus
ENSMNEG00000044425	SMG5	94	77.452	ENSSPUG00000002260	SMG5	100	76.162	Sphenodon_punctatus
ENSMNEG00000044425	SMG5	91	76.815	ENSSPAG00000014266	smg5	99	65.351	Stegastes_partitus
ENSMNEG00000044425	SMG5	100	96.949	ENSSSCG00000006490	-	100	96.949	Sus_scrofa
ENSMNEG00000044425	SMG5	99	75.074	ENSSSCG00000039308	-	100	75.271	Sus_scrofa
ENSMNEG00000044425	SMG5	99	80.514	ENSTGUG00000003748	-	100	80.273	Taeniopygia_guttata
ENSMNEG00000044425	SMG5	99	63.870	ENSTRUG00000012580	smg5	99	64.479	Takifugu_rubripes
ENSMNEG00000044425	SMG5	99	65.407	ENSTNIG00000010303	smg5	99	65.179	Tetraodon_nigroviridis
ENSMNEG00000044425	SMG5	60	100.000	ENSTBEG00000002777	SMG5	60	100.000	Tupaia_belangeri
ENSMNEG00000044425	SMG5	100	91.634	ENSTTRG00000001401	SMG5	100	91.634	Tursiops_truncatus
ENSMNEG00000044425	SMG5	100	93.307	ENSUAMG00000013721	SMG5	100	92.717	Ursus_americanus
ENSMNEG00000044425	SMG5	98	88.844	ENSUMAG00000018041	SMG5	97	88.241	Ursus_maritimus
ENSMNEG00000044425	SMG5	98	86.781	ENSVPAG00000009446	SMG5	99	86.781	Vicugna_pacos
ENSMNEG00000044425	SMG5	100	94.193	ENSVVUG00000005887	SMG5	100	93.602	Vulpes_vulpes
ENSMNEG00000044425	SMG5	77	65.826	ENSXETG00000033791	SMG5	99	65.069	Xenopus_tropicalis
ENSMNEG00000044425	SMG5	99	65.667	ENSXMAG00000013499	smg5	99	65.673	Xiphophorus_maculatus