EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMNEG00000044592 (Gene tree)
Gene ID: 105474287
Gene Symbol: SMG6
Alias: C17orf31|EST1A|KIAA0732|SMG-6
Full Name: SMG6%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Macaca_nemestrina
Status: putative
Strand: Minus strand
Length: 253838 bases
Position: chrKQ004719.1:2190715-2444552
Accession: 105474287
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMNEP00000043967	EST1	PF10374.9	6.3e-15	1	1
ENSMNEP00000043964	EST1	PF10374.9	6.3e-15	1	1
ENSMNEP00000043964	EST1_DNA_bind	PF10373.9	5e-38	1	1
ENSMNEP00000043967	EST1_DNA_bind	PF10373.9	3.5e-35	1	1
ENSMNEP00000043967	PIN_4	PF13638.6	7.3e-21	1	1
ENSMNEP00000043964	PIN_4	PF13638.6	7.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMNET00000068475	SMG6-202	4134	-	ENSMNEP00000043967	1377 (aa)	-	A0A2K6E724
ENSMNET00000068472	SMG6-201	4164	XM_011728853	ENSMNEP00000043964	1387 (aa)	-	A0A2K6E722

Gene Model

Click here to download ENSMNEG00000044592's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMNEG00000044592's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMNEG00000044592	SMG6	100	91.989	ENSG00000070366	SMG6	100	99.217	Homo_sapiens
ENSMNEG00000044592	SMG6	73	56.592	ENSAPOG00000019448	smg6	74	52.697	Acanthochromis_polyacanthus
ENSMNEG00000044592	SMG6	100	88.686	ENSAMEG00000007632	SMG6	100	88.686	Ailuropoda_melanoleuca
ENSMNEG00000044592	SMG6	72	57.562	ENSACIG00000012997	smg6	78	53.735	Amphilophus_citrinellus
ENSMNEG00000044592	SMG6	73	56.565	ENSAOCG00000002630	smg6	74	52.858	Amphiprion_ocellaris
ENSMNEG00000044592	SMG6	83	52.760	ENSAPEG00000019101	smg6	74	52.937	Amphiprion_percula
ENSMNEG00000044592	SMG6	86	52.280	ENSATEG00000006483	smg6	73	52.767	Anabas_testudineus
ENSMNEG00000044592	SMG6	87	55.031	ENSACAG00000011783	SMG6	99	56.402	Anolis_carolinensis
ENSMNEG00000044592	SMG6	100	91.145	ENSANAG00000035760	SMG6	100	91.145	Aotus_nancymaae
ENSMNEG00000044592	SMG6	71	56.100	ENSACLG00000005288	smg6	84	51.932	Astatotilapia_calliptera
ENSMNEG00000044592	SMG6	68	60.263	ENSAMXG00000017326	smg6	99	48.789	Astyanax_mexicanus
ENSMNEG00000044592	SMG6	100	88.616	ENSBTAG00000000267	SMG6	100	88.616	Bos_taurus
ENSMNEG00000044592	SMG6	100	90.513	ENSCJAG00000001820	SMG6	100	90.513	Callithrix_jacchus
ENSMNEG00000044592	SMG6	100	88.545	ENSCAFG00000019260	SMG6	100	88.545	Canis_familiaris
ENSMNEG00000044592	SMG6	100	88.545	ENSCAFG00020009770	SMG6	100	88.545	Canis_lupus_dingo
ENSMNEG00000044592	SMG6	100	88.475	ENSCHIG00000021998	SMG6	100	88.475	Capra_hircus
ENSMNEG00000044592	SMG6	100	89.311	ENSTSYG00000003406	SMG6	100	97.065	Carlito_syrichta
ENSMNEG00000044592	SMG6	90	83.607	ENSCAPG00000016197	SMG6	99	82.670	Cavia_aperea
ENSMNEG00000044592	SMG6	100	85.955	ENSCPOG00000014878	SMG6	97	92.544	Cavia_porcellus
ENSMNEG00000044592	SMG6	100	91.075	ENSCCAG00000035801	SMG6	100	91.075	Cebus_capucinus
ENSMNEG00000044592	SMG6	100	93.886	ENSCATG00000031956	SMG6	100	93.886	Cercocebus_atys
ENSMNEG00000044592	SMG6	100	87.561	ENSCLAG00000006748	SMG6	94	94.643	Chinchilla_lanigera
ENSMNEG00000044592	SMG6	100	94.238	ENSCSAG00000013800	SMG6	100	94.238	Chlorocebus_sabaeus
ENSMNEG00000044592	SMG6	100	68.837	ENSCPBG00000020369	SMG6	100	69.391	Chrysemys_picta_bellii
ENSMNEG00000044592	SMG6	98	93.683	ENSCANG00000031764	SMG6	100	100.000	Colobus_angolensis_palliatus
ENSMNEG00000044592	SMG6	56	87.661	ENSCGRG00001019595	Smg6	98	87.661	Cricetulus_griseus_chok1gshd
ENSMNEG00000044592	SMG6	98	80.650	ENSCGRG00000007782	Smg6	100	80.794	Cricetulus_griseus_crigri
ENSMNEG00000044592	SMG6	87	51.632	ENSCSEG00000012757	smg6	95	46.898	Cynoglossus_semilaevis
ENSMNEG00000044592	SMG6	71	55.113	ENSCVAG00000012789	smg6	74	51.099	Cyprinodon_variegatus
ENSMNEG00000044592	SMG6	98	52.983	ENSDARG00000100481	smg6	76	54.056	Danio_rerio
ENSMNEG00000044592	SMG6	100	88.053	ENSDNOG00000048283	SMG6	100	88.053	Dasypus_novemcinctus
ENSMNEG00000044592	SMG6	100	84.384	ENSDORG00000016614	Smg6	94	97.297	Dipodomys_ordii
ENSMNEG00000044592	SMG6	93	100.000	ENSETEG00000016790	SMG6	93	100.000	Echinops_telfairi
ENSMNEG00000044592	SMG6	73	47.961	ENSEBUG00000005059	smg6	66	47.868	Eptatretus_burgeri
ENSMNEG00000044592	SMG6	99	89.092	ENSEASG00005009318	SMG6	99	89.092	Equus_asinus_asinus
ENSMNEG00000044592	SMG6	99	88.811	ENSECAG00000006519	SMG6	99	88.811	Equus_caballus
ENSMNEG00000044592	SMG6	95	85.056	ENSEEUG00000003493	SMG6	95	85.056	Erinaceus_europaeus
ENSMNEG00000044592	SMG6	71	57.792	ENSELUG00000005934	smg6	69	53.072	Esox_lucius
ENSMNEG00000044592	SMG6	100	89.318	ENSFCAG00000028817	SMG6	100	89.318	Felis_catus
ENSMNEG00000044592	SMG6	98	68.350	ENSFALG00000006538	SMG6	100	68.421	Ficedula_albicollis
ENSMNEG00000044592	SMG6	100	87.412	ENSFDAG00000015106	SMG6	95	92.920	Fukomys_damarensis
ENSMNEG00000044592	SMG6	83	51.286	ENSFHEG00000013282	smg6	75	51.442	Fundulus_heteroclitus
ENSMNEG00000044592	SMG6	54	69.159	ENSGMOG00000019077	smg6	68	69.159	Gadus_morhua
ENSMNEG00000044592	SMG6	100	68.417	ENSGALG00000003108	SMG6	98	68.487	Gallus_gallus
ENSMNEG00000044592	SMG6	83	51.527	ENSGAFG00000000379	smg6	74	51.759	Gambusia_affinis
ENSMNEG00000044592	SMG6	91	52.278	ENSGACG00000020521	smg6	100	51.745	Gasterosteus_aculeatus
ENSMNEG00000044592	SMG6	98	68.604	ENSGAGG00000025617	SMG6	100	69.171	Gopherus_agassizii
ENSMNEG00000044592	SMG6	100	93.043	ENSGGOG00000017156	SMG6	100	93.043	Gorilla_gorilla
ENSMNEG00000044592	SMG6	87	51.008	ENSHBUG00000021311	smg6	77	52.093	Haplochromis_burtoni
ENSMNEG00000044592	SMG6	100	87.298	ENSHGLG00000012882	SMG6	95	93.363	Heterocephalus_glaber_female
ENSMNEG00000044592	SMG6	100	87.368	ENSHGLG00100017815	SMG6	95	93.363	Heterocephalus_glaber_male
ENSMNEG00000044592	SMG6	71	57.074	ENSHCOG00000008761	smg6	97	51.752	Hippocampus_comes
ENSMNEG00000044592	SMG6	83	52.923	ENSIPUG00000012493	smg6	75	52.400	Ictalurus_punctatus
ENSMNEG00000044592	SMG6	100	89.037	ENSSTOG00000028127	SMG6	97	94.760	Ictidomys_tridecemlineatus
ENSMNEG00000044592	SMG6	78	82.651	ENSJJAG00000015367	Smg6	95	80.899	Jaculus_jaculus
ENSMNEG00000044592	SMG6	72	56.859	ENSKMAG00000000279	smg6	91	46.649	Kryptolebias_marmoratus
ENSMNEG00000044592	SMG6	86	50.452	ENSLBEG00000002184	smg6	91	46.440	Labrus_bergylta
ENSMNEG00000044592	SMG6	56	57.373	ENSLACG00000000806	-	97	57.283	Latimeria_chalumnae
ENSMNEG00000044592	SMG6	73	63.346	ENSLOCG00000006448	smg6	100	53.755	Lepisosteus_oculatus
ENSMNEG00000044592	SMG6	100	88.124	ENSLAFG00000001261	SMG6	100	88.124	Loxodonta_africana
ENSMNEG00000044592	SMG6	100	94.589	ENSMFAG00000003394	SMG6	100	94.589	Macaca_fascicularis
ENSMNEG00000044592	SMG6	100	94.589	ENSMMUG00000023161	SMG6	100	94.589	Macaca_mulatta
ENSMNEG00000044592	SMG6	98	95.099	ENSMLEG00000029353	SMG6	100	94.617	Mandrillus_leucophaeus
ENSMNEG00000044592	SMG6	83	53.840	ENSMAMG00000020119	smg6	79	53.925	Mastacembelus_armatus
ENSMNEG00000044592	SMG6	71	56.906	ENSMZEG00005024736	smg6	77	52.090	Maylandia_zebra
ENSMNEG00000044592	SMG6	73	61.900	ENSMGAG00000005401	-	99	61.900	Meleagris_gallopavo
ENSMNEG00000044592	SMG6	100	90.429	ENSMICG00000012913	SMG6	100	90.429	Microcebus_murinus
ENSMNEG00000044592	SMG6	100	46.528	ENSMMOG00000010883	smg6	100	46.823	Mola_mola
ENSMNEG00000044592	SMG6	100	81.697	ENSMODG00000010622	SMG6	100	81.697	Monodelphis_domestica
ENSMNEG00000044592	SMG6	83	52.570	ENSMALG00000001106	smg6	73	52.996	Monopterus_albus
ENSMNEG00000044592	SMG6	100	87.131	MGP_CAROLIEiJ_G0016729	Smg6	95	94.248	Mus_caroli
ENSMNEG00000044592	SMG6	100	86.920	ENSMUSG00000038290	Smg6	95	94.690	Mus_musculus
ENSMNEG00000044592	SMG6	100	86.709	MGP_PahariEiJ_G0017866	Smg6	95	94.690	Mus_pahari
ENSMNEG00000044592	SMG6	100	86.920	MGP_SPRETEiJ_G0017572	Smg6	96	93.860	Mus_spretus
ENSMNEG00000044592	SMG6	100	88.545	ENSMPUG00000013046	SMG6	100	88.545	Mustela_putorius_furo
ENSMNEG00000044592	SMG6	100	88.616	ENSMLUG00000005739	SMG6	100	88.616	Myotis_lucifugus
ENSMNEG00000044592	SMG6	98	85.417	ENSNGAG00000007287	Smg6	99	89.316	Nannospalax_galili
ENSMNEG00000044592	SMG6	88	50.562	ENSNBRG00000009511	smg6	85	51.567	Neolamprologus_brichardi
ENSMNEG00000044592	SMG6	98	92.418	ENSNLEG00000017171	SMG6	100	99.413	Nomascus_leucogenys
ENSMNEG00000044592	SMG6	95	94.727	ENSMEUG00000015804	SMG6	100	78.423	Notamacropus_eugenii
ENSMNEG00000044592	SMG6	57	98.387	ENSOPRG00000000579	SMG6	85	97.368	Ochotona_princeps
ENSMNEG00000044592	SMG6	100	80.986	ENSODEG00000008038	SMG6	100	81.408	Octodon_degus
ENSMNEG00000044592	SMG6	100	49.262	ENSONIG00000005594	smg6	100	50.401	Oreochromis_niloticus
ENSMNEG00000044592	SMG6	100	88.405	ENSOCUG00000013018	SMG6	100	88.545	Oryctolagus_cuniculus
ENSMNEG00000044592	SMG6	83	52.802	ENSORLG00000003317	smg6	74	53.029	Oryzias_latipes
ENSMNEG00000044592	SMG6	83	52.727	ENSORLG00020015343	smg6	74	52.561	Oryzias_latipes_hni
ENSMNEG00000044592	SMG6	83	52.681	ENSORLG00015020454	smg6	74	52.830	Oryzias_latipes_hsok
ENSMNEG00000044592	SMG6	83	51.694	ENSOMEG00000010838	smg6	75	52.133	Oryzias_melastigma
ENSMNEG00000044592	SMG6	100	89.747	ENSOGAG00000004483	SMG6	100	89.747	Otolemur_garnettii
ENSMNEG00000044592	SMG6	100	86.728	ENSOARG00000015076	SMG6	100	88.193	Ovis_aries
ENSMNEG00000044592	SMG6	100	92.832	ENSPPAG00000043296	SMG6	100	92.832	Pan_paniscus
ENSMNEG00000044592	SMG6	100	89.389	ENSPPRG00000014581	SMG6	100	89.389	Panthera_pardus
ENSMNEG00000044592	SMG6	98	89.345	ENSPTIG00000008925	SMG6	100	97.260	Panthera_tigris_altaica
ENSMNEG00000044592	SMG6	100	92.832	ENSPTRG00000008544	SMG6	100	99.217	Pan_troglodytes
ENSMNEG00000044592	SMG6	100	94.167	ENSPANG00000024588	SMG6	100	94.167	Papio_anubis
ENSMNEG00000044592	SMG6	88	66.979	ENSPSIG00000006660	SMG6	96	67.057	Pelodiscus_sinensis
ENSMNEG00000044592	SMG6	100	48.146	ENSPMGG00000000844	smg6	100	57.143	Periophthalmus_magnuspinnatus
ENSMNEG00000044592	SMG6	100	87.474	ENSPEMG00000020707	Smg6	97	93.805	Peromyscus_maniculatus_bairdii
ENSMNEG00000044592	SMG6	100	49.465	ENSPFOG00000012035	smg6	100	49.430	Poecilia_formosa
ENSMNEG00000044592	SMG6	76	53.938	ENSPLAG00000017660	smg6	74	51.648	Poecilia_latipinna
ENSMNEG00000044592	SMG6	76	53.669	ENSPMEG00000000258	smg6	74	51.884	Poecilia_mexicana
ENSMNEG00000044592	SMG6	83	52.557	ENSPREG00000010066	smg6	74	52.400	Poecilia_reticulata
ENSMNEG00000044592	SMG6	100	87.316	ENSPPYG00000007790	SMG6	100	87.316	Pongo_abelii
ENSMNEG00000044592	SMG6	100	84.296	ENSPCAG00000000552	SMG6	100	84.507	Procavia_capensis
ENSMNEG00000044592	SMG6	100	90.091	ENSPCOG00000020925	SMG6	100	90.091	Propithecus_coquereli
ENSMNEG00000044592	SMG6	86	100.000	ENSPVAG00000002159	SMG6	86	100.000	Pteropus_vampyrus
ENSMNEG00000044592	SMG6	88	51.308	ENSPNYG00000024151	smg6	100	47.462	Pundamilia_nyererei
ENSMNEG00000044592	SMG6	85	52.899	ENSPNAG00000015480	smg6	90	48.158	Pygocentrus_nattereri
ENSMNEG00000044592	SMG6	100	86.990	ENSRNOG00000003041	Smg6	100	86.990	Rattus_norvegicus
ENSMNEG00000044592	SMG6	100	93.535	ENSRBIG00000024746	SMG6	100	93.535	Rhinopithecus_bieti
ENSMNEG00000044592	SMG6	100	93.996	ENSRROG00000030423	SMG6	100	99.609	Rhinopithecus_roxellana
ENSMNEG00000044592	SMG6	100	91.005	ENSSBOG00000022518	SMG6	100	89.389	Saimiri_boliviensis_boliviensis
ENSMNEG00000044592	SMG6	98	81.308	ENSSHAG00000010045	SMG6	98	81.308	Sarcophilus_harrisii
ENSMNEG00000044592	SMG6	71	59.608	ENSSFOG00015005436	smg6	73	52.604	Scleropages_formosus
ENSMNEG00000044592	SMG6	83	53.152	ENSSMAG00000019777	smg6	73	52.771	Scophthalmus_maximus
ENSMNEG00000044592	SMG6	83	52.776	ENSSDUG00000016412	smg6	74	52.821	Seriola_dumerili
ENSMNEG00000044592	SMG6	85	49.021	ENSSLDG00000020747	smg6	83	49.361	Seriola_lalandi_dorsalis
ENSMNEG00000044592	SMG6	99	67.085	ENSSPUG00000007152	SMG6	99	67.155	Sphenodon_punctatus
ENSMNEG00000044592	SMG6	83	52.441	ENSSPAG00000015633	smg6	74	52.913	Stegastes_partitus
ENSMNEG00000044592	SMG6	100	88.062	ENSSSCG00000017826	SMG6	100	88.062	Sus_scrofa
ENSMNEG00000044592	SMG6	100	68.816	ENSTGUG00000005836	SMG6	100	68.956	Taeniopygia_guttata
ENSMNEG00000044592	SMG6	100	46.492	ENSTRUG00000000358	smg6	100	46.559	Takifugu_rubripes
ENSMNEG00000044592	SMG6	100	47.878	ENSTNIG00000016164	smg6	100	47.981	Tetraodon_nigroviridis
ENSMNEG00000044592	SMG6	100	85.292	ENSTBEG00000011424	SMG6	100	85.292	Tupaia_belangeri
ENSMNEG00000044592	SMG6	91	87.580	ENSTTRG00000001175	SMG6	91	87.580	Tursiops_truncatus
ENSMNEG00000044592	SMG6	100	88.710	ENSUAMG00000025152	SMG6	100	88.640	Ursus_americanus
ENSMNEG00000044592	SMG6	98	88.985	ENSUMAG00000009306	SMG6	100	88.985	Ursus_maritimus
ENSMNEG00000044592	SMG6	84	92.593	ENSVPAG00000000225	SMG6	88	92.593	Vicugna_pacos
ENSMNEG00000044592	SMG6	100	88.405	ENSVVUG00000021727	SMG6	100	88.405	Vulpes_vulpes
ENSMNEG00000044592	SMG6	98	57.703	ENSXETG00000023799	SMG6	100	57.561	Xenopus_tropicalis
ENSMNEG00000044592	SMG6	71	57.369	ENSXCOG00000009867	smg6	74	52.720	Xiphophorus_couchianus
ENSMNEG00000044592	SMG6	83	51.994	ENSXMAG00000010321	smg6	87	46.957	Xiphophorus_maculatus