EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMNEG00000044646 (Gene tree)
Gene ID: 105467998
Gene Symbol: TRUB1
Alias: PUS4
Full Name: TruB pseudouridine synthase family member 1
Gene Type: protein_coding
Species: Macaca_nemestrina
Status: putative
Strand: Plus strand
Length: 36161 bases
Position: chrKQ004686.1:6969884-7006044
Accession: 105467998
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMNEP00000044071	TruB_N	PF01509.18	1.5e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMNET00000068580	TRUB1-201	1023	XM_011717875	ENSMNEP00000044071	340 (aa)	XP_011716177	A0A2K6E7D6

Gene Model

Click here to download ENSMNEG00000044646's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMNEG00000044646's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMNEG00000044646	TRUB1	63	30.837	ENSMNEG00000011189	TRUB2	68	30.837

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMNEG00000044646	TRUB1	100	93.143	ENSG00000165832	TRUB1	100	93.143	Homo_sapiens
ENSMNEG00000044646	TRUB1	69	63.673	ENSAPOG00000020565	trub1	89	63.008	Acanthochromis_polyacanthus
ENSMNEG00000044646	TRUB1	96	89.053	ENSAMEG00000014931	TRUB1	99	88.889	Ailuropoda_melanoleuca
ENSMNEG00000044646	TRUB1	81	59.075	ENSACIG00000003060	trub1	94	59.075	Amphilophus_citrinellus
ENSMNEG00000044646	TRUB1	68	64.979	ENSAOCG00000017188	trub1	89	63.008	Amphiprion_ocellaris
ENSMNEG00000044646	TRUB1	69	63.008	ENSAPEG00000015209	trub1	89	62.602	Amphiprion_percula
ENSMNEG00000044646	TRUB1	68	63.900	ENSATEG00000023291	trub1	86	63.900	Anabas_testudineus
ENSMNEG00000044646	TRUB1	78	71.273	ENSAPLG00000006808	TRUB1	99	71.273	Anas_platyrhynchos
ENSMNEG00000044646	TRUB1	76	66.914	ENSACAG00000009282	TRUB1	97	66.914	Anolis_carolinensis
ENSMNEG00000044646	TRUB1	96	93.750	ENSANAG00000022870	TRUB1	100	93.162	Aotus_nancymaae
ENSMNEG00000044646	TRUB1	71	62.302	ENSACLG00000000823	trub1	91	61.905	Astatotilapia_calliptera
ENSMNEG00000044646	TRUB1	77	59.779	ENSAMXG00000015845	trub1	90	59.779	Astyanax_mexicanus
ENSMNEG00000044646	TRUB1	98	88.012	ENSBTAG00000012955	TRUB1	99	87.464	Bos_taurus
ENSMNEG00000044646	TRUB1	100	93.162	ENSCJAG00000047815	TRUB1	100	93.162	Callithrix_jacchus
ENSMNEG00000044646	TRUB1	99	89.685	ENSCAFG00000011688	TRUB1	99	89.685	Canis_familiaris
ENSMNEG00000044646	TRUB1	99	89.971	ENSCAFG00020013237	TRUB1	99	89.971	Canis_lupus_dingo
ENSMNEG00000044646	TRUB1	98	88.596	ENSCHIG00000020884	TRUB1	99	88.286	Capra_hircus
ENSMNEG00000044646	TRUB1	100	86.895	ENSTSYG00000000446	TRUB1	100	88.034	Carlito_syrichta
ENSMNEG00000044646	TRUB1	72	79.528	ENSCAPG00000017088	TRUB1	100	79.528	Cavia_aperea
ENSMNEG00000044646	TRUB1	69	80.000	ENSCPOG00000040236	-	100	80.000	Cavia_porcellus
ENSMNEG00000044646	TRUB1	70	73.790	ENSCPOG00000030129	-	86	73.387	Cavia_porcellus
ENSMNEG00000044646	TRUB1	96	93.175	ENSCCAG00000028842	TRUB1	100	92.308	Cebus_capucinus
ENSMNEG00000044646	TRUB1	100	94.857	ENSCATG00000033431	TRUB1	100	94.857	Cercocebus_atys
ENSMNEG00000044646	TRUB1	69	83.673	ENSCLAG00000008664	TRUB1	100	83.673	Chinchilla_lanigera
ENSMNEG00000044646	TRUB1	100	94.857	ENSCSAG00000004891	TRUB1	100	94.857	Chlorocebus_sabaeus
ENSMNEG00000044646	TRUB1	99	74.277	ENSCHOG00000011931	TRUB1	99	74.277	Choloepus_hoffmanni
ENSMNEG00000044646	TRUB1	77	74.632	ENSCPBG00000003051	TRUB1	94	74.632	Chrysemys_picta_bellii
ENSMNEG00000044646	TRUB1	100	95.143	ENSCANG00000029445	TRUB1	100	95.143	Colobus_angolensis_palliatus
ENSMNEG00000044646	TRUB1	79	74.643	ENSCGRG00001010322	-	79	74.830	Cricetulus_griseus_chok1gshd
ENSMNEG00000044646	TRUB1	72	81.890	ENSCGRG00001016772	-	90	74.411	Cricetulus_griseus_chok1gshd
ENSMNEG00000044646	TRUB1	79	83.571	ENSCGRG00000010806	Trub1	91	83.165	Cricetulus_griseus_crigri
ENSMNEG00000044646	TRUB1	72	57.812	ENSCSEG00000011261	trub1	97	52.492	Cynoglossus_semilaevis
ENSMNEG00000044646	TRUB1	73	60.853	ENSCVAG00000008791	trub1	82	59.328	Cyprinodon_variegatus
ENSMNEG00000044646	TRUB1	73	61.390	ENSDARG00000053805	trub1	89	61.390	Danio_rerio
ENSMNEG00000044646	TRUB1	97	83.529	ENSDNOG00000001069	TRUB1	99	82.857	Dasypus_novemcinctus
ENSMNEG00000044646	TRUB1	99	85.387	ENSDORG00000010431	Trub1	99	84.241	Dipodomys_ordii
ENSMNEG00000044646	TRUB1	80	72.059	ENSETEG00000009183	TRUB1	81	71.084	Echinops_telfairi
ENSMNEG00000044646	TRUB1	96	89.583	ENSEASG00005014739	TRUB1	99	89.398	Equus_asinus_asinus
ENSMNEG00000044646	TRUB1	96	89.583	ENSECAG00000007177	TRUB1	99	89.398	Equus_caballus
ENSMNEG00000044646	TRUB1	99	72.346	ENSEEUG00000013993	TRUB1	99	73.743	Erinaceus_europaeus
ENSMNEG00000044646	TRUB1	69	64.082	ENSELUG00000000502	trub1	86	64.082	Esox_lucius
ENSMNEG00000044646	TRUB1	85	91.000	ENSFCAG00000031927	TRUB1	99	88.218	Felis_catus
ENSMNEG00000044646	TRUB1	68	70.833	ENSFALG00000002232	TRUB1	92	70.833	Ficedula_albicollis
ENSMNEG00000044646	TRUB1	69	81.633	ENSFDAG00000008140	TRUB1	100	81.633	Fukomys_damarensis
ENSMNEG00000044646	TRUB1	69	62.041	ENSFHEG00000004016	trub1	84	62.041	Fundulus_heteroclitus
ENSMNEG00000044646	TRUB1	77	70.588	ENSGALG00000009091	TRUB1	96	70.588	Gallus_gallus
ENSMNEG00000044646	TRUB1	69	61.475	ENSGAFG00000009193	trub1	86	61.475	Gambusia_affinis
ENSMNEG00000044646	TRUB1	54	62.564	ENSGACG00000015387	trub1	96	62.051	Gasterosteus_aculeatus
ENSMNEG00000044646	TRUB1	82	73.448	ENSGAGG00000009758	TRUB1	81	73.852	Gopherus_agassizii
ENSMNEG00000044646	TRUB1	100	93.714	ENSGGOG00000004583	TRUB1	100	93.714	Gorilla_gorilla
ENSMNEG00000044646	TRUB1	71	62.302	ENSHBUG00000016787	trub1	91	61.905	Haplochromis_burtoni
ENSMNEG00000044646	TRUB1	99	83.095	ENSHGLG00000015314	TRUB1	99	83.095	Heterocephalus_glaber_female
ENSMNEG00000044646	TRUB1	69	80.408	ENSHGLG00100009183	TRUB1	100	80.408	Heterocephalus_glaber_male
ENSMNEG00000044646	TRUB1	69	63.265	ENSHCOG00000017877	trub1	89	62.857	Hippocampus_comes
ENSMNEG00000044646	TRUB1	78	59.783	ENSIPUG00000017559	trub1	97	59.783	Ictalurus_punctatus
ENSMNEG00000044646	TRUB1	89	88.535	ENSSTOG00000003641	TRUB1	99	83.668	Ictidomys_tridecemlineatus
ENSMNEG00000044646	TRUB1	99	80.516	ENSJJAG00000011800	Trub1	99	80.229	Jaculus_jaculus
ENSMNEG00000044646	TRUB1	71	61.089	ENSKMAG00000006232	trub1	92	61.089	Kryptolebias_marmoratus
ENSMNEG00000044646	TRUB1	69	62.195	ENSLBEG00000026722	trub1	92	59.023	Labrus_bergylta
ENSMNEG00000044646	TRUB1	78	67.754	ENSLACG00000014885	TRUB1	92	67.754	Latimeria_chalumnae
ENSMNEG00000044646	TRUB1	77	65.568	ENSLOCG00000012979	trub1	93	65.201	Lepisosteus_oculatus
ENSMNEG00000044646	TRUB1	100	76.257	ENSLAFG00000015452	TRUB1	100	77.095	Loxodonta_africana
ENSMNEG00000044646	TRUB1	100	95.143	ENSMFAG00000031767	TRUB1	100	95.143	Macaca_fascicularis
ENSMNEG00000044646	TRUB1	100	95.429	ENSMMUG00000001902	TRUB1	100	95.429	Macaca_mulatta
ENSMNEG00000044646	TRUB1	100	94.857	ENSMLEG00000042655	TRUB1	100	94.857	Mandrillus_leucophaeus
ENSMNEG00000044646	TRUB1	71	62.302	ENSMZEG00005024095	trub1	91	61.905	Maylandia_zebra
ENSMNEG00000044646	TRUB1	77	69.853	ENSMGAG00000011135	TRUB1	93	69.853	Meleagris_gallopavo
ENSMNEG00000044646	TRUB1	85	80.537	ENSMAUG00000011101	Trub1	88	80.602	Mesocricetus_auratus
ENSMNEG00000044646	TRUB1	99	90.544	ENSMICG00000016324	TRUB1	99	90.544	Microcebus_murinus
ENSMNEG00000044646	TRUB1	91	79.193	ENSMOCG00000017759	Trub1	90	83.390	Microtus_ochrogaster
ENSMNEG00000044646	TRUB1	81	77.972	ENSMODG00000009676	TRUB1	81	76.351	Monodelphis_domestica
ENSMNEG00000044646	TRUB1	99	76.791	MGP_CAROLIEiJ_G0023100	Trub1	99	75.645	Mus_caroli
ENSMNEG00000044646	TRUB1	99	75.645	ENSMUSG00000025086	Trub1	99	74.499	Mus_musculus
ENSMNEG00000044646	TRUB1	99	77.077	MGP_PahariEiJ_G0014588	Trub1	99	75.931	Mus_pahari
ENSMNEG00000044646	TRUB1	99	75.931	MGP_SPRETEiJ_G0024021	Trub1	99	74.785	Mus_spretus
ENSMNEG00000044646	TRUB1	86	93.023	ENSMPUG00000003556	TRUB1	99	90.831	Mustela_putorius_furo
ENSMNEG00000044646	TRUB1	96	84.478	ENSMLUG00000017686	TRUB1	100	82.621	Myotis_lucifugus
ENSMNEG00000044646	TRUB1	99	81.375	ENSNGAG00000018682	Trub1	99	81.375	Nannospalax_galili
ENSMNEG00000044646	TRUB1	69	63.415	ENSNBRG00000023393	trub1	88	63.008	Neolamprologus_brichardi
ENSMNEG00000044646	TRUB1	100	93.714	ENSNLEG00000016345	TRUB1	100	93.714	Nomascus_leucogenys
ENSMNEG00000044646	TRUB1	56	83.582	ENSMEUG00000006603	TRUB1	78	81.043	Notamacropus_eugenii
ENSMNEG00000044646	TRUB1	86	81.728	ENSOPRG00000009371	TRUB1	87	81.605	Ochotona_princeps
ENSMNEG00000044646	TRUB1	99	81.375	ENSODEG00000010854	TRUB1	99	81.375	Octodon_degus
ENSMNEG00000044646	TRUB1	69	63.008	ENSONIG00000007249	trub1	89	62.602	Oreochromis_niloticus
ENSMNEG00000044646	TRUB1	78	75.547	ENSOANG00000001556	TRUB1	93	73.498	Ornithorhynchus_anatinus
ENSMNEG00000044646	TRUB1	86	84.053	ENSOCUG00000009456	TRUB1	99	79.656	Oryctolagus_cuniculus
ENSMNEG00000044646	TRUB1	68	63.900	ENSORLG00000029719	trub1	86	63.485	Oryzias_latipes
ENSMNEG00000044646	TRUB1	68	63.485	ENSORLG00020016767	trub1	85	63.071	Oryzias_latipes_hni
ENSMNEG00000044646	TRUB1	68	63.485	ENSORLG00015014728	trub1	86	63.071	Oryzias_latipes_hsok
ENSMNEG00000044646	TRUB1	73	61.390	ENSOMEG00000014556	trub1	85	62.810	Oryzias_melastigma
ENSMNEG00000044646	TRUB1	99	89.685	ENSOGAG00000015895	TRUB1	99	89.685	Otolemur_garnettii
ENSMNEG00000044646	TRUB1	84	89.404	ENSOARG00000015591	TRUB1	99	84.270	Ovis_aries
ENSMNEG00000044646	TRUB1	100	93.714	ENSPPAG00000043645	TRUB1	100	93.714	Pan_paniscus
ENSMNEG00000044646	TRUB1	96	88.060	ENSPPRG00000007096	TRUB1	99	87.644	Panthera_pardus
ENSMNEG00000044646	TRUB1	96	88.358	ENSPTIG00000006378	TRUB1	99	87.931	Panthera_tigris_altaica
ENSMNEG00000044646	TRUB1	100	93.714	ENSPTRG00000002964	TRUB1	100	93.714	Pan_troglodytes
ENSMNEG00000044646	TRUB1	100	94.857	ENSPANG00000020712	TRUB1	100	94.857	Papio_anubis
ENSMNEG00000044646	TRUB1	77	72.426	ENSPSIG00000012877	TRUB1	93	72.426	Pelodiscus_sinensis
ENSMNEG00000044646	TRUB1	69	61.224	ENSPMGG00000000075	trub1	88	60.816	Periophthalmus_magnuspinnatus
ENSMNEG00000044646	TRUB1	85	81.000	ENSPEMG00000011156	Trub1	88	81.208	Peromyscus_maniculatus_bairdii
ENSMNEG00000044646	TRUB1	81	77.273	ENSPCIG00000009729	TRUB1	79	76.370	Phascolarctos_cinereus
ENSMNEG00000044646	TRUB1	69	60.408	ENSPFOG00000009950	trub1	90	60.408	Poecilia_formosa
ENSMNEG00000044646	TRUB1	69	60.408	ENSPLAG00000013855	trub1	86	60.408	Poecilia_latipinna
ENSMNEG00000044646	TRUB1	69	60.408	ENSPMEG00000009064	trub1	88	60.408	Poecilia_mexicana
ENSMNEG00000044646	TRUB1	69	61.224	ENSPREG00000003343	trub1	88	61.224	Poecilia_reticulata
ENSMNEG00000044646	TRUB1	96	93.472	ENSPPYG00000002676	TRUB1	100	93.429	Pongo_abelii
ENSMNEG00000044646	TRUB1	100	72.521	ENSPCAG00000008427	TRUB1	100	72.805	Procavia_capensis
ENSMNEG00000044646	TRUB1	99	93.215	ENSPCOG00000024360	TRUB1	99	93.215	Propithecus_coquereli
ENSMNEG00000044646	TRUB1	75	87.500	ENSPVAG00000007575	TRUB1	100	87.500	Pteropus_vampyrus
ENSMNEG00000044646	TRUB1	71	62.302	ENSPNYG00000018614	trub1	91	61.905	Pundamilia_nyererei
ENSMNEG00000044646	TRUB1	77	56.107	ENSPNAG00000006881	trub1	88	56.107	Pygocentrus_nattereri
ENSMNEG00000044646	TRUB1	99	77.364	ENSRNOG00000017321	Trub1	99	76.218	Rattus_norvegicus
ENSMNEG00000044646	TRUB1	100	84.857	ENSRBIG00000033423	TRUB1	100	84.857	Rhinopithecus_bieti
ENSMNEG00000044646	TRUB1	100	94.571	ENSRROG00000033902	TRUB1	100	94.571	Rhinopithecus_roxellana
ENSMNEG00000044646	TRUB1	96	93.472	ENSSBOG00000024237	TRUB1	100	92.593	Saimiri_boliviensis_boliviensis
ENSMNEG00000044646	TRUB1	72	75.391	ENSSHAG00000009346	TRUB1	86	75.391	Sarcophilus_harrisii
ENSMNEG00000044646	TRUB1	69	63.786	ENSSFOG00015022124	trub1	83	64.198	Scleropages_formosus
ENSMNEG00000044646	TRUB1	69	63.821	ENSSMAG00000001020	trub1	88	63.415	Scophthalmus_maximus
ENSMNEG00000044646	TRUB1	68	63.750	ENSSDUG00000016414	trub1	88	63.415	Seriola_dumerili
ENSMNEG00000044646	TRUB1	68	64.167	ENSSLDG00000015486	trub1	88	63.821	Seriola_lalandi_dorsalis
ENSMNEG00000044646	TRUB1	84	70.034	ENSSPUG00000001642	TRUB1	96	72.143	Sphenodon_punctatus
ENSMNEG00000044646	TRUB1	74	62.308	ENSSPAG00000001217	trub1	92	61.923	Stegastes_partitus
ENSMNEG00000044646	TRUB1	99	83.954	ENSSSCG00000010653	TRUB1	99	83.954	Sus_scrofa
ENSMNEG00000044646	TRUB1	76	71.111	ENSTGUG00000010971	TRUB1	97	70.956	Taeniopygia_guttata
ENSMNEG00000044646	TRUB1	71	71.937	ENSTBEG00000002880	TRUB1	99	71.937	Tupaia_belangeri
ENSMNEG00000044646	TRUB1	71	86.056	ENSTTRG00000005767	TRUB1	100	85.985	Tursiops_truncatus
ENSMNEG00000044646	TRUB1	96	90.476	ENSUAMG00000024876	TRUB1	99	89.971	Ursus_americanus
ENSMNEG00000044646	TRUB1	84	92.542	ENSUMAG00000002411	TRUB1	99	85.960	Ursus_maritimus
ENSMNEG00000044646	TRUB1	99	89.112	ENSVPAG00000005507	TRUB1	99	89.112	Vicugna_pacos
ENSMNEG00000044646	TRUB1	99	88.539	ENSVVUG00000010085	TRUB1	83	88.252	Vulpes_vulpes
ENSMNEG00000044646	TRUB1	77	61.397	ENSXETG00000023828	trub1	98	61.397	Xenopus_tropicalis
ENSMNEG00000044646	TRUB1	69	60.494	ENSXCOG00000017847	trub1	86	60.494	Xiphophorus_couchianus
ENSMNEG00000044646	TRUB1	69	60.816	ENSXMAG00000014701	trub1	88	60.816	Xiphophorus_maculatus