EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMNEG00000045109 (Gene tree)
Gene ID: 105499941
Gene Symbol: YBX3
Alias: CSDA|CSDA1|ZONAB|dbpA
Full Name: Y-box binding protein 3
Gene Type: protein_coding
Species: Macaca_nemestrina
Status: putative
Strand: Minus strand
Length: 24798 bases
Position: chrKQ006343.1:2662959-2687756
Accession: 105499941
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMNEP00000045148	CSD	PF00313.22	6.8e-26	1	1
ENSMNEP00000045145	CSD	PF00313.22	8e-26	1	1
ENSMNEP00000045147	CSD	PF00313.22	3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMNET00000069658	YBX3-202	1107	-	ENSMNEP00000045147	368 (aa)	-	A0A2K6EAG8
ENSMNET00000069659	YBX3-203	912	XM_011772839	ENSMNEP00000045148	303 (aa)	XP_011771141	A0A2K6EAF4
ENSMNET00000069656	YBX3-201	2045	XM_011772835	ENSMNEP00000045145	372 (aa)	XP_011771137	A0A2K6EAF8

Gene Model

Click here to download ENSMNEG00000045109's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMNEG00000045109's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMNEG00000045109	YBX3	81	52.351	ENSMNEG00000044209	-	85	54.949
ENSMNEG00000045109	YBX3	85	48.649	ENSMNEG00000029948	-	94	49.481

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMNEG00000045109	YBX3	100	98.656	ENSG00000060138	YBX3	100	98.656	Homo_sapiens
ENSMNEG00000045109	YBX3	96	85.196	ENSAMEG00000009393	YBX3	95	89.118	Ailuropoda_melanoleuca
ENSMNEG00000045109	YBX3	77	64.336	ENSAPLG00000003147	YBX3	100	64.336	Anas_platyrhynchos
ENSMNEG00000045109	YBX3	100	96.505	ENSANAG00000024492	-	100	97.785	Aotus_nancymaae
ENSMNEG00000045109	YBX3	98	86.923	ENSANAG00000033366	-	93	86.923	Aotus_nancymaae
ENSMNEG00000045109	YBX3	100	81.137	ENSBTAG00000009663	YBX3	100	78.068	Bos_taurus
ENSMNEG00000045109	YBX3	100	95.699	ENSCJAG00000021660	-	100	95.699	Callithrix_jacchus
ENSMNEG00000045109	YBX3	96	71.034	ENSCJAG00000033824	-	98	90.541	Callithrix_jacchus
ENSMNEG00000045109	YBX3	77	92.014	ENSCAFG00000013401	YBX3	100	91.743	Canis_familiaris
ENSMNEG00000045109	YBX3	100	88.140	ENSCAFG00020006412	YBX3	100	87.062	Canis_lupus_dingo
ENSMNEG00000045109	YBX3	100	81.137	ENSCHIG00000010863	YBX3	100	80.376	Capra_hircus
ENSMNEG00000045109	YBX3	77	94.425	ENSTSYG00000004204	-	88	94.425	Carlito_syrichta
ENSMNEG00000045109	YBX3	100	74.587	ENSTSYG00000035821	-	97	79.464	Carlito_syrichta
ENSMNEG00000045109	YBX3	77	86.411	ENSCAPG00000015039	YBX3	93	86.411	Cavia_aperea
ENSMNEG00000045109	YBX3	79	87.372	ENSCPOG00000011329	YBX3	86	87.372	Cavia_porcellus
ENSMNEG00000045109	YBX3	100	96.237	ENSCCAG00000016469	YBX3	100	96.237	Cebus_capucinus
ENSMNEG00000045109	YBX3	100	98.928	ENSCATG00000034411	YBX3	100	98.928	Cercocebus_atys
ENSMNEG00000045109	YBX3	77	86.760	ENSCLAG00000016030	YBX3	94	86.760	Chinchilla_lanigera
ENSMNEG00000045109	YBX3	100	98.928	ENSCSAG00000008744	YBX3	100	98.928	Chlorocebus_sabaeus
ENSMNEG00000045109	YBX3	94	82.659	ENSCHOG00000011988	YBX3	57	92.593	Choloepus_hoffmanni
ENSMNEG00000045109	YBX3	78	79.381	ENSCPBG00000014147	YBX3	74	87.500	Chrysemys_picta_bellii
ENSMNEG00000045109	YBX3	56	57.558	ENSCING00000010654	yb1/2/3	73	49.767	Ciona_intestinalis
ENSMNEG00000045109	YBX3	85	98.413	ENSCANG00000036801	YBX3	100	98.413	Colobus_angolensis_palliatus
ENSMNEG00000045109	YBX3	85	89.308	ENSCGRG00001016148	Ybx3	100	83.871	Cricetulus_griseus_chok1gshd
ENSMNEG00000045109	YBX3	77	90.411	ENSCGRG00000004563	Ybx3	98	89.041	Cricetulus_griseus_crigri
ENSMNEG00000045109	YBX3	90	80.896	ENSDORG00000009103	Ybx3	81	90.244	Dipodomys_ordii
ENSMNEG00000045109	YBX3	76	84.561	ENSETEG00000002557	YBX3	99	83.803	Echinops_telfairi
ENSMNEG00000045109	YBX3	100	86.957	ENSEASG00005014726	YBX3	97	90.805	Equus_asinus_asinus
ENSMNEG00000045109	YBX3	100	89.946	ENSECAG00000013777	YBX3	100	90.217	Equus_caballus
ENSMNEG00000045109	YBX3	76	91.901	ENSEEUG00000010415	YBX3	100	91.901	Erinaceus_europaeus
ENSMNEG00000045109	YBX3	100	91.711	ENSFCAG00000027748	YBX3	100	92.787	Felis_catus
ENSMNEG00000045109	YBX3	71	94.444	ENSFALG00000003661	YBX3	71	98.837	Ficedula_albicollis
ENSMNEG00000045109	YBX3	77	85.017	ENSFDAG00000021192	YBX3	92	83.972	Fukomys_damarensis
ENSMNEG00000045109	YBX3	91	72.727	ENSGALG00000031890	YBX3	70	97.849	Gallus_gallus
ENSMNEG00000045109	YBX3	78	79.381	ENSGAGG00000017780	YBX3	74	90.385	Gopherus_agassizii
ENSMNEG00000045109	YBX3	100	98.391	ENSGGOG00000001352	YBX3	100	98.391	Gorilla_gorilla
ENSMNEG00000045109	YBX3	74	78.909	ENSHGLG00000015495	-	80	76.000	Heterocephalus_glaber_female
ENSMNEG00000045109	YBX3	80	74.917	ENSHGLG00000014798	-	86	76.094	Heterocephalus_glaber_female
ENSMNEG00000045109	YBX3	72	88.073	ENSHGLG00100003589	YBX3	87	88.073	Heterocephalus_glaber_male
ENSMNEG00000045109	YBX3	77	86.063	ENSSTOG00000002108	-	88	86.063	Ictidomys_tridecemlineatus
ENSMNEG00000045109	YBX3	93	84.393	ENSSTOG00000032577	-	100	81.183	Ictidomys_tridecemlineatus
ENSMNEG00000045109	YBX3	79	67.677	ENSJJAG00000014239	Ybx3	96	85.227	Jaculus_jaculus
ENSMNEG00000045109	YBX3	100	90.860	ENSLAFG00000017247	YBX3	100	91.129	Loxodonta_africana
ENSMNEG00000045109	YBX3	100	99.194	ENSMFAG00000039369	YBX3	100	99.194	Macaca_fascicularis
ENSMNEG00000045109	YBX3	87	99.385	ENSMMUG00000022469	YBX3	100	99.385	Macaca_mulatta
ENSMNEG00000045109	YBX3	94	84.615	ENSMLEG00000033618	YBX3	79	98.955	Mandrillus_leucophaeus
ENSMNEG00000045109	YBX3	70	98.095	ENSMGAG00000014224	YBX3	93	100.000	Meleagris_gallopavo
ENSMNEG00000045109	YBX3	88	88.344	ENSMAUG00000012185	Ybx3	98	85.981	Mesocricetus_auratus
ENSMNEG00000045109	YBX3	100	90.054	ENSMICG00000038002	-	100	91.398	Microcebus_murinus
ENSMNEG00000045109	YBX3	100	73.597	ENSMICG00000031459	-	100	68.977	Microcebus_murinus
ENSMNEG00000045109	YBX3	84	89.068	ENSMOCG00000016291	Ybx3	96	90.847	Microtus_ochrogaster
ENSMNEG00000045109	YBX3	77	82.986	ENSMODG00000018248	YBX3	91	83.681	Monodelphis_domestica
ENSMNEG00000045109	YBX3	85	88.365	MGP_CAROLIEiJ_G0028947	Ybx3	100	83.333	Mus_caroli
ENSMNEG00000045109	YBX3	85	88.365	ENSMUSG00000030189	Ybx3	100	83.333	Mus_musculus
ENSMNEG00000045109	YBX3	85	88.994	MGP_PahariEiJ_G0022709	Ybx3	100	83.871	Mus_pahari
ENSMNEG00000045109	YBX3	85	88.679	MGP_SPRETEiJ_G0029994	Ybx3	100	83.602	Mus_spretus
ENSMNEG00000045109	YBX3	100	79.003	ENSMPUG00000011810	YBX3	100	78.478	Mustela_putorius_furo
ENSMNEG00000045109	YBX3	71	92.937	ENSMLUG00000007476	YBX3	100	91.078	Myotis_lucifugus
ENSMNEG00000045109	YBX3	79	85.522	ENSNGAG00000000710	Ybx3	91	82.895	Nannospalax_galili
ENSMNEG00000045109	YBX3	95	93.239	ENSNLEG00000034844	YBX3	100	93.239	Nomascus_leucogenys
ENSMNEG00000045109	YBX3	52	68.599	ENSMEUG00000002507	-	81	76.879	Notamacropus_eugenii
ENSMNEG00000045109	YBX3	82	80.592	ENSODEG00000017957	YBX3	94	80.997	Octodon_degus
ENSMNEG00000045109	YBX3	79	87.119	ENSOCUG00000001889	YBX3	85	86.780	Oryctolagus_cuniculus
ENSMNEG00000045109	YBX3	100	89.182	ENSOGAG00000013245	YBX3	100	88.918	Otolemur_garnettii
ENSMNEG00000045109	YBX3	69	98.980	ENSOARG00000020919	YBX3	99	82.155	Ovis_aries
ENSMNEG00000045109	YBX3	100	91.667	ENSPPAG00000039068	YBX3	100	91.667	Pan_paniscus
ENSMNEG00000045109	YBX3	100	91.444	ENSPPRG00000005859	YBX3	100	92.513	Panthera_pardus
ENSMNEG00000045109	YBX3	77	92.632	ENSPTIG00000005322	YBX3	81	91.986	Panthera_tigris_altaica
ENSMNEG00000045109	YBX3	100	98.128	ENSPTRG00000004681	YBX3	100	98.128	Pan_troglodytes
ENSMNEG00000045109	YBX3	100	99.194	ENSPANG00000010280	YBX3	100	99.194	Papio_anubis
ENSMNEG00000045109	YBX3	57	99.038	ENSPSIG00000009247	YBX3	90	100.000	Pelodiscus_sinensis
ENSMNEG00000045109	YBX3	82	87.903	ENSPEMG00000010391	-	85	90.708	Peromyscus_maniculatus_bairdii
ENSMNEG00000045109	YBX3	87	88.272	ENSPEMG00000012132	-	99	86.916	Peromyscus_maniculatus_bairdii
ENSMNEG00000045109	YBX3	70	81.154	ENSPCIG00000029949	YBX3	100	79.231	Phascolarctos_cinereus
ENSMNEG00000045109	YBX3	100	98.118	ENSPPYG00000004279	YBX3	100	98.118	Pongo_abelii
ENSMNEG00000045109	YBX3	80	100.000	ENSPCAG00000001397	YBX3	95	100.000	Procavia_capensis
ENSMNEG00000045109	YBX3	50	70.732	ENSPCOG00000011663	YBX3	100	86.719	Propithecus_coquereli
ENSMNEG00000045109	YBX3	100	78.400	ENSPVAG00000006740	YBX3	77	91.034	Pteropus_vampyrus
ENSMNEG00000045109	YBX3	85	89.623	ENSRNOG00000005480	Ybx3	100	84.140	Rattus_norvegicus
ENSMNEG00000045109	YBX3	100	97.849	ENSRBIG00000039208	YBX3	100	97.849	Rhinopithecus_bieti
ENSMNEG00000045109	YBX3	100	98.118	ENSRROG00000029638	YBX3	100	98.118	Rhinopithecus_roxellana
ENSMNEG00000045109	YBX3	92	87.172	ENSSBOG00000030573	YBX3	87	95.254	Saimiri_boliviensis_boliviensis
ENSMNEG00000045109	YBX3	65	98.837	ENSSHAG00000003262	YBX3	98	80.412	Sarcophilus_harrisii
ENSMNEG00000045109	YBX3	100	87.402	ENSSSCG00000000633	YBX3	100	89.239	Sus_scrofa
ENSMNEG00000045109	YBX3	70	98.077	ENSTGUG00000012047	YBX3	74	98.077	Taeniopygia_guttata
ENSMNEG00000045109	YBX3	100	86.290	ENSTBEG00000012570	YBX3	81	94.198	Tupaia_belangeri
ENSMNEG00000045109	YBX3	71	84.211	ENSTTRG00000008045	YBX3	100	84.211	Tursiops_truncatus
ENSMNEG00000045109	YBX3	75	87.770	ENSUAMG00000016662	YBX3	100	88.727	Ursus_americanus
ENSMNEG00000045109	YBX3	77	91.228	ENSUMAG00000016118	YBX3	94	91.289	Ursus_maritimus
ENSMNEG00000045109	YBX3	57	100.000	ENSVPAG00000000876	YBX3	100	72.183	Vicugna_pacos
ENSMNEG00000045109	YBX3	74	90.511	ENSVVUG00000004956	YBX3	100	90.876	Vulpes_vulpes
ENSMNEG00000045109	YBX3	53	92.222	ENSXETG00000016239	ybx3	90	64.602	Xenopus_tropicalis