EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMNEG00000045196 (Gene tree)
Gene ID: 105464430
Gene Symbol: APOBEC3C
Alias: APOBEC1L|ARDC2|ARDC4|ARP5|PBI|bK150C2.3
Full Name: DNA dC->dU-editing enzyme APOBEC-3C
Gene Type: protein_coding
Species: Macaca_nemestrina
Status: putative
Strand: Minus strand
Length: 6071 bases
Position: chrKQ006630.1:9423623-9429693
Accession: 105464430
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMNEP00000045340	APOBEC_N	PF08210.11	9.1e-57	1	1
ENSMNEP00000045340	APOBEC_C	PF05240.14	9.2e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMNET00000069851	APOBEC3C-201	2819	XM_011712332	ENSMNEP00000045340	190 (aa)	XP_011710634	A0A2K6EAZ7

Gene Model

Click here to download ENSMNEG00000045196's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMNEG00000045196's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMNEG00000045196	APOBEC3C	100	48.947	ENSMNEG00000043211	-	94	48.947
ENSMNEG00000045196	APOBEC3C	97	41.622	ENSMNEG00000038847	APOBEC3G	94	41.270
ENSMNEG00000045196	APOBEC3C	96	35.789	ENSMNEG00000039259	APOBEC3H	91	34.694
ENSMNEG00000045196	APOBEC3C	100	74.731	ENSMNEG00000043316	APOBEC3D	100	74.731
ENSMNEG00000045196	APOBEC3C	93	34.254	ENSMNEG00000045497	APOBEC2	79	34.254
ENSMNEG00000045196	APOBEC3C	94	40.782	ENSMNEG00000043421	AICDA	94	39.716

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMNEG00000045196	APOBEC3C	100	73.684	ENSG00000243811	APOBEC3D	100	73.684	Homo_sapiens
ENSMNEG00000045196	APOBEC3C	100	72.581	ENSG00000128394	APOBEC3F	100	72.581	Homo_sapiens
ENSMNEG00000045196	APOBEC3C	100	84.211	ENSG00000244509	APOBEC3C	100	84.211	Homo_sapiens
ENSMNEG00000045196	APOBEC3C	100	66.316	ENSANAG00000030088	-	97	65.591	Aotus_nancymaae
ENSMNEG00000045196	APOBEC3C	69	65.909	ENSCJAG00000015317	-	100	65.909	Callithrix_jacchus
ENSMNEG00000045196	APOBEC3C	98	45.263	ENSCAFG00020002615	-	99	45.263	Canis_lupus_dingo
ENSMNEG00000045196	APOBEC3C	96	49.180	ENSTSYG00000030036	-	99	49.180	Carlito_syrichta
ENSMNEG00000045196	APOBEC3C	99	50.811	ENSTSYG00000034260	-	99	50.811	Carlito_syrichta
ENSMNEG00000045196	APOBEC3C	96	52.459	ENSTSYG00000028254	-	99	52.459	Carlito_syrichta
ENSMNEG00000045196	APOBEC3C	98	63.978	ENSCCAG00000030932	-	84	63.978	Cebus_capucinus
ENSMNEG00000045196	APOBEC3C	100	91.579	ENSCATG00000043226	APOBEC3C	100	91.579	Cercocebus_atys
ENSMNEG00000045196	APOBEC3C	99	76.882	ENSCATG00000033502	-	100	76.882	Cercocebus_atys
ENSMNEG00000045196	APOBEC3C	100	90.526	ENSCSAG00000006402	APOBEC3C	100	90.526	Chlorocebus_sabaeus
ENSMNEG00000045196	APOBEC3C	100	74.194	ENSCSAG00000006382	APOBEC3F	100	74.194	Chlorocebus_sabaeus
ENSMNEG00000045196	APOBEC3C	100	73.656	ENSCANG00000031957	-	100	73.656	Colobus_angolensis_palliatus
ENSMNEG00000045196	APOBEC3C	100	74.194	ENSCANG00000032904	-	100	74.194	Colobus_angolensis_palliatus
ENSMNEG00000045196	APOBEC3C	100	67.742	ENSCANG00000033269	-	99	70.109	Colobus_angolensis_palliatus
ENSMNEG00000045196	APOBEC3C	100	87.368	ENSCANG00000039177	APOBEC3C	100	87.368	Colobus_angolensis_palliatus
ENSMNEG00000045196	APOBEC3C	97	39.785	ENSDNOG00000044642	-	99	39.785	Dasypus_novemcinctus
ENSMNEG00000045196	APOBEC3C	100	42.647	ENSEASG00005018641	-	100	42.647	Equus_asinus_asinus
ENSMNEG00000045196	APOBEC3C	98	47.973	ENSECAG00000006071	-	100	46.154	Equus_caballus
ENSMNEG00000045196	APOBEC3C	100	78.421	ENSGGOG00000036587	-	100	78.421	Gorilla_gorilla
ENSMNEG00000045196	APOBEC3C	100	73.656	ENSGGOG00000038678	APOBEC3F	100	73.656	Gorilla_gorilla
ENSMNEG00000045196	APOBEC3C	98	44.385	ENSHGLG00000017315	-	85	43.784	Heterocephalus_glaber_female
ENSMNEG00000045196	APOBEC3C	98	44.624	ENSHGLG00100003105	-	93	44.624	Heterocephalus_glaber_male
ENSMNEG00000045196	APOBEC3C	100	74.194	ENSMFAG00000004037	APOBEC3F	100	74.194	Macaca_fascicularis
ENSMNEG00000045196	APOBEC3C	100	94.211	ENSMFAG00000016792	APOBEC3C	100	94.211	Macaca_fascicularis
ENSMNEG00000045196	APOBEC3C	100	74.731	ENSMFAG00000002331	-	100	74.731	Macaca_fascicularis
ENSMNEG00000045196	APOBEC3C	100	73.656	ENSMMUG00000004017	APOBEC3F	99	74.731	Macaca_mulatta
ENSMNEG00000045196	APOBEC3C	97	97.283	ENSMMUG00000004018	APOBEC3C	95	97.283	Macaca_mulatta
ENSMNEG00000045196	APOBEC3C	100	91.579	ENSMLEG00000036992	APOBEC3C	100	91.579	Mandrillus_leucophaeus
ENSMNEG00000045196	APOBEC3C	100	73.656	ENSMLEG00000029642	APOBEC3F	100	73.656	Mandrillus_leucophaeus
ENSMNEG00000045196	APOBEC3C	99	55.319	ENSMICG00000042615	-	89	55.319	Microcebus_murinus
ENSMNEG00000045196	APOBEC3C	97	45.550	ENSMLUG00000023676	-	99	45.550	Myotis_lucifugus
ENSMNEG00000045196	APOBEC3C	100	77.368	ENSNLEG00000028392	APOBEC3C	100	77.368	Nomascus_leucogenys
ENSMNEG00000045196	APOBEC3C	100	59.474	ENSNLEG00000035811	-	100	59.474	Nomascus_leucogenys
ENSMNEG00000045196	APOBEC3C	98	44.385	ENSOGAG00000030300	-	97	44.385	Otolemur_garnettii
ENSMNEG00000045196	APOBEC3C	98	45.989	ENSOGAG00000032498	-	99	45.989	Otolemur_garnettii
ENSMNEG00000045196	APOBEC3C	98	46.286	ENSOGAG00000033404	-	99	46.286	Otolemur_garnettii
ENSMNEG00000045196	APOBEC3C	100	84.211	ENSPPAG00000014118	APOBEC3C	100	84.211	Pan_paniscus
ENSMNEG00000045196	APOBEC3C	100	72.632	ENSPPAG00000028218	-	100	72.632	Pan_paniscus
ENSMNEG00000045196	APOBEC3C	97	48.108	ENSPPRG00000003726	-	98	48.108	Panthera_pardus
ENSMNEG00000045196	APOBEC3C	100	72.043	ENSPTRG00000014385	APOBEC3C	100	72.043	Pan_troglodytes
ENSMNEG00000045196	APOBEC3C	100	72.632	ENSPTRG00000041588	APOBEC3D	100	72.632	Pan_troglodytes
ENSMNEG00000045196	APOBEC3C	100	92.105	ENSPANG00000010775	APOBEC3F	100	92.105	Papio_anubis
ENSMNEG00000045196	APOBEC3C	100	78.947	ENSPPYG00000011832	APOBEC3C	100	78.947	Pongo_abelii
ENSMNEG00000045196	APOBEC3C	66	55.556	ENSPCOG00000018072	-	95	55.556	Propithecus_coquereli
ENSMNEG00000045196	APOBEC3C	67	54.688	ENSPCOG00000022067	-	97	54.688	Propithecus_coquereli
ENSMNEG00000045196	APOBEC3C	92	47.154	ENSPVAG00000009461	-	50	47.154	Pteropus_vampyrus
ENSMNEG00000045196	APOBEC3C	100	72.222	ENSRBIG00000042297	-	99	74.522	Rhinopithecus_bieti
ENSMNEG00000045196	APOBEC3C	100	83.684	ENSRBIG00000030323	-	100	83.684	Rhinopithecus_bieti
ENSMNEG00000045196	APOBEC3C	100	74.194	ENSRBIG00000030834	-	100	74.194	Rhinopithecus_bieti
ENSMNEG00000045196	APOBEC3C	100	83.684	ENSRROG00000029045	APOBEC3C	100	83.684	Rhinopithecus_roxellana
ENSMNEG00000045196	APOBEC3C	100	71.667	ENSRROG00000029996	-	100	71.667	Rhinopithecus_roxellana
ENSMNEG00000045196	APOBEC3C	100	73.656	ENSRROG00000028557	-	100	73.656	Rhinopithecus_roxellana
ENSMNEG00000045196	APOBEC3C	100	66.316	ENSSBOG00000032780	-	100	66.316	Saimiri_boliviensis_boliviensis
ENSMNEG00000045196	APOBEC3C	85	47.826	ENSUAMG00000004433	-	89	47.826	Ursus_americanus
ENSMNEG00000045196	APOBEC3C	87	48.795	ENSUMAG00000014441	-	77	48.795	Ursus_maritimus
ENSMNEG00000045196	APOBEC3C	77	48.344	ENSVVUG00000014628	-	91	47.973	Vulpes_vulpes