EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000000152 (Gene tree)
Gene ID: 101981714
Gene Symbol: Tnrc6a
Alias: 2010321I05Rik|3110054G10Rik|CAGH26|D130023A07Rik|Tnrc6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 80073 bases
Position: chrJH996541.1:888494-968566
Accession: 101981714
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000000166	Ago_hook	PF10427.9	6.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000000191	-	5694	XM_005371516	ENSMOCP00000000166	1897 (aa)	XP_005371573	UPI00038C2B93

Gene Model

Click here to download ENSMOCG00000000152's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000000152's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000000152	Tnrc6a	98	39.625	ENSMOCG00000015879	Tnrc6c	99	41.180
ENSMOCG00000000152	Tnrc6a	94	52.604	ENSMOCG00000020334	Tnrc6b	98	54.922

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000000152	Tnrc6a	100	94.668	ENSG00000090905	TNRC6A	100	94.929	Homo_sapiens
ENSMOCG00000000152	Tnrc6a	98	91.636	ENSAMEG00000009333	TNRC6A	99	91.789	Ailuropoda_melanoleuca
ENSMOCG00000000152	Tnrc6a	97	78.740	ENSAPLG00000009978	TNRC6A	100	78.845	Anas_platyrhynchos
ENSMOCG00000000152	Tnrc6a	100	53.603	ENSACAG00000011857	TNRC6A	100	55.447	Anolis_carolinensis
ENSMOCG00000000152	Tnrc6a	100	94.864	ENSANAG00000025252	TNRC6A	100	95.126	Aotus_nancymaae
ENSMOCG00000000152	Tnrc6a	91	57.087	ENSAMXG00000019919	tnrc6a	99	57.509	Astyanax_mexicanus
ENSMOCG00000000152	Tnrc6a	100	93.330	ENSBTAG00000017999	TNRC6A	100	93.225	Bos_taurus
ENSMOCG00000000152	Tnrc6a	100	92.062	ENSCJAG00000020677	TNRC6A	100	93.402	Callithrix_jacchus
ENSMOCG00000000152	Tnrc6a	97	93.824	ENSCAFG00000017531	TNRC6A	99	94.039	Canis_familiaris
ENSMOCG00000000152	Tnrc6a	98	91.912	ENSCAFG00020021160	TNRC6A	99	92.962	Canis_lupus_dingo
ENSMOCG00000000152	Tnrc6a	100	93.225	ENSCHIG00000019448	TNRC6A	100	93.477	Capra_hircus
ENSMOCG00000000152	Tnrc6a	100	94.290	ENSTSYG00000012711	TNRC6A	100	94.552	Carlito_syrichta
ENSMOCG00000000152	Tnrc6a	99	94.834	ENSCPOG00000036684	TNRC6A	100	95.045	Cavia_porcellus
ENSMOCG00000000152	Tnrc6a	100	94.764	ENSCCAG00000033664	TNRC6A	100	94.974	Cebus_capucinus
ENSMOCG00000000152	Tnrc6a	99	94.272	ENSCATG00000019284	TNRC6A	99	94.587	Cercocebus_atys
ENSMOCG00000000152	Tnrc6a	100	89.680	ENSCLAG00000010217	TNRC6A	100	90.152	Chinchilla_lanigera
ENSMOCG00000000152	Tnrc6a	100	92.449	ENSCSAG00000006561	TNRC6A	100	92.653	Chlorocebus_sabaeus
ENSMOCG00000000152	Tnrc6a	95	87.270	ENSCHOG00000009374	TNRC6A	95	87.474	Choloepus_hoffmanni
ENSMOCG00000000152	Tnrc6a	91	81.002	ENSCPBG00000001881	TNRC6A	99	81.059	Chrysemys_picta_bellii
ENSMOCG00000000152	Tnrc6a	100	94.814	ENSCANG00000041549	TNRC6A	100	95.076	Colobus_angolensis_palliatus
ENSMOCG00000000152	Tnrc6a	100	98.056	ENSCGRG00001015021	Tnrc6a	100	98.056	Cricetulus_griseus_chok1gshd
ENSMOCG00000000152	Tnrc6a	99	97.057	ENSCGRG00000013351	Tnrc6a	99	97.057	Cricetulus_griseus_crigri
ENSMOCG00000000152	Tnrc6a	91	57.247	ENSDARG00000079688	tnrc6a	99	57.447	Danio_rerio
ENSMOCG00000000152	Tnrc6a	97	90.126	ENSDNOG00000013989	TNRC6A	99	90.074	Dasypus_novemcinctus
ENSMOCG00000000152	Tnrc6a	97	83.403	ENSETEG00000014658	TNRC6A	99	83.456	Echinops_telfairi
ENSMOCG00000000152	Tnrc6a	100	94.377	ENSEASG00005017693	TNRC6A	100	94.693	Equus_asinus_asinus
ENSMOCG00000000152	Tnrc6a	100	92.008	ENSECAG00000025056	TNRC6A	99	94.555	Equus_caballus
ENSMOCG00000000152	Tnrc6a	97	84.961	ENSEEUG00000004530	TNRC6A	99	85.013	Erinaceus_europaeus
ENSMOCG00000000152	Tnrc6a	100	93.284	ENSFCAG00000025236	TNRC6A	100	93.442	Felis_catus
ENSMOCG00000000152	Tnrc6a	99	75.785	ENSFALG00000003757	TNRC6A	99	77.091	Ficedula_albicollis
ENSMOCG00000000152	Tnrc6a	91	80.920	ENSGALG00000006068	TNRC6A	99	81.552	Gallus_gallus
ENSMOCG00000000152	Tnrc6a	91	80.275	ENSGAGG00000023209	TNRC6A	99	80.619	Gopherus_agassizii
ENSMOCG00000000152	Tnrc6a	99	94.673	ENSGGOG00000005137	TNRC6A	99	94.884	Gorilla_gorilla
ENSMOCG00000000152	Tnrc6a	99	92.470	ENSHGLG00000012474	-	100	92.417	Heterocephalus_glaber_female
ENSMOCG00000000152	Tnrc6a	94	73.531	ENSHGLG00000007368	-	93	73.475	Heterocephalus_glaber_female
ENSMOCG00000000152	Tnrc6a	99	92.287	ENSHGLG00100012496	-	100	92.340	Heterocephalus_glaber_male
ENSMOCG00000000152	Tnrc6a	99	91.242	ENSSTOG00000023394	TNRC6A	99	91.191	Ictidomys_tridecemlineatus
ENSMOCG00000000152	Tnrc6a	97	67.983	ENSLACG00000006277	TNRC6A	100	68.139	Latimeria_chalumnae
ENSMOCG00000000152	Tnrc6a	99	82.781	ENSLOCG00000005517	tnrc6a	93	82.781	Lepisosteus_oculatus
ENSMOCG00000000152	Tnrc6a	98	93.470	ENSLAFG00000004209	TNRC6A	99	93.521	Loxodonta_africana
ENSMOCG00000000152	Tnrc6a	100	94.709	ENSMMUG00000020428	TNRC6A	100	94.971	Macaca_mulatta
ENSMOCG00000000152	Tnrc6a	100	94.633	ENSMNEG00000034854	TNRC6A	100	94.633	Macaca_nemestrina
ENSMOCG00000000152	Tnrc6a	97	90.933	ENSMLEG00000042737	TNRC6A	97	91.141	Mandrillus_leucophaeus
ENSMOCG00000000152	Tnrc6a	99	76.429	ENSMGAG00000006455	TNRC6A	99	76.884	Meleagris_gallopavo
ENSMOCG00000000152	Tnrc6a	100	98.210	ENSMAUG00000012750	Tnrc6a	100	98.210	Mesocricetus_auratus
ENSMOCG00000000152	Tnrc6a	100	95.034	ENSMICG00000030685	TNRC6A	100	95.191	Microcebus_murinus
ENSMOCG00000000152	Tnrc6a	99	78.372	ENSMODG00000016348	TNRC6A	99	79.321	Monodelphis_domestica
ENSMOCG00000000152	Tnrc6a	99	96.330	MGP_CAROLIEiJ_G0030425	Tnrc6a	99	96.330	Mus_caroli
ENSMOCG00000000152	Tnrc6a	100	96.943	ENSMUSG00000052707	Tnrc6a	100	96.943	Mus_musculus
ENSMOCG00000000152	Tnrc6a	99	97.076	MGP_PahariEiJ_G0013635	Tnrc6a	99	97.076	Mus_pahari
ENSMOCG00000000152	Tnrc6a	100	94.347	MGP_SPRETEiJ_G0031539	Tnrc6a	100	94.245	Mus_spretus
ENSMOCG00000000152	Tnrc6a	97	83.568	ENSMPUG00000012324	TNRC6A	100	83.297	Mustela_putorius_furo
ENSMOCG00000000152	Tnrc6a	97	89.293	ENSMLUG00000002701	TNRC6A	100	89.504	Myotis_lucifugus
ENSMOCG00000000152	Tnrc6a	99	95.529	ENSNGAG00000020702	Tnrc6a	100	95.686	Nannospalax_galili
ENSMOCG00000000152	Tnrc6a	97	92.880	ENSNLEG00000011851	TNRC6A	98	93.096	Nomascus_leucogenys
ENSMOCG00000000152	Tnrc6a	77	83.942	ENSMEUG00000015959	-	77	83.942	Notamacropus_eugenii
ENSMOCG00000000152	Tnrc6a	95	99.254	ENSOPRG00000005819	TNRC6A	96	99.254	Ochotona_princeps
ENSMOCG00000000152	Tnrc6a	99	89.048	ENSODEG00000012802	TNRC6A	99	88.617	Octodon_degus
ENSMOCG00000000152	Tnrc6a	87	79.490	ENSOANG00000007672	TNRC6A	99	79.638	Ornithorhynchus_anatinus
ENSMOCG00000000152	Tnrc6a	97	89.499	ENSOCUG00000004325	TNRC6A	100	89.340	Oryctolagus_cuniculus
ENSMOCG00000000152	Tnrc6a	99	92.308	ENSOGAG00000006666	TNRC6A	100	92.617	Otolemur_garnettii
ENSMOCG00000000152	Tnrc6a	99	90.015	ENSOARG00000017950	TNRC6A	98	93.826	Ovis_aries
ENSMOCG00000000152	Tnrc6a	99	94.415	ENSPPAG00000028379	TNRC6A	100	94.676	Pan_paniscus
ENSMOCG00000000152	Tnrc6a	100	93.284	ENSPPRG00000005861	TNRC6A	100	93.442	Panthera_pardus
ENSMOCG00000000152	Tnrc6a	99	92.103	ENSPTIG00000006346	TNRC6A	99	92.312	Panthera_tigris_altaica
ENSMOCG00000000152	Tnrc6a	99	90.281	ENSPTRG00000007898	TNRC6A	99	91.771	Pan_troglodytes
ENSMOCG00000000152	Tnrc6a	100	92.276	ENSPANG00000018523	TNRC6A	100	92.484	Papio_anubis
ENSMOCG00000000152	Tnrc6a	88	75.369	ENSPKIG00000012859	tnrc6a	99	75.369	Paramormyrops_kingsleyae
ENSMOCG00000000152	Tnrc6a	77	77.470	ENSPSIG00000003965	TNRC6A	99	77.537	Pelodiscus_sinensis
ENSMOCG00000000152	Tnrc6a	100	97.525	ENSPEMG00000016318	Tnrc6a	100	97.944	Peromyscus_maniculatus_bairdii
ENSMOCG00000000152	Tnrc6a	97	82.325	ENSPCIG00000012106	TNRC6A	100	82.592	Phascolarctos_cinereus
ENSMOCG00000000152	Tnrc6a	99	91.641	ENSPPYG00000007202	TNRC6A	100	91.794	Pongo_abelii
ENSMOCG00000000152	Tnrc6a	95	100.000	ENSPCAG00000008260	TNRC6A	94	100.000	Procavia_capensis
ENSMOCG00000000152	Tnrc6a	100	92.730	ENSPCOG00000010134	TNRC6A	100	92.887	Propithecus_coquereli
ENSMOCG00000000152	Tnrc6a	89	69.009	ENSPVAG00000012066	TNRC6A	99	69.470	Pteropus_vampyrus
ENSMOCG00000000152	Tnrc6a	100	96.240	ENSRNOG00000024737	Tnrc6a	100	96.240	Rattus_norvegicus
ENSMOCG00000000152	Tnrc6a	97	94.627	ENSRBIG00000014222	TNRC6A	99	94.895	Rhinopithecus_bieti
ENSMOCG00000000152	Tnrc6a	100	92.631	ENSRROG00000032360	TNRC6A	100	92.835	Rhinopithecus_roxellana
ENSMOCG00000000152	Tnrc6a	98	92.004	ENSSBOG00000036197	TNRC6A	99	93.400	Saimiri_boliviensis_boliviensis
ENSMOCG00000000152	Tnrc6a	91	82.955	ENSSHAG00000008811	TNRC6A	99	83.409	Sarcophilus_harrisii
ENSMOCG00000000152	Tnrc6a	91	58.918	ENSSFOG00015008920	tnrc6a	99	58.703	Scleropages_formosus
ENSMOCG00000000152	Tnrc6a	71	75.679	ENSSARG00000002479	TNRC6A	89	76.269	Sorex_araneus
ENSMOCG00000000152	Tnrc6a	90	77.752	ENSSPUG00000010525	TNRC6A	100	77.925	Sphenodon_punctatus
ENSMOCG00000000152	Tnrc6a	100	93.633	ENSSSCG00000038870	TNRC6A	99	95.995	Sus_scrofa
ENSMOCG00000000152	Tnrc6a	99	78.878	ENSTGUG00000006142	TNRC6A	100	79.717	Taeniopygia_guttata
ENSMOCG00000000152	Tnrc6a	98	89.603	ENSTBEG00000014965	TNRC6A	99	89.807	Tupaia_belangeri
ENSMOCG00000000152	Tnrc6a	93	91.370	ENSTTRG00000002008	TNRC6A	93	91.370	Tursiops_truncatus
ENSMOCG00000000152	Tnrc6a	79	93.909	ENSUAMG00000006656	-	93	94.244	Ursus_americanus
ENSMOCG00000000152	Tnrc6a	99	90.938	ENSUMAG00000008274	TNRC6A	99	96.056	Ursus_maritimus
ENSMOCG00000000152	Tnrc6a	55	85.714	ENSVPAG00000010764	-	57	84.694	Vicugna_pacos
ENSMOCG00000000152	Tnrc6a	99	93.714	ENSVVUG00000005380	TNRC6A	99	93.925	Vulpes_vulpes
ENSMOCG00000000152	Tnrc6a	94	64.267	ENSXETG00000030437	TNRC6A	99	64.166	Xenopus_tropicalis