EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000000174 (Gene tree)
Gene ID: 101997516
Gene Symbol: Gpatch1
Alias: 1300003A17Rik|Gpatc1
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 40966 bases
Position: chrJH996462.1:3003529-3044494
Accession: 101997516
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000000198	DUF1604	PF07713.13	7.7e-36	1	1
ENSMOCP00000000198	G-patch	PF01585.23	9.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000000223	-	2787	XM_005368420	ENSMOCP00000000198	928 (aa)	XP_005368477	-

Gene Model

Click here to download ENSMOCG00000000174's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000000174's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000000174	Gpatch1	92	82.497	ENSG00000076650	GPATCH1	99	81.418	Homo_sapiens
ENSMOCG00000000174	Gpatch1	92	82.924	ENSAMEG00000015575	GPATCH1	99	82.131	Ailuropoda_melanoleuca
ENSMOCG00000000174	Gpatch1	82	70.166	ENSAOCG00000006668	gpatch1	75	70.166	Amphiprion_ocellaris
ENSMOCG00000000174	Gpatch1	82	54.922	ENSAPEG00000000026	gpatch1	91	51.025	Amphiprion_percula
ENSMOCG00000000174	Gpatch1	82	52.993	ENSATEG00000014494	gpatch1	90	51.631	Anabas_testudineus
ENSMOCG00000000174	Gpatch1	91	59.800	ENSAPLG00000007584	GPATCH1	96	60.875	Anas_platyrhynchos
ENSMOCG00000000174	Gpatch1	92	82.847	ENSANAG00000027002	GPATCH1	99	81.633	Aotus_nancymaae
ENSMOCG00000000174	Gpatch1	82	53.149	ENSACLG00000024740	gpatch1	79	53.275	Astatotilapia_calliptera
ENSMOCG00000000174	Gpatch1	92	52.207	ENSAMXG00000020177	gpatch1	97	53.050	Astyanax_mexicanus
ENSMOCG00000000174	Gpatch1	92	81.616	ENSBTAG00000000721	GPATCH1	99	80.301	Bos_taurus
ENSMOCG00000000174	Gpatch1	68	31.476	WBGene00011109	R07E5.1	68	31.476	Caenorhabditis_elegans
ENSMOCG00000000174	Gpatch1	92	82.827	ENSCJAG00000000684	GPATCH1	99	81.525	Callithrix_jacchus
ENSMOCG00000000174	Gpatch1	92	82.360	ENSCAFG00000007457	GPATCH1	83	81.505	Canis_familiaris
ENSMOCG00000000174	Gpatch1	95	82.366	ENSCAFG00020019731	GPATCH1	91	82.360	Canis_lupus_dingo
ENSMOCG00000000174	Gpatch1	92	82.553	ENSCHIG00000019626	GPATCH1	99	81.055	Capra_hircus
ENSMOCG00000000174	Gpatch1	89	78.890	ENSCAPG00000008827	GPATCH1	99	78.295	Cavia_aperea
ENSMOCG00000000174	Gpatch1	92	81.119	ENSCPOG00000024477	GPATCH1	99	80.579	Cavia_porcellus
ENSMOCG00000000174	Gpatch1	92	82.477	ENSCCAG00000024676	GPATCH1	99	81.203	Cebus_capucinus
ENSMOCG00000000174	Gpatch1	92	82.964	ENSCATG00000043637	GPATCH1	99	81.740	Cercocebus_atys
ENSMOCG00000000174	Gpatch1	97	79.065	ENSCLAG00000003395	-	100	79.399	Chinchilla_lanigera
ENSMOCG00000000174	Gpatch1	92	80.769	ENSCSAG00000004743	GPATCH1	99	79.721	Chlorocebus_sabaeus
ENSMOCG00000000174	Gpatch1	83	74.098	ENSCHOG00000012865	GPATCH1	89	74.098	Choloepus_hoffmanni
ENSMOCG00000000174	Gpatch1	79	67.707	ENSCPBG00000000666	GPATCH1	92	67.707	Chrysemys_picta_bellii
ENSMOCG00000000174	Gpatch1	76	35.534	ENSCING00000012518	-	84	34.545	Ciona_intestinalis
ENSMOCG00000000174	Gpatch1	90	78.719	ENSCANG00000012540	GPATCH1	99	78.719	Colobus_angolensis_palliatus
ENSMOCG00000000174	Gpatch1	97	89.404	ENSCGRG00001016736	Gpatch1	99	88.742	Cricetulus_griseus_chok1gshd
ENSMOCG00000000174	Gpatch1	89	74.824	ENSCGRG00000005069	Gpatch1	91	74.272	Cricetulus_griseus_crigri
ENSMOCG00000000174	Gpatch1	81	50.552	ENSCSEG00000019456	-	84	63.303	Cynoglossus_semilaevis
ENSMOCG00000000174	Gpatch1	91	50.386	ENSDARG00000033418	gpatch1	92	50.710	Danio_rerio
ENSMOCG00000000174	Gpatch1	92	80.958	ENSDNOG00000005291	GPATCH1	95	80.491	Dasypus_novemcinctus
ENSMOCG00000000174	Gpatch1	95	77.062	ENSDORG00000012546	Gpatch1	95	78.037	Dipodomys_ordii
ENSMOCG00000000174	Gpatch1	70	34.488	FBgn0036386	CG8833	67	35.581	Drosophila_melanogaster
ENSMOCG00000000174	Gpatch1	99	73.089	ENSETEG00000003626	GPATCH1	92	73.598	Echinops_telfairi
ENSMOCG00000000174	Gpatch1	95	37.093	ENSEBUG00000011286	gpatch1	91	38.364	Eptatretus_burgeri
ENSMOCG00000000174	Gpatch1	91	82.471	ENSEASG00005021162	GPATCH1	93	83.706	Equus_asinus_asinus
ENSMOCG00000000174	Gpatch1	95	83.030	ENSECAG00000022743	GPATCH1	88	82.924	Equus_caballus
ENSMOCG00000000174	Gpatch1	78	79.902	ENSEEUG00000012925	GPATCH1	78	79.902	Erinaceus_europaeus
ENSMOCG00000000174	Gpatch1	91	49.889	ENSELUG00000018195	gpatch1	90	50.332	Esox_lucius
ENSMOCG00000000174	Gpatch1	100	81.378	ENSFCAG00000014917	GPATCH1	99	81.378	Felis_catus
ENSMOCG00000000174	Gpatch1	93	62.108	ENSFALG00000007821	GPATCH1	90	61.538	Ficedula_albicollis
ENSMOCG00000000174	Gpatch1	97	78.959	ENSFDAG00000003871	GPATCH1	100	78.627	Fukomys_damarensis
ENSMOCG00000000174	Gpatch1	84	52.436	ENSGMOG00000003830	gpatch1	95	52.436	Gadus_morhua
ENSMOCG00000000174	Gpatch1	93	62.584	ENSGALG00000004839	GPATCH1	94	62.702	Gallus_gallus
ENSMOCG00000000174	Gpatch1	82	52.332	ENSGACG00000017544	gpatch1	94	49.309	Gasterosteus_aculeatus
ENSMOCG00000000174	Gpatch1	92	64.111	ENSGAGG00000010067	GPATCH1	91	63.182	Gopherus_agassizii
ENSMOCG00000000174	Gpatch1	90	81.570	ENSGGOG00000010862	GPATCH1	99	81.126	Gorilla_gorilla
ENSMOCG00000000174	Gpatch1	82	53.729	ENSHBUG00000023462	gpatch1	90	50.958	Haplochromis_burtoni
ENSMOCG00000000174	Gpatch1	92	80.630	ENSHGLG00000009334	GPATCH1	99	79.914	Heterocephalus_glaber_female
ENSMOCG00000000174	Gpatch1	92	80.747	ENSHGLG00100018074	GPATCH1	99	80.021	Heterocephalus_glaber_male
ENSMOCG00000000174	Gpatch1	94	52.350	ENSIPUG00000014977	gpatch1	90	51.798	Ictalurus_punctatus
ENSMOCG00000000174	Gpatch1	92	82.243	ENSSTOG00000003720	GPATCH1	99	81.828	Ictidomys_tridecemlineatus
ENSMOCG00000000174	Gpatch1	92	85.229	ENSJJAG00000023765	Gpatch1	99	83.621	Jaculus_jaculus
ENSMOCG00000000174	Gpatch1	90	51.792	ENSKMAG00000017950	gpatch1	89	52.254	Kryptolebias_marmoratus
ENSMOCG00000000174	Gpatch1	82	52.304	ENSLBEG00000026527	gpatch1	79	53.425	Labrus_bergylta
ENSMOCG00000000174	Gpatch1	89	57.313	ENSLACG00000008130	GPATCH1	90	57.725	Latimeria_chalumnae
ENSMOCG00000000174	Gpatch1	82	57.272	ENSLOCG00000001800	gpatch1	90	54.861	Lepisosteus_oculatus
ENSMOCG00000000174	Gpatch1	92	81.871	ENSLAFG00000013589	GPATCH1	99	81.055	Loxodonta_africana
ENSMOCG00000000174	Gpatch1	92	82.532	ENSMFAG00000034418	GPATCH1	96	82.415	Macaca_fascicularis
ENSMOCG00000000174	Gpatch1	92	83.081	ENSMMUG00000011790	GPATCH1	99	81.955	Macaca_mulatta
ENSMOCG00000000174	Gpatch1	92	82.030	ENSMNEG00000045084	GPATCH1	99	80.881	Macaca_nemestrina
ENSMOCG00000000174	Gpatch1	92	71.295	ENSMLEG00000043840	GPATCH1	99	70.999	Mandrillus_leucophaeus
ENSMOCG00000000174	Gpatch1	82	53.149	ENSMZEG00005001926	gpatch1	80	53.275	Maylandia_zebra
ENSMOCG00000000174	Gpatch1	91	63.097	ENSMGAG00000005775	GPATCH1	89	64.109	Meleagris_gallopavo
ENSMOCG00000000174	Gpatch1	91	76.084	ENSMICG00000004829	GPATCH1	93	76.436	Microcebus_murinus
ENSMOCG00000000174	Gpatch1	84	49.161	ENSMMOG00000002140	gpatch1	87	50.687	Mola_mola
ENSMOCG00000000174	Gpatch1	92	70.444	ENSMODG00000012226	GPATCH1	90	70.444	Monodelphis_domestica
ENSMOCG00000000174	Gpatch1	82	53.500	ENSMALG00000014386	gpatch1	82	53.643	Monopterus_albus
ENSMOCG00000000174	Gpatch1	93	90.888	ENSMUSG00000063808	Gpatch1	100	93.878	Mus_musculus
ENSMOCG00000000174	Gpatch1	100	87.957	MGP_PahariEiJ_G0012816	Gpatch1	100	94.898	Mus_pahari
ENSMOCG00000000174	Gpatch1	100	89.462	MGP_SPRETEiJ_G0030681	Gpatch1	100	94.898	Mus_spretus
ENSMOCG00000000174	Gpatch1	92	82.339	ENSMPUG00000007658	GPATCH1	99	81.270	Mustela_putorius_furo
ENSMOCG00000000174	Gpatch1	92	81.733	ENSMLUG00000012161	GPATCH1	99	80.927	Myotis_lucifugus
ENSMOCG00000000174	Gpatch1	92	86.199	ENSNGAG00000012455	Gpatch1	99	85.129	Nannospalax_galili
ENSMOCG00000000174	Gpatch1	92	82.497	ENSNLEG00000007659	GPATCH1	99	81.310	Nomascus_leucogenys
ENSMOCG00000000174	Gpatch1	79	65.395	ENSMEUG00000015174	GPATCH1	79	65.176	Notamacropus_eugenii
ENSMOCG00000000174	Gpatch1	100	80.193	ENSODEG00000007103	GPATCH1	99	80.407	Octodon_degus
ENSMOCG00000000174	Gpatch1	82	53.788	ENSONIG00000003302	gpatch1	91	52.613	Oreochromis_niloticus
ENSMOCG00000000174	Gpatch1	99	69.148	ENSOANG00000012732	GPATCH1	99	67.063	Ornithorhynchus_anatinus
ENSMOCG00000000174	Gpatch1	92	83.488	ENSOCUG00000015905	GPATCH1	99	82.454	Oryctolagus_cuniculus
ENSMOCG00000000174	Gpatch1	90	50.760	ENSORLG00000018706	gpatch1	88	50.524	Oryzias_latipes
ENSMOCG00000000174	Gpatch1	90	48.904	ENSOMEG00000022688	gpatch1	90	50.577	Oryzias_melastigma
ENSMOCG00000000174	Gpatch1	86	83.291	ENSOGAG00000004016	GPATCH1	100	83.291	Otolemur_garnettii
ENSMOCG00000000174	Gpatch1	91	82.290	ENSOARG00000004365	GPATCH1	98	80.911	Ovis_aries
ENSMOCG00000000174	Gpatch1	92	82.497	ENSPPAG00000020990	GPATCH1	99	81.418	Pan_paniscus
ENSMOCG00000000174	Gpatch1	100	81.701	ENSPPRG00000017245	GPATCH1	99	81.701	Panthera_pardus
ENSMOCG00000000174	Gpatch1	100	82.239	ENSPTIG00000019649	GPATCH1	99	82.239	Panthera_tigris_altaica
ENSMOCG00000000174	Gpatch1	92	82.264	ENSPTRG00000010803	GPATCH1	99	81.203	Pan_troglodytes
ENSMOCG00000000174	Gpatch1	92	82.497	ENSPANG00000012374	GPATCH1	96	82.380	Papio_anubis
ENSMOCG00000000174	Gpatch1	82	57.580	ENSPKIG00000020745	gpatch1	77	57.325	Paramormyrops_kingsleyae
ENSMOCG00000000174	Gpatch1	92	63.520	ENSPSIG00000013433	GPATCH1	91	63.182	Pelodiscus_sinensis
ENSMOCG00000000174	Gpatch1	100	89.655	ENSPEMG00000000636	Gpatch1	99	89.116	Peromyscus_maniculatus_bairdii
ENSMOCG00000000174	Gpatch1	92	71.744	ENSPCIG00000021003	GPATCH1	95	71.846	Phascolarctos_cinereus
ENSMOCG00000000174	Gpatch1	70	50.977	ENSPREG00000008264	gpatch1	97	45.465	Poecilia_reticulata
ENSMOCG00000000174	Gpatch1	100	78.733	ENSPPYG00000009824	GPATCH1	99	78.840	Pongo_abelii
ENSMOCG00000000174	Gpatch1	84	70.258	ENSPCAG00000005931	GPATCH1	92	70.741	Procavia_capensis
ENSMOCG00000000174	Gpatch1	94	78.995	ENSPCOG00000009674	GPATCH1	97	80.328	Propithecus_coquereli
ENSMOCG00000000174	Gpatch1	84	82.090	ENSPVAG00000017767	GPATCH1	91	82.090	Pteropus_vampyrus
ENSMOCG00000000174	Gpatch1	82	54.061	ENSPNYG00000018189	gpatch1	89	54.188	Pundamilia_nyererei
ENSMOCG00000000174	Gpatch1	92	51.518	ENSPNAG00000013187	gpatch1	90	52.556	Pygocentrus_nattereri
ENSMOCG00000000174	Gpatch1	93	89.965	ENSRNOG00000011584	Gpatch1	99	88.578	Rattus_norvegicus
ENSMOCG00000000174	Gpatch1	100	73.792	ENSRBIG00000034723	GPATCH1	92	75.322	Rhinopithecus_bieti
ENSMOCG00000000174	Gpatch1	100	81.183	ENSRROG00000024428	GPATCH1	99	81.075	Rhinopithecus_roxellana
ENSMOCG00000000174	Gpatch1	92	82.614	ENSSBOG00000034650	GPATCH1	99	81.310	Saimiri_boliviensis_boliviensis
ENSMOCG00000000174	Gpatch1	100	69.412	ENSSHAG00000016016	GPATCH1	99	69.626	Sarcophilus_harrisii
ENSMOCG00000000174	Gpatch1	82	55.428	ENSSFOG00015011535	gpatch1	89	54.085	Scleropages_formosus
ENSMOCG00000000174	Gpatch1	82	49.574	ENSSMAG00000002883	gpatch1	93	48.128	Scophthalmus_maximus
ENSMOCG00000000174	Gpatch1	82	51.792	ENSSDUG00000007444	gpatch1	90	49.836	Seriola_dumerili
ENSMOCG00000000174	Gpatch1	82	51.478	ENSSLDG00000002856	gpatch1	89	52.677	Seriola_lalandi_dorsalis
ENSMOCG00000000174	Gpatch1	72	83.482	ENSSARG00000004108	GPATCH1	72	83.482	Sorex_araneus
ENSMOCG00000000174	Gpatch1	92	83.255	ENSSSCG00000002865	GPATCH1	94	83.255	Sus_scrofa
ENSMOCG00000000174	Gpatch1	93	63.314	ENSTGUG00000009401	GPATCH1	91	64.244	Taeniopygia_guttata
ENSMOCG00000000174	Gpatch1	82	52.461	ENSTRUG00000005785	-	90	49.711	Takifugu_rubripes
ENSMOCG00000000174	Gpatch1	82	52.461	ENSTRUG00000025081	gpatch1	90	49.711	Takifugu_rubripes
ENSMOCG00000000174	Gpatch1	82	52.842	ENSTNIG00000002554	gpatch1	97	52.994	Tetraodon_nigroviridis
ENSMOCG00000000174	Gpatch1	64	70.574	ENSTBEG00000007750	-	84	70.574	Tupaia_belangeri
ENSMOCG00000000174	Gpatch1	92	74.212	ENSTTRG00000012221	GPATCH1	99	74.356	Tursiops_truncatus
ENSMOCG00000000174	Gpatch1	91	82.742	ENSUMAG00000014645	GPATCH1	96	83.458	Ursus_maritimus
ENSMOCG00000000174	Gpatch1	80	95.429	ENSVPAG00000010313	GPATCH1	86	95.109	Vicugna_pacos
ENSMOCG00000000174	Gpatch1	95	82.139	ENSVVUG00000016572	GPATCH1	91	82.126	Vulpes_vulpes
ENSMOCG00000000174	Gpatch1	100	49.844	ENSXETG00000018276	gpatch1	93	52.727	Xenopus_tropicalis