EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000000234 (Gene tree)
Gene ID: 101987740
Gene Symbol: Arl5c
Alias: Arl12
Full Name: ADP ribosylation factor like GTPase 5C
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 5630 bases
Position: chrJH996461.1:2392523-2398152
Accession: 101987740
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000000277	MMR_HSR1	PF01926.23	9.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000000304	-	517	XM_005368304	ENSMOCP00000000277	167 (aa)	XP_005368361	UPI00038BE386

Gene Model

Click here to download ENSMOCG00000000234's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000000234's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000000234	Arl5c	87	35.220	ENSMOCG00000006454	Arl11	90	35.220
ENSMOCG00000000234	Arl5c	87	39.241	ENSMOCG00000019685	Arl2	86	39.241
ENSMOCG00000000234	Arl5c	96	33.146	ENSMOCG00000022581	Arl6	96	33.146
ENSMOCG00000000234	Arl5c	96	40.462	ENSMOCG00000022861	Arf5	96	40.462
ENSMOCG00000000234	Arl5c	98	41.477	ENSMOCG00000020182	Arf3	97	41.477
ENSMOCG00000000234	Arl5c	88	38.182	ENSMOCG00000019911	Arl4a	83	38.182
ENSMOCG00000000234	Arl5c	94	37.430	ENSMOCG00000003005	Arfrp1	89	37.430
ENSMOCG00000000234	Arl5c	87	36.585	ENSMOCG00000006232	Arl4c	85	36.585
ENSMOCG00000000234	Arl5c	88	40.252	ENSMOCG00000005852	Arl1	90	40.741
ENSMOCG00000000234	Arl5c	98	67.429	ENSMOCG00000013705	Arl5b	97	67.429
ENSMOCG00000000234	Arl5c	66	33.613	ENSMOCG00000000452	Rab12	53	33.613
ENSMOCG00000000234	Arl5c	89	36.196	ENSMOCG00000004173	Arl14	86	36.196
ENSMOCG00000000234	Arl5c	85	35.625	ENSMOCG00000002133	Arl4d	80	35.625
ENSMOCG00000000234	Arl5c	96	37.572	ENSMOCG00000015961	Arl3	95	37.572
ENSMOCG00000000234	Arl5c	98	42.045	ENSMOCG00000011336	Arf2	97	42.045
ENSMOCG00000000234	Arl5c	98	66.857	ENSMOCG00000019795	Arl5a	98	66.857
ENSMOCG00000000234	Arl5c	98	42.614	ENSMOCG00000005344	Arf1	97	42.614

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000000234	Arl5c	100	73.184	ENSAMEG00000004195	ARL5C	99	73.184	Ailuropoda_melanoleuca
ENSMOCG00000000234	Arl5c	99	72.472	ENSACAG00000003879	-	99	72.472	Anolis_carolinensis
ENSMOCG00000000234	Arl5c	100	76.536	ENSCAFG00000016525	ARL5C	100	76.536	Canis_familiaris
ENSMOCG00000000234	Arl5c	99	77.401	ENSCHIG00000008208	ARL5C	99	77.401	Capra_hircus
ENSMOCG00000000234	Arl5c	63	80.189	ENSCHOG00000013232	-	100	80.189	Choloepus_hoffmanni
ENSMOCG00000000234	Arl5c	99	76.836	ENSCGRG00001000695	Arl5c	99	76.836	Cricetulus_griseus_chok1gshd
ENSMOCG00000000234	Arl5c	99	77.401	ENSCGRG00000007376	Arl5c	99	77.401	Cricetulus_griseus_crigri
ENSMOCG00000000234	Arl5c	100	76.536	ENSDNOG00000019741	ARL5C	100	76.536	Dasypus_novemcinctus
ENSMOCG00000000234	Arl5c	99	77.966	ENSDORG00000016304	Arl5c	99	77.966	Dipodomys_ordii
ENSMOCG00000000234	Arl5c	91	78.659	ENSEASG00005001922	ARL5C	76	78.659	Equus_asinus_asinus
ENSMOCG00000000234	Arl5c	100	79.330	ENSECAG00000009024	ARL5C	100	79.330	Equus_caballus
ENSMOCG00000000234	Arl5c	100	78.212	ENSFCAG00000009962	ARL5C	100	78.212	Felis_catus
ENSMOCG00000000234	Arl5c	99	82.486	ENSSTOG00000011104	ARL5C	99	82.486	Ictidomys_tridecemlineatus
ENSMOCG00000000234	Arl5c	100	70.950	ENSLACG00000015332	ARL5C	100	70.950	Latimeria_chalumnae
ENSMOCG00000000234	Arl5c	100	80.447	ENSLAFG00000018248	ARL5C	99	80.447	Loxodonta_africana
ENSMOCG00000000234	Arl5c	99	73.446	ENSMAUG00000012845	Arl5c	87	73.446	Mesocricetus_auratus
ENSMOCG00000000234	Arl5c	100	77.654	ENSMICG00000002661	ARL5C	100	77.654	Microcebus_murinus
ENSMOCG00000000234	Arl5c	100	84.358	MGP_CAROLIEiJ_G0017071	Arl5c	100	84.358	Mus_caroli
ENSMOCG00000000234	Arl5c	100	84.358	ENSMUSG00000038352	Arl5c	100	84.358	Mus_musculus
ENSMOCG00000000234	Arl5c	100	84.358	MGP_PahariEiJ_G0018200	Arl5c	100	84.358	Mus_pahari
ENSMOCG00000000234	Arl5c	100	84.358	MGP_SPRETEiJ_G0017917	Arl5c	100	84.358	Mus_spretus
ENSMOCG00000000234	Arl5c	100	76.536	ENSMLUG00000030149	ARL5C	99	76.536	Myotis_lucifugus
ENSMOCG00000000234	Arl5c	100	77.654	ENSOGAG00000005894	ARL5C	100	77.654	Otolemur_garnettii
ENSMOCG00000000234	Arl5c	100	77.095	ENSOARG00000010377	ARL5C	99	77.095	Ovis_aries
ENSMOCG00000000234	Arl5c	100	77.654	ENSPPRG00000000975	ARL5C	100	77.654	Panthera_pardus
ENSMOCG00000000234	Arl5c	100	77.095	ENSPTIG00000017487	ARL5C	100	77.095	Panthera_tigris_altaica
ENSMOCG00000000234	Arl5c	100	82.682	ENSPEMG00000008932	Arl5c	100	82.682	Peromyscus_maniculatus_bairdii
ENSMOCG00000000234	Arl5c	100	78.771	ENSPCOG00000028489	ARL5C	100	78.771	Propithecus_coquereli
ENSMOCG00000000234	Arl5c	93	77.381	ENSPVAG00000008495	ARL5C	99	77.381	Pteropus_vampyrus
ENSMOCG00000000234	Arl5c	100	82.682	ENSRNOG00000036880	Arl5c	100	82.682	Rattus_norvegicus
ENSMOCG00000000234	Arl5c	96	69.767	ENSSBOG00000021022	ARL5C	98	69.767	Saimiri_boliviensis_boliviensis
ENSMOCG00000000234	Arl5c	95	69.591	ENSSPUG00000007555	ARL5C	100	71.166	Sphenodon_punctatus
ENSMOCG00000000234	Arl5c	100	76.536	ENSTBEG00000007274	ARL5C	100	76.536	Tupaia_belangeri
ENSMOCG00000000234	Arl5c	100	76.536	ENSUAMG00000012299	ARL5C	100	76.536	Ursus_americanus
ENSMOCG00000000234	Arl5c	100	77.095	ENSUMAG00000017197	ARL5C	100	77.095	Ursus_maritimus
ENSMOCG00000000234	Arl5c	100	69.832	ENSXETG00000023713	arl5c	92	69.832	Xenopus_tropicalis