EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000000242 (Gene tree)
Gene ID: 101987143
Gene Symbol: Prpf3
Alias: 3632413F13Rik
Full Name: pre-mRNA processing factor 3
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 27535 bases
Position: chr21:2631510-2659044
Accession: 101987143
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000000286	PRP3	PF08572.10	2.4e-79	1	1
ENSMOCP00000000286	PWI	PF01480.17	2.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000000315	-	345	-	ENSMOCP00000000288	114 (aa)	-	-
ENSMOCT00000000313	-	2277	XM_005356958	ENSMOCP00000000286	683 (aa)	XP_005357015	UPI00038C3C8B

Gene Model

Click here to download ENSMOCG00000000242's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000000242's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000000242	Prpf3	100	99.854	ENSG00000117360	PRPF3	100	99.854	Homo_sapiens
ENSMOCG00000000242	Prpf3	100	71.751	ENSAPOG00000015584	prpf3	99	72.316	Acanthochromis_polyacanthus
ENSMOCG00000000242	Prpf3	100	99.707	ENSAMEG00000001630	PRPF3	100	99.707	Ailuropoda_melanoleuca
ENSMOCG00000000242	Prpf3	100	71.994	ENSACIG00000007876	prpf3	99	71.004	Amphilophus_citrinellus
ENSMOCG00000000242	Prpf3	100	71.045	ENSAOCG00000011449	prpf3	99	72.262	Amphiprion_ocellaris
ENSMOCG00000000242	Prpf3	100	70.940	ENSATEG00000023583	prpf3	99	71.550	Anabas_testudineus
ENSMOCG00000000242	Prpf3	100	95.029	ENSAPLG00000002440	PRPF3	100	95.029	Anas_platyrhynchos
ENSMOCG00000000242	Prpf3	100	92.576	ENSACAG00000003176	PRPF3	100	92.868	Anolis_carolinensis
ENSMOCG00000000242	Prpf3	100	99.854	ENSANAG00000026138	PRPF3	100	99.854	Aotus_nancymaae
ENSMOCG00000000242	Prpf3	100	72.294	ENSACLG00000020127	prpf3	99	72.006	Astatotilapia_calliptera
ENSMOCG00000000242	Prpf3	100	73.803	ENSAMXG00000007306	prpf3	99	73.380	Astyanax_mexicanus
ENSMOCG00000000242	Prpf3	100	99.854	ENSBTAG00000013946	PRPF3	100	99.854	Bos_taurus
ENSMOCG00000000242	Prpf3	81	38.612	WBGene00010844	prp-3	82	38.750	Caenorhabditis_elegans
ENSMOCG00000000242	Prpf3	100	99.854	ENSCJAG00000009926	PRPF3	100	99.854	Callithrix_jacchus
ENSMOCG00000000242	Prpf3	100	99.854	ENSCAFG00000011820	PRPF3	100	99.854	Canis_familiaris
ENSMOCG00000000242	Prpf3	80	99.817	ENSCAFG00020019653	PRPF3	100	99.817	Canis_lupus_dingo
ENSMOCG00000000242	Prpf3	100	99.854	ENSCHIG00000015434	PRPF3	100	99.854	Capra_hircus
ENSMOCG00000000242	Prpf3	100	99.268	ENSTSYG00000001383	PRPF3	100	99.268	Carlito_syrichta
ENSMOCG00000000242	Prpf3	93	82.390	ENSCAPG00000017812	PRPF3	95	82.862	Cavia_aperea
ENSMOCG00000000242	Prpf3	100	99.414	ENSCPOG00000008068	PRPF3	100	99.414	Cavia_porcellus
ENSMOCG00000000242	Prpf3	100	99.854	ENSCCAG00000026380	PRPF3	100	99.854	Cebus_capucinus
ENSMOCG00000000242	Prpf3	100	84.448	ENSCATG00000041778	PRPF3	100	84.448	Cercocebus_atys
ENSMOCG00000000242	Prpf3	100	99.707	ENSCLAG00000015009	PRPF3	100	99.707	Chinchilla_lanigera
ENSMOCG00000000242	Prpf3	77	99.645	ENSCHOG00000011645	PRPF3	77	99.645	Choloepus_hoffmanni
ENSMOCG00000000242	Prpf3	100	96.345	ENSCPBG00000008216	PRPF3	100	96.345	Chrysemys_picta_bellii
ENSMOCG00000000242	Prpf3	61	59.189	ENSCING00000003312	-	99	58.711	Ciona_intestinalis
ENSMOCG00000000242	Prpf3	83	54.035	ENSCSAVG00000008720	-	94	54.792	Ciona_savignyi
ENSMOCG00000000242	Prpf3	100	99.122	ENSCANG00000036769	PRPF3	100	99.122	Colobus_angolensis_palliatus
ENSMOCG00000000242	Prpf3	100	99.854	ENSCGRG00001019100	Prpf3	100	99.854	Cricetulus_griseus_chok1gshd
ENSMOCG00000000242	Prpf3	100	99.854	ENSCGRG00000007322	Prpf3	100	99.854	Cricetulus_griseus_crigri
ENSMOCG00000000242	Prpf3	100	72.011	ENSCSEG00000002532	prpf3	99	70.605	Cynoglossus_semilaevis
ENSMOCG00000000242	Prpf3	100	72.624	ENSCVAG00000009318	prpf3	99	72.340	Cyprinodon_variegatus
ENSMOCG00000000242	Prpf3	100	72.973	ENSDARG00000086425	prpf3	99	72.688	Danio_rerio
ENSMOCG00000000242	Prpf3	100	89.312	ENSDNOG00000005904	PRPF3	100	90.483	Dasypus_novemcinctus
ENSMOCG00000000242	Prpf3	93	99.527	ENSDORG00000008664	Prpf3	100	99.527	Dipodomys_ordii
ENSMOCG00000000242	Prpf3	81	53.086	FBgn0036915	Prp3	99	53.273	Drosophila_melanogaster
ENSMOCG00000000242	Prpf3	100	98.389	ENSETEG00000019124	PRPF3	100	98.389	Echinops_telfairi
ENSMOCG00000000242	Prpf3	100	63.946	ENSEBUG00000011680	prpf3	99	63.946	Eptatretus_burgeri
ENSMOCG00000000242	Prpf3	100	99.707	ENSEASG00005001566	PRPF3	100	99.707	Equus_asinus_asinus
ENSMOCG00000000242	Prpf3	100	99.854	ENSECAG00000019840	PRPF3	100	99.854	Equus_caballus
ENSMOCG00000000242	Prpf3	85	99.291	ENSEEUG00000007338	PRPF3	85	99.291	Erinaceus_europaeus
ENSMOCG00000000242	Prpf3	100	65.906	ENSELUG00000013624	prpf3	99	66.334	Esox_lucius
ENSMOCG00000000242	Prpf3	100	99.854	ENSFCAG00000013940	PRPF3	100	99.854	Felis_catus
ENSMOCG00000000242	Prpf3	100	99.268	ENSFDAG00000010365	PRPF3	100	99.268	Fukomys_damarensis
ENSMOCG00000000242	Prpf3	100	73.132	ENSFHEG00000021746	prpf3	99	72.845	Fundulus_heteroclitus
ENSMOCG00000000242	Prpf3	100	71.469	ENSGMOG00000008535	prpf3	99	71.328	Gadus_morhua
ENSMOCG00000000242	Prpf3	100	94.883	ENSGALG00000028205	PRPF3	100	94.883	Gallus_gallus
ENSMOCG00000000242	Prpf3	100	72.206	ENSGAFG00000012671	prpf3	99	71.920	Gambusia_affinis
ENSMOCG00000000242	Prpf3	100	70.963	ENSGACG00000011792	prpf3	99	71.246	Gasterosteus_aculeatus
ENSMOCG00000000242	Prpf3	100	96.053	ENSGAGG00000013765	PRPF3	100	95.811	Gopherus_agassizii
ENSMOCG00000000242	Prpf3	86	99.704	ENSGGOG00000013174	PRPF3	100	99.704	Gorilla_gorilla
ENSMOCG00000000242	Prpf3	100	72.727	ENSHBUG00000003493	prpf3	99	72.439	Haplochromis_burtoni
ENSMOCG00000000242	Prpf3	100	70.132	ENSHGLG00000016033	-	100	70.717	Heterocephalus_glaber_female
ENSMOCG00000000242	Prpf3	100	99.414	ENSHGLG00000016569	PRPF3	100	99.414	Heterocephalus_glaber_female
ENSMOCG00000000242	Prpf3	100	99.414	ENSHGLG00100007590	PRPF3	100	99.414	Heterocephalus_glaber_male
ENSMOCG00000000242	Prpf3	100	70.717	ENSHGLG00100008951	-	95	90.909	Heterocephalus_glaber_male
ENSMOCG00000000242	Prpf3	100	68.421	ENSHCOG00000014058	prpf3	99	68.137	Hippocampus_comes
ENSMOCG00000000242	Prpf3	100	73.466	ENSIPUG00000000902	PRPF3	99	73.789	Ictalurus_punctatus
ENSMOCG00000000242	Prpf3	100	99.854	ENSSTOG00000001889	PRPF3	100	99.854	Ictidomys_tridecemlineatus
ENSMOCG00000000242	Prpf3	100	70.881	ENSKMAG00000001390	prpf3	99	70.597	Kryptolebias_marmoratus
ENSMOCG00000000242	Prpf3	100	70.266	ENSLBEG00000026310	prpf3	99	71.186	Labrus_bergylta
ENSMOCG00000000242	Prpf3	93	82.418	ENSLACG00000010541	PRPF3	100	82.575	Latimeria_chalumnae
ENSMOCG00000000242	Prpf3	100	99.561	ENSLAFG00000004713	PRPF3	100	99.561	Loxodonta_africana
ENSMOCG00000000242	Prpf3	100	99.854	ENSMFAG00000039791	PRPF3	100	99.854	Macaca_fascicularis
ENSMOCG00000000242	Prpf3	90	99.837	ENSMMUG00000016301	PRPF3	98	99.837	Macaca_mulatta
ENSMOCG00000000242	Prpf3	100	99.854	ENSMNEG00000038161	PRPF3	100	99.854	Macaca_nemestrina
ENSMOCG00000000242	Prpf3	86	99.704	ENSMLEG00000040609	PRPF3	100	99.704	Mandrillus_leucophaeus
ENSMOCG00000000242	Prpf3	99	67.109	ENSMLEG00000041065	-	98	66.519	Mandrillus_leucophaeus
ENSMOCG00000000242	Prpf3	100	71.955	ENSMAMG00000014968	prpf3	99	71.813	Mastacembelus_armatus
ENSMOCG00000000242	Prpf3	100	70.687	ENSMZEG00005015970	prpf3	99	70.547	Maylandia_zebra
ENSMOCG00000000242	Prpf3	100	94.883	ENSMGAG00000000707	PRPF3	100	94.883	Meleagris_gallopavo
ENSMOCG00000000242	Prpf3	100	99.561	ENSMAUG00000017112	Prpf3	100	99.561	Mesocricetus_auratus
ENSMOCG00000000242	Prpf3	100	99.561	ENSMICG00000015386	PRPF3	100	99.561	Microcebus_murinus
ENSMOCG00000000242	Prpf3	100	66.432	ENSMMOG00000016131	prpf3	99	67.234	Mola_mola
ENSMOCG00000000242	Prpf3	100	98.243	ENSMODG00000018774	PRPF3	100	98.243	Monodelphis_domestica
ENSMOCG00000000242	Prpf3	100	70.429	ENSMALG00000007257	prpf3	99	70.429	Monopterus_albus
ENSMOCG00000000242	Prpf3	100	99.414	MGP_CAROLIEiJ_G0025354	Prpf3	100	99.414	Mus_caroli
ENSMOCG00000000242	Prpf3	100	99.414	ENSMUSG00000015748	Prpf3	100	99.414	Mus_musculus
ENSMOCG00000000242	Prpf3	100	99.268	MGP_PahariEiJ_G0026798	Prpf3	100	99.268	Mus_pahari
ENSMOCG00000000242	Prpf3	100	99.414	MGP_SPRETEiJ_G0026298	Prpf3	100	99.414	Mus_spretus
ENSMOCG00000000242	Prpf3	100	96.633	ENSMPUG00000005080	PRPF3	100	96.633	Mustela_putorius_furo
ENSMOCG00000000242	Prpf3	100	99.415	ENSMLUG00000004646	-	100	99.415	Myotis_lucifugus
ENSMOCG00000000242	Prpf3	100	99.854	ENSNGAG00000000910	Prpf3	100	99.854	Nannospalax_galili
ENSMOCG00000000242	Prpf3	100	70.350	ENSNBRG00000003462	prpf3	99	70.251	Neolamprologus_brichardi
ENSMOCG00000000242	Prpf3	90	99.837	ENSNLEG00000009841	PRPF3	100	99.837	Nomascus_leucogenys
ENSMOCG00000000242	Prpf3	83	100.000	ENSMEUG00000008733	PRPF3	89	100.000	Notamacropus_eugenii
ENSMOCG00000000242	Prpf3	100	99.561	ENSOPRG00000010139	PRPF3	100	99.561	Ochotona_princeps
ENSMOCG00000000242	Prpf3	100	99.122	ENSODEG00000011363	-	100	99.122	Octodon_degus
ENSMOCG00000000242	Prpf3	100	73.623	ENSODEG00000014412	-	100	73.623	Octodon_degus
ENSMOCG00000000242	Prpf3	100	70.646	ENSONIG00000006394	prpf3	99	70.506	Oreochromis_niloticus
ENSMOCG00000000242	Prpf3	100	65.462	ENSOANG00000015441	PRPF3	100	65.262	Ornithorhynchus_anatinus
ENSMOCG00000000242	Prpf3	100	99.854	ENSOCUG00000011760	PRPF3	100	99.854	Oryctolagus_cuniculus
ENSMOCG00000000242	Prpf3	100	72.650	ENSORLG00000010330	prpf3	99	71.755	Oryzias_latipes
ENSMOCG00000000242	Prpf3	100	72.650	ENSORLG00020009054	prpf3	99	71.755	Oryzias_latipes_hni
ENSMOCG00000000242	Prpf3	100	72.365	ENSORLG00015015016	prpf3	99	71.469	Oryzias_latipes_hsok
ENSMOCG00000000242	Prpf3	100	72.063	ENSOMEG00000000940	prpf3	99	71.777	Oryzias_melastigma
ENSMOCG00000000242	Prpf3	100	93.713	ENSOGAG00000005352	PRPF3	100	93.713	Otolemur_garnettii
ENSMOCG00000000242	Prpf3	100	99.854	ENSOARG00000020798	PRPF3	100	99.854	Ovis_aries
ENSMOCG00000000242	Prpf3	99	76.113	ENSPPAG00000043769	-	99	75.668	Pan_paniscus
ENSMOCG00000000242	Prpf3	100	99.707	ENSPPAG00000030983	PRPF3	100	99.707	Pan_paniscus
ENSMOCG00000000242	Prpf3	100	99.854	ENSPPRG00000000731	PRPF3	100	99.854	Panthera_pardus
ENSMOCG00000000242	Prpf3	100	99.854	ENSPTIG00000005516	PRPF3	100	99.854	Panthera_tigris_altaica
ENSMOCG00000000242	Prpf3	99	75.223	ENSPTRG00000047819	-	99	74.777	Pan_troglodytes
ENSMOCG00000000242	Prpf3	100	99.854	ENSPTRG00000001254	PRPF3	100	99.854	Pan_troglodytes
ENSMOCG00000000242	Prpf3	100	99.707	ENSPANG00000000499	PRPF3	100	99.707	Papio_anubis
ENSMOCG00000000242	Prpf3	100	74.322	ENSPKIG00000010501	prpf3	99	74.465	Paramormyrops_kingsleyae
ENSMOCG00000000242	Prpf3	100	96.053	ENSPSIG00000014877	PRPF3	100	95.906	Pelodiscus_sinensis
ENSMOCG00000000242	Prpf3	100	67.438	ENSPMGG00000007776	prpf3	99	66.570	Periophthalmus_magnuspinnatus
ENSMOCG00000000242	Prpf3	100	99.854	ENSPEMG00000011672	Prpf3	100	99.854	Peromyscus_maniculatus_bairdii
ENSMOCG00000000242	Prpf3	63	72.146	ENSPMAG00000005588	prpf3	99	69.757	Petromyzon_marinus
ENSMOCG00000000242	Prpf3	100	98.243	ENSPCIG00000008795	PRPF3	100	98.243	Phascolarctos_cinereus
ENSMOCG00000000242	Prpf3	100	72.238	ENSPFOG00000013638	prpf3	99	71.671	Poecilia_formosa
ENSMOCG00000000242	Prpf3	100	72.636	ENSPLAG00000018103	prpf3	99	72.017	Poecilia_latipinna
ENSMOCG00000000242	Prpf3	100	72.350	ENSPMEG00000023546	prpf3	99	72.063	Poecilia_mexicana
ENSMOCG00000000242	Prpf3	100	72.143	ENSPREG00000017216	prpf3	99	71.857	Poecilia_reticulata
ENSMOCG00000000242	Prpf3	93	99.843	ENSPPYG00000000900	PRPF3	99	99.843	Pongo_abelii
ENSMOCG00000000242	Prpf3	75	87.354	ENSPPYG00000018646	-	100	87.354	Pongo_abelii
ENSMOCG00000000242	Prpf3	87	98.816	ENSPCAG00000014908	PRPF3	87	98.816	Procavia_capensis
ENSMOCG00000000242	Prpf3	100	99.707	ENSPCOG00000013828	PRPF3	100	99.707	Propithecus_coquereli
ENSMOCG00000000242	Prpf3	100	98.975	ENSPVAG00000013472	PRPF3	100	98.975	Pteropus_vampyrus
ENSMOCG00000000242	Prpf3	100	72.727	ENSPNYG00000004279	prpf3	99	72.439	Pundamilia_nyererei
ENSMOCG00000000242	Prpf3	100	72.958	ENSPNAG00000001799	prpf3	99	73.099	Pygocentrus_nattereri
ENSMOCG00000000242	Prpf3	100	99.268	ENSRNOG00000025629	Prpf3	100	99.268	Rattus_norvegicus
ENSMOCG00000000242	Prpf3	83	96.454	ENSRBIG00000028854	PRPF3	98	96.454	Rhinopithecus_bieti
ENSMOCG00000000242	Prpf3	100	99.854	ENSRROG00000027464	PRPF3	100	99.854	Rhinopithecus_roxellana
ENSMOCG00000000242	Prpf3	100	92.826	ENSSBOG00000033104	PRPF3	100	92.826	Saimiri_boliviensis_boliviensis
ENSMOCG00000000242	Prpf3	100	98.099	ENSSHAG00000009548	PRPF3	100	98.099	Sarcophilus_harrisii
ENSMOCG00000000242	Prpf3	100	73.662	ENSSFOG00015022014	prpf3	99	73.239	Scleropages_formosus
ENSMOCG00000000242	Prpf3	100	71.950	ENSSMAG00000015739	prpf3	99	71.669	Scophthalmus_maximus
ENSMOCG00000000242	Prpf3	100	68.867	ENSSDUG00000006840	prpf3	99	68.867	Seriola_dumerili
ENSMOCG00000000242	Prpf3	100	70.769	ENSSLDG00000015423	prpf3	99	71.049	Seriola_lalandi_dorsalis
ENSMOCG00000000242	Prpf3	100	99.268	ENSSARG00000011064	PRPF3	100	99.268	Sorex_araneus
ENSMOCG00000000242	Prpf3	100	92.219	ENSSPUG00000000809	PRPF3	100	92.219	Sphenodon_punctatus
ENSMOCG00000000242	Prpf3	100	71.067	ENSSPAG00000018721	prpf3	99	71.994	Stegastes_partitus
ENSMOCG00000000242	Prpf3	100	99.854	ENSSSCG00000030119	PRPF3	100	99.854	Sus_scrofa
ENSMOCG00000000242	Prpf3	100	80.994	ENSTGUG00000004552	PRPF3	100	80.994	Taeniopygia_guttata
ENSMOCG00000000242	Prpf3	100	71.925	ENSTRUG00000014923	prpf3	99	71.635	Takifugu_rubripes
ENSMOCG00000000242	Prpf3	100	72.624	ENSTNIG00000008058	prpf3	100	71.449	Tetraodon_nigroviridis
ENSMOCG00000000242	Prpf3	82	100.000	ENSTBEG00000014072	PRPF3	88	100.000	Tupaia_belangeri
ENSMOCG00000000242	Prpf3	100	93.558	ENSTTRG00000010616	PRPF3	100	93.558	Tursiops_truncatus
ENSMOCG00000000242	Prpf3	80	99.818	ENSUAMG00000009345	PRPF3	100	99.818	Ursus_americanus
ENSMOCG00000000242	Prpf3	100	99.854	ENSUMAG00000003720	PRPF3	100	99.854	Ursus_maritimus
ENSMOCG00000000242	Prpf3	89	100.000	ENSVPAG00000005425	PRPF3	89	100.000	Vicugna_pacos
ENSMOCG00000000242	Prpf3	100	99.854	ENSVVUG00000007933	PRPF3	100	99.854	Vulpes_vulpes
ENSMOCG00000000242	Prpf3	100	87.663	ENSXETG00000018654	prpf3	100	87.663	Xenopus_tropicalis
ENSMOCG00000000242	Prpf3	100	72.350	ENSXMAG00000016347	prpf3	99	71.733	Xiphophorus_maculatus