EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000000257 (Gene tree)
Gene ID: 101980483
Gene Symbol: Ddx1
Alias: -
Full Name: DEAD-box helicase 1
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 26680 bases
Position: chrJH996440.1:7762289-7788968
Accession: 101980483
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000000330	DEAD	PF00270.29	2.6e-80	1	1
ENSMOCP00000000326	DEAD	PF00270.29	2.6e-80	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000000353	-	2517	XM_005366540	ENSMOCP00000000326	740 (aa)	XP_005366597	UPI00038C0237
ENSMOCT00000000357	-	2223	-	ENSMOCP00000000330	740 (aa)	-	-

Gene Model

Click here to download ENSMOCG00000000257's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000000257's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000000257	Ddx1	52	45.098	ENSMOCG00000002068	Ddx6	67	45.098
ENSMOCG00000000257	Ddx1	53	38.710	ENSMOCG00000009815	Ddx28	67	38.710
ENSMOCG00000000257	Ddx1	56	40.580	ENSMOCG00000010015	Ddx41	57	40.580
ENSMOCG00000000257	Ddx1	54	49.180	ENSMOCG00000016782	Ddx56	68	49.180
ENSMOCG00000000257	Ddx1	60	46.875	ENSMOCG00000003693	Ddx47	86	46.875
ENSMOCG00000000257	Ddx1	54	39.344	ENSMOCG00000020938	Ddx31	57	39.344
ENSMOCG00000000257	Ddx1	55	41.071	ENSMOCG00000009654	Ddx52	60	41.071
ENSMOCG00000000257	Ddx1	54	39.394	ENSMOCG00000018690	Ddx49	72	39.394
ENSMOCG00000000257	Ddx1	55	43.860	ENSMOCG00000016551	Ddx59	57	43.860

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000000257	Ddx1	100	97.703	ENSG00000079785	DDX1	100	97.703	Homo_sapiens
ENSMOCG00000000257	Ddx1	100	84.189	ENSAPOG00000003166	ddx1	100	84.189	Acanthochromis_polyacanthus
ENSMOCG00000000257	Ddx1	99	97.700	ENSAMEG00000001071	DDX1	99	97.700	Ailuropoda_melanoleuca
ENSMOCG00000000257	Ddx1	89	82.901	ENSACIG00000017422	ddx1	99	82.290	Amphilophus_citrinellus
ENSMOCG00000000257	Ddx1	89	82.371	ENSAOCG00000015436	ddx1	94	83.805	Amphiprion_ocellaris
ENSMOCG00000000257	Ddx1	100	85.000	ENSAPEG00000007699	ddx1	100	85.000	Amphiprion_percula
ENSMOCG00000000257	Ddx1	94	84.241	ENSATEG00000003965	ddx1	98	83.817	Anabas_testudineus
ENSMOCG00000000257	Ddx1	100	92.608	ENSAPLG00000011093	DDX1	100	92.608	Anas_platyrhynchos
ENSMOCG00000000257	Ddx1	94	91.404	ENSACAG00000011036	DDX1	99	91.404	Anolis_carolinensis
ENSMOCG00000000257	Ddx1	100	97.973	ENSANAG00000037912	DDX1	100	97.973	Aotus_nancymaae
ENSMOCG00000000257	Ddx1	99	84.490	ENSACLG00000008850	ddx1	99	83.486	Astatotilapia_calliptera
ENSMOCG00000000257	Ddx1	100	84.595	ENSAMXG00000002100	ddx1	100	84.595	Astyanax_mexicanus
ENSMOCG00000000257	Ddx1	100	97.162	ENSBTAG00000009906	DDX1	100	97.162	Bos_taurus
ENSMOCG00000000257	Ddx1	98	47.581	WBGene00021938	Y55F3BR.1	98	47.581	Caenorhabditis_elegans
ENSMOCG00000000257	Ddx1	100	97.973	ENSCJAG00000007076	DDX1	100	97.973	Callithrix_jacchus
ENSMOCG00000000257	Ddx1	100	97.838	ENSCAFG00000003686	DDX1	100	97.838	Canis_familiaris
ENSMOCG00000000257	Ddx1	100	97.838	ENSCAFG00020026083	DDX1	100	97.838	Canis_lupus_dingo
ENSMOCG00000000257	Ddx1	100	97.162	ENSCHIG00000011046	DDX1	100	97.162	Capra_hircus
ENSMOCG00000000257	Ddx1	100	98.514	ENSTSYG00000002477	-	100	98.514	Carlito_syrichta
ENSMOCG00000000257	Ddx1	99	70.014	ENSTSYG00000037396	-	98	73.374	Carlito_syrichta
ENSMOCG00000000257	Ddx1	86	77.294	ENSCAPG00000008906	-	93	77.294	Cavia_aperea
ENSMOCG00000000257	Ddx1	68	96.414	ENSCPOG00000032467	-	100	96.414	Cavia_porcellus
ENSMOCG00000000257	Ddx1	88	94.793	ENSCPOG00000009816	-	96	94.793	Cavia_porcellus
ENSMOCG00000000257	Ddx1	100	97.973	ENSCCAG00000030085	DDX1	100	97.973	Cebus_capucinus
ENSMOCG00000000257	Ddx1	100	97.838	ENSCATG00000033924	DDX1	100	97.838	Cercocebus_atys
ENSMOCG00000000257	Ddx1	100	97.162	ENSCLAG00000005434	DDX1	100	97.162	Chinchilla_lanigera
ENSMOCG00000000257	Ddx1	100	97.838	ENSCSAG00000007883	DDX1	100	97.838	Chlorocebus_sabaeus
ENSMOCG00000000257	Ddx1	73	98.100	ENSCHOG00000002171	DDX1	74	98.100	Choloepus_hoffmanni
ENSMOCG00000000257	Ddx1	99	87.364	ENSCPBG00000013330	DDX1	99	92.432	Chrysemys_picta_bellii
ENSMOCG00000000257	Ddx1	100	65.818	ENSCING00000001176	-	100	65.642	Ciona_intestinalis
ENSMOCG00000000257	Ddx1	98	60.302	ENSCSAVG00000003028	-	99	60.302	Ciona_savignyi
ENSMOCG00000000257	Ddx1	100	97.703	ENSCANG00000031530	DDX1	100	97.703	Colobus_angolensis_palliatus
ENSMOCG00000000257	Ddx1	100	99.730	ENSCGRG00001013025	Ddx1	100	99.730	Cricetulus_griseus_chok1gshd
ENSMOCG00000000257	Ddx1	100	99.730	ENSCGRG00000000676	Ddx1	100	99.730	Cricetulus_griseus_crigri
ENSMOCG00000000257	Ddx1	99	84.196	ENSCSEG00000002630	ddx1	100	84.196	Cynoglossus_semilaevis
ENSMOCG00000000257	Ddx1	99	83.787	ENSCVAG00000020927	ddx1	100	83.787	Cyprinodon_variegatus
ENSMOCG00000000257	Ddx1	100	84.189	ENSDARG00000032117	ddx1	100	84.196	Danio_rerio
ENSMOCG00000000257	Ddx1	100	97.432	ENSDNOG00000006905	DDX1	100	97.432	Dasypus_novemcinctus
ENSMOCG00000000257	Ddx1	100	98.649	ENSDORG00000012847	Ddx1	100	98.649	Dipodomys_ordii
ENSMOCG00000000257	Ddx1	98	59.234	FBgn0015075	Ddx1	99	59.781	Drosophila_melanogaster
ENSMOCG00000000257	Ddx1	100	86.757	ENSETEG00000014259	DDX1	100	86.757	Echinops_telfairi
ENSMOCG00000000257	Ddx1	64	77.966	ENSEBUG00000009800	-	99	77.966	Eptatretus_burgeri
ENSMOCG00000000257	Ddx1	100	97.568	ENSEASG00005009335	DDX1	92	97.568	Equus_asinus_asinus
ENSMOCG00000000257	Ddx1	94	97.561	ENSECAG00000016396	DDX1	100	97.561	Equus_caballus
ENSMOCG00000000257	Ddx1	89	94.350	ENSEEUG00000001606	DDX1	89	94.350	Erinaceus_europaeus
ENSMOCG00000000257	Ddx1	100	82.186	ENSELUG00000006743	ddx1	100	82.186	Esox_lucius
ENSMOCG00000000257	Ddx1	100	98.243	ENSFCAG00000004680	DDX1	100	98.243	Felis_catus
ENSMOCG00000000257	Ddx1	100	92.297	ENSFALG00000008696	DDX1	100	92.297	Ficedula_albicollis
ENSMOCG00000000257	Ddx1	100	97.027	ENSFDAG00000021305	DDX1	100	97.027	Fukomys_damarensis
ENSMOCG00000000257	Ddx1	100	82.703	ENSFHEG00000008444	ddx1	100	82.703	Fundulus_heteroclitus
ENSMOCG00000000257	Ddx1	100	81.157	ENSGMOG00000011300	ddx1	100	81.157	Gadus_morhua
ENSMOCG00000000257	Ddx1	100	93.649	ENSGALG00000016461	DDX1	100	93.649	Gallus_gallus
ENSMOCG00000000257	Ddx1	100	83.514	ENSGAFG00000004706	ddx1	100	83.514	Gambusia_affinis
ENSMOCG00000000257	Ddx1	100	82.027	ENSGACG00000011162	ddx1	100	82.027	Gasterosteus_aculeatus
ENSMOCG00000000257	Ddx1	100	93.514	ENSGAGG00000021020	DDX1	100	93.514	Gopherus_agassizii
ENSMOCG00000000257	Ddx1	100	97.703	ENSGGOG00000012482	DDX1	100	97.703	Gorilla_gorilla
ENSMOCG00000000257	Ddx1	100	84.324	ENSHBUG00000014069	ddx1	100	84.324	Haplochromis_burtoni
ENSMOCG00000000257	Ddx1	100	97.432	ENSHGLG00000000801	DDX1	100	97.432	Heterocephalus_glaber_female
ENSMOCG00000000257	Ddx1	99	97.411	ENSHGLG00100000711	DDX1	100	97.411	Heterocephalus_glaber_male
ENSMOCG00000000257	Ddx1	100	83.784	ENSHCOG00000011492	ddx1	96	83.784	Hippocampus_comes
ENSMOCG00000000257	Ddx1	100	83.108	ENSIPUG00000003494	ddx1	100	83.108	Ictalurus_punctatus
ENSMOCG00000000257	Ddx1	99	98.638	ENSSTOG00000003977	DDX1	100	98.638	Ictidomys_tridecemlineatus
ENSMOCG00000000257	Ddx1	89	94.198	ENSJJAG00000013315	Ddx1	100	94.198	Jaculus_jaculus
ENSMOCG00000000257	Ddx1	100	85.405	ENSKMAG00000011340	ddx1	100	85.405	Kryptolebias_marmoratus
ENSMOCG00000000257	Ddx1	88	78.626	ENSLBEG00000008692	ddx1	99	78.626	Labrus_bergylta
ENSMOCG00000000257	Ddx1	100	87.432	ENSLACG00000010529	DDX1	100	87.432	Latimeria_chalumnae
ENSMOCG00000000257	Ddx1	100	86.595	ENSLOCG00000016473	ddx1	100	86.595	Lepisosteus_oculatus
ENSMOCG00000000257	Ddx1	99	97.286	ENSLAFG00000002213	DDX1	99	97.286	Loxodonta_africana
ENSMOCG00000000257	Ddx1	100	97.838	ENSMFAG00000033987	DDX1	100	97.838	Macaca_fascicularis
ENSMOCG00000000257	Ddx1	100	97.838	ENSMMUG00000023437	DDX1	100	97.838	Macaca_mulatta
ENSMOCG00000000257	Ddx1	100	97.838	ENSMNEG00000029189	DDX1	100	97.838	Macaca_nemestrina
ENSMOCG00000000257	Ddx1	100	97.703	ENSMLEG00000030787	DDX1	100	97.703	Mandrillus_leucophaeus
ENSMOCG00000000257	Ddx1	100	84.595	ENSMAMG00000015916	ddx1	100	84.595	Mastacembelus_armatus
ENSMOCG00000000257	Ddx1	99	84.490	ENSMZEG00005015207	ddx1	99	83.486	Maylandia_zebra
ENSMOCG00000000257	Ddx1	99	89.431	ENSMGAG00000014025	DDX1	100	89.431	Meleagris_gallopavo
ENSMOCG00000000257	Ddx1	64	98.182	ENSMAUG00000016156	Ddx1	100	98.182	Mesocricetus_auratus
ENSMOCG00000000257	Ddx1	100	97.838	ENSMICG00000001023	DDX1	100	97.838	Microcebus_murinus
ENSMOCG00000000257	Ddx1	89	82.622	ENSMMOG00000015397	ddx1	99	82.622	Mola_mola
ENSMOCG00000000257	Ddx1	99	94.966	ENSMODG00000010275	DDX1	99	94.966	Monodelphis_domestica
ENSMOCG00000000257	Ddx1	100	84.054	ENSMALG00000016409	ddx1	100	84.054	Monopterus_albus
ENSMOCG00000000257	Ddx1	100	99.865	MGP_CAROLIEiJ_G0017622	Ddx1	100	99.865	Mus_caroli
ENSMOCG00000000257	Ddx1	100	99.189	ENSMUSG00000037149	Ddx1	100	99.474	Mus_musculus
ENSMOCG00000000257	Ddx1	100	99.595	MGP_PahariEiJ_G0029378	Ddx1	100	99.595	Mus_pahari
ENSMOCG00000000257	Ddx1	100	99.189	MGP_SPRETEiJ_G0018464	Ddx1	100	99.189	Mus_spretus
ENSMOCG00000000257	Ddx1	100	98.108	ENSMPUG00000013606	DDX1	100	98.108	Mustela_putorius_furo
ENSMOCG00000000257	Ddx1	99	97.011	ENSMLUG00000003027	DDX1	98	97.011	Myotis_lucifugus
ENSMOCG00000000257	Ddx1	99	99.319	ENSNGAG00000015783	Ddx1	100	99.319	Nannospalax_galili
ENSMOCG00000000257	Ddx1	78	79.931	ENSNBRG00000020677	ddx1	94	79.931	Neolamprologus_brichardi
ENSMOCG00000000257	Ddx1	100	97.838	ENSNLEG00000014417	DDX1	100	97.838	Nomascus_leucogenys
ENSMOCG00000000257	Ddx1	99	92.750	ENSMEUG00000008254	DDX1	99	92.750	Notamacropus_eugenii
ENSMOCG00000000257	Ddx1	92	83.051	ENSOPRG00000004290	DDX1	100	69.595	Ochotona_princeps
ENSMOCG00000000257	Ddx1	100	97.162	ENSODEG00000000569	DDX1	100	97.162	Octodon_degus
ENSMOCG00000000257	Ddx1	100	85.020	ENSONIG00000000513	ddx1	100	85.020	Oreochromis_niloticus
ENSMOCG00000000257	Ddx1	75	91.935	ENSOANG00000005450	DDX1	99	91.935	Ornithorhynchus_anatinus
ENSMOCG00000000257	Ddx1	100	98.108	ENSOCUG00000007010	DDX1	100	98.108	Oryctolagus_cuniculus
ENSMOCG00000000257	Ddx1	100	84.459	ENSORLG00000016709	ddx1	100	84.459	Oryzias_latipes
ENSMOCG00000000257	Ddx1	99	84.196	ENSORLG00020003290	ddx1	100	84.196	Oryzias_latipes_hni
ENSMOCG00000000257	Ddx1	100	84.054	ENSORLG00015022438	ddx1	100	84.054	Oryzias_latipes_hsok
ENSMOCG00000000257	Ddx1	100	79.595	ENSOMEG00000017620	ddx1	100	78.108	Oryzias_melastigma
ENSMOCG00000000257	Ddx1	99	97.690	ENSOGAG00000008730	DDX1	100	97.690	Otolemur_garnettii
ENSMOCG00000000257	Ddx1	99	96.875	ENSOARG00000016369	DDX1	100	96.875	Ovis_aries
ENSMOCG00000000257	Ddx1	100	97.568	ENSPPAG00000027432	DDX1	100	97.568	Pan_paniscus
ENSMOCG00000000257	Ddx1	100	98.243	ENSPPRG00000020556	DDX1	100	98.243	Panthera_pardus
ENSMOCG00000000257	Ddx1	100	98.108	ENSPTIG00000008267	DDX1	100	98.108	Panthera_tigris_altaica
ENSMOCG00000000257	Ddx1	100	97.568	ENSPTRG00000011670	DDX1	100	97.568	Pan_troglodytes
ENSMOCG00000000257	Ddx1	100	97.973	ENSPANG00000025185	DDX1	100	97.973	Papio_anubis
ENSMOCG00000000257	Ddx1	100	83.784	ENSPKIG00000012466	ddx1	100	83.924	Paramormyrops_kingsleyae
ENSMOCG00000000257	Ddx1	54	90.571	ENSPSIG00000012292	DDX1	100	90.571	Pelodiscus_sinensis
ENSMOCG00000000257	Ddx1	100	81.757	ENSPMGG00000000782	ddx1	100	80.270	Periophthalmus_magnuspinnatus
ENSMOCG00000000257	Ddx1	100	98.649	ENSPEMG00000016389	Ddx1	100	98.649	Peromyscus_maniculatus_bairdii
ENSMOCG00000000257	Ddx1	99	79.212	ENSPMAG00000009118	-	100	79.212	Petromyzon_marinus
ENSMOCG00000000257	Ddx1	100	95.405	ENSPCIG00000010941	DDX1	100	95.405	Phascolarctos_cinereus
ENSMOCG00000000257	Ddx1	100	83.649	ENSPFOG00000011921	ddx1	100	83.649	Poecilia_formosa
ENSMOCG00000000257	Ddx1	86	82.115	ENSPFOG00000006873	-	100	82.115	Poecilia_formosa
ENSMOCG00000000257	Ddx1	100	83.378	ENSPLAG00000005939	ddx1	100	83.378	Poecilia_latipinna
ENSMOCG00000000257	Ddx1	100	83.919	ENSPMEG00000011140	ddx1	100	83.919	Poecilia_mexicana
ENSMOCG00000000257	Ddx1	100	83.514	ENSPREG00000011751	ddx1	100	83.514	Poecilia_reticulata
ENSMOCG00000000257	Ddx1	100	97.703	ENSPPYG00000012638	DDX1	100	97.703	Pongo_abelii
ENSMOCG00000000257	Ddx1	100	83.919	ENSPCAG00000001491	DDX1	100	83.919	Procavia_capensis
ENSMOCG00000000257	Ddx1	99	95.504	ENSPCOG00000028185	DDX1	99	95.504	Propithecus_coquereli
ENSMOCG00000000257	Ddx1	100	97.838	ENSPVAG00000013618	DDX1	100	97.838	Pteropus_vampyrus
ENSMOCG00000000257	Ddx1	100	84.324	ENSPNYG00000013839	ddx1	100	84.324	Pundamilia_nyererei
ENSMOCG00000000257	Ddx1	89	83.359	ENSPNAG00000017033	ddx1	97	83.359	Pygocentrus_nattereri
ENSMOCG00000000257	Ddx1	100	99.189	ENSRNOG00000006652	Ddx1	100	99.189	Rattus_norvegicus
ENSMOCG00000000257	Ddx1	100	96.486	ENSRBIG00000041664	DDX1	100	96.800	Rhinopithecus_bieti
ENSMOCG00000000257	Ddx1	100	97.297	ENSRROG00000031167	DDX1	100	97.297	Rhinopithecus_roxellana
ENSMOCG00000000257	Ddx1	100	98.108	ENSSBOG00000027577	DDX1	100	98.108	Saimiri_boliviensis_boliviensis
ENSMOCG00000000257	Ddx1	99	87.211	ENSSHAG00000009363	DDX1	99	87.211	Sarcophilus_harrisii
ENSMOCG00000000257	Ddx1	100	83.243	ENSSFOG00015014476	ddx1	100	83.243	Scleropages_formosus
ENSMOCG00000000257	Ddx1	100	82.703	ENSSMAG00000010094	ddx1	100	82.703	Scophthalmus_maximus
ENSMOCG00000000257	Ddx1	100	84.189	ENSSDUG00000012334	ddx1	100	84.189	Seriola_dumerili
ENSMOCG00000000257	Ddx1	100	83.784	ENSSLDG00000025345	ddx1	100	83.784	Seriola_lalandi_dorsalis
ENSMOCG00000000257	Ddx1	99	86.785	ENSSARG00000004536	DDX1	100	86.785	Sorex_araneus
ENSMOCG00000000257	Ddx1	100	90.811	ENSSPUG00000018835	DDX1	100	90.811	Sphenodon_punctatus
ENSMOCG00000000257	Ddx1	100	79.595	ENSSPAG00000023554	ddx1	100	79.595	Stegastes_partitus
ENSMOCG00000000257	Ddx1	100	97.162	ENSSSCG00000008619	DDX1	100	97.162	Sus_scrofa
ENSMOCG00000000257	Ddx1	100	92.297	ENSTGUG00000013096	DDX1	100	92.297	Taeniopygia_guttata
ENSMOCG00000000257	Ddx1	99	83.469	ENSTRUG00000015765	ddx1	99	83.469	Takifugu_rubripes
ENSMOCG00000000257	Ddx1	100	83.919	ENSTNIG00000016309	ddx1	100	83.919	Tetraodon_nigroviridis
ENSMOCG00000000257	Ddx1	99	94.414	ENSTBEG00000008454	DDX1	100	94.414	Tupaia_belangeri
ENSMOCG00000000257	Ddx1	100	96.486	ENSTTRG00000005081	DDX1	100	96.486	Tursiops_truncatus
ENSMOCG00000000257	Ddx1	71	84.877	ENSUAMG00000017375	DDX1	93	84.717	Ursus_americanus
ENSMOCG00000000257	Ddx1	99	98.093	ENSUMAG00000023450	DDX1	100	98.093	Ursus_maritimus
ENSMOCG00000000257	Ddx1	85	97.862	ENSVPAG00000007764	DDX1	85	97.862	Vicugna_pacos
ENSMOCG00000000257	Ddx1	99	97.823	ENSVVUG00000013085	DDX1	96	97.823	Vulpes_vulpes
ENSMOCG00000000257	Ddx1	100	90.405	ENSXETG00000017825	ddx1	100	90.405	Xenopus_tropicalis
ENSMOCG00000000257	Ddx1	100	80.857	ENSXCOG00000007082	ddx1	100	80.857	Xiphophorus_couchianus
ENSMOCG00000000257	Ddx1	100	83.378	ENSXMAG00000004555	ddx1	100	83.378	Xiphophorus_maculatus