EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000000405 (Gene tree)
Gene ID: 101999453
Gene Symbol: Rbm42
Alias: 1700003D06Rik|3100004P22Rik
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 10208 bases
Position: chrLG4:21926109-21936316
Accession: 101999453
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000000509	RRM_1	PF00076.22	5.6e-18	1	1
ENSMOCP00000000506	RRM_1	PF00076.22	6.1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000000534	-	1711	XM_005361223	ENSMOCP00000000506	478 (aa)	XP_005361280	-
ENSMOCT00000000537	-	1524	XM_005361224	ENSMOCP00000000509	449 (aa)	XP_005361281	-

Gene Model

Click here to download ENSMOCG00000000405's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000000405's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000000405	Rbm42	99	96.458	ENSG00000126254	RBM42	100	100.000	Homo_sapiens
ENSMOCG00000000405	Rbm42	99	96.868	ENSAMEG00000000524	RBM42	100	96.868	Ailuropoda_melanoleuca
ENSMOCG00000000405	Rbm42	99	96.436	ENSANAG00000027537	RBM42	100	100.000	Aotus_nancymaae
ENSMOCG00000000405	Rbm42	99	96.226	ENSBTAG00000013440	RBM42	100	96.226	Bos_taurus
ENSMOCG00000000405	Rbm42	99	96.875	ENSCJAG00000010220	RBM42	100	100.000	Callithrix_jacchus
ENSMOCG00000000405	Rbm42	99	90.566	ENSCAFG00020018628	RBM42	96	100.000	Canis_lupus_dingo
ENSMOCG00000000405	Rbm42	99	96.205	ENSCHIG00000009518	RBM42	100	96.205	Capra_hircus
ENSMOCG00000000405	Rbm42	99	97.071	ENSTSYG00000014688	RBM42	100	100.000	Carlito_syrichta
ENSMOCG00000000405	Rbm42	81	97.150	ENSCAPG00000009566	RBM42	99	97.150	Cavia_aperea
ENSMOCG00000000405	Rbm42	100	96.018	ENSCPOG00000012365	RBM42	100	96.018	Cavia_porcellus
ENSMOCG00000000405	Rbm42	99	97.065	ENSCCAG00000034440	RBM42	100	100.000	Cebus_capucinus
ENSMOCG00000000405	Rbm42	99	96.429	ENSCATG00000041924	RBM42	100	100.000	Cercocebus_atys
ENSMOCG00000000405	Rbm42	100	96.460	ENSCLAG00000012865	RBM42	100	96.460	Chinchilla_lanigera
ENSMOCG00000000405	Rbm42	99	96.009	ENSCSAG00000004422	RBM42	100	96.009	Chlorocebus_sabaeus
ENSMOCG00000000405	Rbm42	99	87.553	ENSCANG00000030272	RBM42	100	87.553	Colobus_angolensis_palliatus
ENSMOCG00000000405	Rbm42	100	98.954	ENSCGRG00001018540	Rbm42	100	98.954	Cricetulus_griseus_chok1gshd
ENSMOCG00000000405	Rbm42	99	95.625	ENSDNOG00000037397	RBM42	100	95.625	Dasypus_novemcinctus
ENSMOCG00000000405	Rbm42	100	96.882	ENSDORG00000013001	Rbm42	100	96.882	Dipodomys_ordii
ENSMOCG00000000405	Rbm42	75	89.394	ENSETEG00000007878	RBM42	73	89.394	Echinops_telfairi
ENSMOCG00000000405	Rbm42	99	97.528	ENSEASG00005001074	RBM42	100	97.528	Equus_asinus_asinus
ENSMOCG00000000405	Rbm42	99	97.528	ENSECAG00000018215	RBM42	100	97.528	Equus_caballus
ENSMOCG00000000405	Rbm42	99	97.694	ENSFCAG00000006376	RBM42	100	100.000	Felis_catus
ENSMOCG00000000405	Rbm42	100	96.009	ENSFDAG00000007440	RBM42	100	96.009	Fukomys_damarensis
ENSMOCG00000000405	Rbm42	99	96.639	ENSGGOG00000009972	RBM42	100	100.000	Gorilla_gorilla
ENSMOCG00000000405	Rbm42	97	95.413	ENSHGLG00000008418	RBM42	100	95.323	Heterocephalus_glaber_female
ENSMOCG00000000405	Rbm42	97	95.413	ENSHGLG00100018667	RBM42	100	95.323	Heterocephalus_glaber_male
ENSMOCG00000000405	Rbm42	100	96.903	ENSSTOG00000013050	RBM42	100	96.903	Ictidomys_tridecemlineatus
ENSMOCG00000000405	Rbm42	100	96.659	ENSJJAG00000010421	Rbm42	100	96.659	Jaculus_jaculus
ENSMOCG00000000405	Rbm42	97	89.722	ENSLAFG00000014993	RBM42	100	91.042	Loxodonta_africana
ENSMOCG00000000405	Rbm42	99	96.429	ENSMFAG00000002758	RBM42	100	100.000	Macaca_fascicularis
ENSMOCG00000000405	Rbm42	99	96.250	ENSMMUG00000018954	RBM42	100	100.000	Macaca_mulatta
ENSMOCG00000000405	Rbm42	99	96.250	ENSMNEG00000030009	RBM42	100	100.000	Macaca_nemestrina
ENSMOCG00000000405	Rbm42	99	96.429	ENSMLEG00000036119	RBM42	100	100.000	Mandrillus_leucophaeus
ENSMOCG00000000405	Rbm42	99	97.484	ENSMICG00000009880	RBM42	100	100.000	Microcebus_murinus
ENSMOCG00000000405	Rbm42	99	98.113	MGP_CAROLIEiJ_G0029536	Rbm42	99	98.113	Mus_caroli
ENSMOCG00000000405	Rbm42	99	98.113	ENSMUSG00000036733	Rbm42	99	98.113	Mus_musculus
ENSMOCG00000000405	Rbm42	99	98.532	MGP_PahariEiJ_G0012770	Rbm42	99	98.532	Mus_pahari
ENSMOCG00000000405	Rbm42	99	98.113	MGP_SPRETEiJ_G0030632	Rbm42	99	98.113	Mus_spretus
ENSMOCG00000000405	Rbm42	99	97.321	ENSMPUG00000006288	RBM42	100	97.321	Mustela_putorius_furo
ENSMOCG00000000405	Rbm42	99	96.017	ENSMLUG00000011334	RBM42	100	96.017	Myotis_lucifugus
ENSMOCG00000000405	Rbm42	100	96.653	ENSNGAG00000019698	Rbm42	100	96.653	Nannospalax_galili
ENSMOCG00000000405	Rbm42	70	97.605	ENSNLEG00000011272	-	94	90.782	Nomascus_leucogenys
ENSMOCG00000000405	Rbm42	95	83.660	ENSMEUG00000016300	RBM42	100	84.728	Notamacropus_eugenii
ENSMOCG00000000405	Rbm42	99	92.662	ENSOPRG00000001229	RBM42	100	90.776	Ochotona_princeps
ENSMOCG00000000405	Rbm42	100	95.796	ENSODEG00000013705	RBM42	99	95.833	Octodon_degus
ENSMOCG00000000405	Rbm42	99	95.565	ENSOCUG00000003337	RBM42	100	95.565	Oryctolagus_cuniculus
ENSMOCG00000000405	Rbm42	99	95.807	ENSOGAG00000004144	RBM42	100	95.807	Otolemur_garnettii
ENSMOCG00000000405	Rbm42	97	88.437	ENSOARG00000004926	RBM42	99	91.667	Ovis_aries
ENSMOCG00000000405	Rbm42	99	96.855	ENSPPAG00000037315	RBM42	100	100.000	Pan_paniscus
ENSMOCG00000000405	Rbm42	99	97.694	ENSPPRG00000016784	RBM42	100	100.000	Panthera_pardus
ENSMOCG00000000405	Rbm42	99	97.275	ENSPTIG00000019270	RBM42	100	100.000	Panthera_tigris_altaica
ENSMOCG00000000405	Rbm42	99	96.639	ENSPTRG00000010852	RBM42	100	100.000	Pan_troglodytes
ENSMOCG00000000405	Rbm42	99	96.624	ENSPANG00000017032	RBM42	100	100.000	Papio_anubis
ENSMOCG00000000405	Rbm42	100	98.745	ENSPEMG00000012065	Rbm42	100	98.745	Peromyscus_maniculatus_bairdii
ENSMOCG00000000405	Rbm42	99	95.464	ENSPPYG00000009871	RBM42	100	95.464	Pongo_abelii
ENSMOCG00000000405	Rbm42	88	95.082	ENSPCAG00000013053	RBM42	100	81.132	Procavia_capensis
ENSMOCG00000000405	Rbm42	99	97.694	ENSPCOG00000026433	-	100	100.000	Propithecus_coquereli
ENSMOCG00000000405	Rbm42	70	98.498	ENSPCOG00000020672	RBM42	81	98.498	Propithecus_coquereli
ENSMOCG00000000405	Rbm42	99	97.065	ENSPVAG00000012815	RBM42	100	97.065	Pteropus_vampyrus
ENSMOCG00000000405	Rbm42	99	98.323	ENSRNOG00000024278	Rbm42	99	98.323	Rattus_norvegicus
ENSMOCG00000000405	Rbm42	99	96.429	ENSRBIG00000007566	RBM42	100	100.000	Rhinopithecus_bieti
ENSMOCG00000000405	Rbm42	99	96.855	ENSRROG00000042313	RBM42	100	100.000	Rhinopithecus_roxellana
ENSMOCG00000000405	Rbm42	85	98.030	ENSSBOG00000030666	RBM42	100	98.030	Saimiri_boliviensis_boliviensis
ENSMOCG00000000405	Rbm42	99	86.458	ENSSARG00000010724	RBM42	100	86.458	Sorex_araneus
ENSMOCG00000000405	Rbm42	99	95.759	ENSSSCG00000002905	RBM42	100	95.759	Sus_scrofa
ENSMOCG00000000405	Rbm42	99	97.065	ENSUAMG00000020711	RBM42	100	97.065	Ursus_americanus
ENSMOCG00000000405	Rbm42	99	97.065	ENSUMAG00000020223	RBM42	100	97.065	Ursus_maritimus
ENSMOCG00000000405	Rbm42	99	96.652	ENSVVUG00000015117	RBM42	100	96.652	Vulpes_vulpes