EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000000455 (Gene tree)
Gene ID: 101992915
Gene Symbol: Sf3b1
Alias: 2810001M05Rik|Prp10|SAP155|SF3b155|Targ4
Full Name: splicing factor 3b subunit 1
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 33232 bases
Position: chrJH996438.1:3859896-3893127
Accession: 101992915
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000000588	SF3b1	PF08920.10	3.7e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000000616	-	3789	XM_013353464	ENSMOCP00000000588	1262 (aa)	XP_013208918	-

Gene Model

Click here to download ENSMOCG00000000455's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000000455's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000000455	Sf3b1	99	95.525	ENSG00000115524	SF3B1	99	95.525	Homo_sapiens
ENSMOCG00000000455	Sf3b1	99	89.433	ENSAPOG00000011894	sf3b1	99	89.305	Acanthochromis_polyacanthus
ENSMOCG00000000455	Sf3b1	99	95.525	ENSAMEG00000013809	SF3B1	99	95.525	Ailuropoda_melanoleuca
ENSMOCG00000000455	Sf3b1	99	88.727	ENSACIG00000020910	sf3b1	96	88.727	Amphilophus_citrinellus
ENSMOCG00000000455	Sf3b1	99	89.305	ENSAOCG00000004478	sf3b1	99	89.305	Amphiprion_ocellaris
ENSMOCG00000000455	Sf3b1	99	89.305	ENSAPEG00000012937	sf3b1	99	89.305	Amphiprion_percula
ENSMOCG00000000455	Sf3b1	99	89.425	ENSATEG00000020435	sf3b1	99	89.425	Anabas_testudineus
ENSMOCG00000000455	Sf3b1	100	94.773	ENSAPLG00000003993	SF3B1	99	94.773	Anas_platyrhynchos
ENSMOCG00000000455	Sf3b1	99	94.444	ENSACAG00000009612	SF3B1	99	94.444	Anolis_carolinensis
ENSMOCG00000000455	Sf3b1	100	95.311	ENSANAG00000021577	SF3B1	100	95.078	Aotus_nancymaae
ENSMOCG00000000455	Sf3b1	99	88.379	ENSACLG00000023470	sf3b1	99	88.379	Astatotilapia_calliptera
ENSMOCG00000000455	Sf3b1	99	89.679	ENSAMXG00000002219	sf3b1	99	89.679	Astyanax_mexicanus
ENSMOCG00000000455	Sf3b1	99	95.448	ENSBTAG00000008915	SF3B1	99	95.448	Bos_taurus
ENSMOCG00000000455	Sf3b1	98	62.792	WBGene00011605	sftb-1	98	62.896	Caenorhabditis_elegans
ENSMOCG00000000455	Sf3b1	99	95.525	ENSCJAG00000003902	SF3B1	99	95.525	Callithrix_jacchus
ENSMOCG00000000455	Sf3b1	99	95.525	ENSCAFG00000010826	SF3B1	99	95.525	Canis_familiaris
ENSMOCG00000000455	Sf3b1	99	95.525	ENSCAFG00020004750	SF3B1	99	95.525	Canis_lupus_dingo
ENSMOCG00000000455	Sf3b1	99	95.448	ENSCHIG00000015226	SF3B1	99	95.448	Capra_hircus
ENSMOCG00000000455	Sf3b1	99	95.521	ENSTSYG00000009214	SF3B1	99	95.521	Carlito_syrichta
ENSMOCG00000000455	Sf3b1	99	95.598	ENSCAPG00000006547	SF3B1	99	95.598	Cavia_aperea
ENSMOCG00000000455	Sf3b1	99	95.598	ENSCPOG00000009353	SF3B1	100	95.595	Cavia_porcellus
ENSMOCG00000000455	Sf3b1	99	95.525	ENSCCAG00000020506	SF3B1	99	95.525	Cebus_capucinus
ENSMOCG00000000455	Sf3b1	99	95.525	ENSCATG00000035735	SF3B1	99	95.525	Cercocebus_atys
ENSMOCG00000000455	Sf3b1	100	95.158	ENSCLAG00000014767	SF3B1	99	95.158	Chinchilla_lanigera
ENSMOCG00000000455	Sf3b1	99	95.525	ENSCSAG00000011505	SF3B1	99	95.525	Chlorocebus_sabaeus
ENSMOCG00000000455	Sf3b1	75	96.491	ENSCHOG00000009860	SF3B1	75	96.429	Choloepus_hoffmanni
ENSMOCG00000000455	Sf3b1	99	94.753	ENSCPBG00000021902	SF3B1	99	94.753	Chrysemys_picta_bellii
ENSMOCG00000000455	Sf3b1	68	72.106	ENSCING00000002558	-	99	72.737	Ciona_intestinalis
ENSMOCG00000000455	Sf3b1	99	75.894	ENSCSAVG00000002559	-	99	75.495	Ciona_savignyi
ENSMOCG00000000455	Sf3b1	99	95.598	ENSCANG00000029415	SF3B1	99	95.598	Colobus_angolensis_palliatus
ENSMOCG00000000455	Sf3b1	99	95.595	ENSCGRG00001016990	Sf3b1	99	95.595	Cricetulus_griseus_chok1gshd
ENSMOCG00000000455	Sf3b1	99	95.595	ENSCGRG00000005301	Sf3b1	99	95.595	Cricetulus_griseus_crigri
ENSMOCG00000000455	Sf3b1	99	85.583	ENSCSEG00000003860	sf3b1	99	85.506	Cynoglossus_semilaevis
ENSMOCG00000000455	Sf3b1	95	89.181	ENSCVAG00000003680	sf3b1	99	89.181	Cyprinodon_variegatus
ENSMOCG00000000455	Sf3b1	99	89.297	ENSDARG00000056138	sf3b1	99	89.297	Danio_rerio
ENSMOCG00000000455	Sf3b1	99	95.451	ENSDNOG00000011754	SF3B1	99	95.451	Dasypus_novemcinctus
ENSMOCG00000000455	Sf3b1	99	92.896	ENSDORG00000002399	Sf3b1	100	92.896	Dipodomys_ordii
ENSMOCG00000000455	Sf3b1	99	72.707	FBgn0031266	Sf3b1	99	72.707	Drosophila_melanogaster
ENSMOCG00000000455	Sf3b1	82	94.341	ENSETEG00000009188	SF3B1	100	94.341	Echinops_telfairi
ENSMOCG00000000455	Sf3b1	99	82.848	ENSEBUG00000004325	sf3b1	100	85.330	Eptatretus_burgeri
ENSMOCG00000000455	Sf3b1	99	95.448	ENSEASG00005020159	SF3B1	97	95.448	Equus_asinus_asinus
ENSMOCG00000000455	Sf3b1	99	95.448	ENSECAG00000021657	SF3B1	97	95.448	Equus_caballus
ENSMOCG00000000455	Sf3b1	80	100.000	ENSEEUG00000000836	SF3B1	72	100.000	Erinaceus_europaeus
ENSMOCG00000000455	Sf3b1	99	88.686	ENSELUG00000005977	sf3b1	98	88.686	Esox_lucius
ENSMOCG00000000455	Sf3b1	99	95.525	ENSFCAG00000005038	SF3B1	99	95.525	Felis_catus
ENSMOCG00000000455	Sf3b1	99	94.765	ENSFALG00000004281	SF3B1	99	94.765	Ficedula_albicollis
ENSMOCG00000000455	Sf3b1	99	95.525	ENSFDAG00000017510	SF3B1	99	95.525	Fukomys_damarensis
ENSMOCG00000000455	Sf3b1	99	88.617	ENSFHEG00000014333	sf3b1	99	88.617	Fundulus_heteroclitus
ENSMOCG00000000455	Sf3b1	99	89.051	ENSGMOG00000006773	sf3b1	99	89.051	Gadus_morhua
ENSMOCG00000000455	Sf3b1	99	94.907	ENSGALG00000008038	SF3B1	99	94.907	Gallus_gallus
ENSMOCG00000000455	Sf3b1	99	89.198	ENSGAFG00000000704	sf3b1	99	89.198	Gambusia_affinis
ENSMOCG00000000455	Sf3b1	99	89.187	ENSGACG00000008839	sf3b1	99	89.187	Gasterosteus_aculeatus
ENSMOCG00000000455	Sf3b1	99	94.826	ENSGAGG00000017478	SF3B1	99	94.826	Gopherus_agassizii
ENSMOCG00000000455	Sf3b1	99	88.795	ENSGGOG00000009264	SF3B1	99	90.116	Gorilla_gorilla
ENSMOCG00000000455	Sf3b1	99	88.438	ENSHBUG00000007705	sf3b1	99	88.438	Haplochromis_burtoni
ENSMOCG00000000455	Sf3b1	100	95.234	ENSHGLG00000008285	-	99	95.234	Heterocephalus_glaber_female
ENSMOCG00000000455	Sf3b1	100	93.236	ENSHGLG00100005535	-	99	93.236	Heterocephalus_glaber_male
ENSMOCG00000000455	Sf3b1	99	88.669	ENSHCOG00000016775	sf3b1	99	88.669	Hippocampus_comes
ENSMOCG00000000455	Sf3b1	99	89.526	ENSIPUG00000013171	sf3b1	99	89.526	Ictalurus_punctatus
ENSMOCG00000000455	Sf3b1	99	95.525	ENSSTOG00000011034	SF3B1	99	95.525	Ictidomys_tridecemlineatus
ENSMOCG00000000455	Sf3b1	99	95.504	ENSJJAG00000010903	Sf3b1	99	95.504	Jaculus_jaculus
ENSMOCG00000000455	Sf3b1	99	88.643	ENSKMAG00000004009	sf3b1	99	88.643	Kryptolebias_marmoratus
ENSMOCG00000000455	Sf3b1	99	89.094	ENSLBEG00000022208	sf3b1	99	89.094	Labrus_bergylta
ENSMOCG00000000455	Sf3b1	99	88.276	ENSLACG00000014832	SF3B1	99	88.276	Latimeria_chalumnae
ENSMOCG00000000455	Sf3b1	99	90.458	ENSLOCG00000003899	sf3b1	99	90.458	Lepisosteus_oculatus
ENSMOCG00000000455	Sf3b1	99	95.525	ENSLAFG00000001956	SF3B1	99	95.525	Loxodonta_africana
ENSMOCG00000000455	Sf3b1	99	95.598	ENSMMUG00000022430	SF3B1	99	95.598	Macaca_mulatta
ENSMOCG00000000455	Sf3b1	99	95.595	ENSMNEG00000042333	SF3B1	100	95.078	Macaca_nemestrina
ENSMOCG00000000455	Sf3b1	95	88.889	ENSMLEG00000026141	SF3B1	99	89.427	Mandrillus_leucophaeus
ENSMOCG00000000455	Sf3b1	99	89.297	ENSMAMG00000010241	sf3b1	99	89.297	Mastacembelus_armatus
ENSMOCG00000000455	Sf3b1	99	88.379	ENSMZEG00005021254	sf3b1	99	88.379	Maylandia_zebra
ENSMOCG00000000455	Sf3b1	99	94.363	ENSMGAG00000007017	SF3B1	99	94.363	Meleagris_gallopavo
ENSMOCG00000000455	Sf3b1	99	91.000	ENSMAUG00000009071	Sf3b1	99	91.000	Mesocricetus_auratus
ENSMOCG00000000455	Sf3b1	99	95.521	ENSMICG00000013879	SF3B1	99	95.521	Microcebus_murinus
ENSMOCG00000000455	Sf3b1	83	87.948	ENSMMOG00000000475	sf3b1	99	87.948	Mola_mola
ENSMOCG00000000455	Sf3b1	99	94.830	ENSMODG00000012275	SF3B1	99	94.830	Monodelphis_domestica
ENSMOCG00000000455	Sf3b1	99	89.220	ENSMALG00000017211	sf3b1	99	89.220	Monopterus_albus
ENSMOCG00000000455	Sf3b1	99	95.525	MGP_CAROLIEiJ_G0014141	Sf3b1	99	95.525	Mus_caroli
ENSMOCG00000000455	Sf3b1	99	95.525	ENSMUSG00000025982	Sf3b1	99	95.525	Mus_musculus
ENSMOCG00000000455	Sf3b1	99	95.525	MGP_SPRETEiJ_G0014947	Sf3b1	99	95.525	Mus_spretus
ENSMOCG00000000455	Sf3b1	99	95.525	ENSMPUG00000007799	SF3B1	99	95.525	Mustela_putorius_furo
ENSMOCG00000000455	Sf3b1	99	94.290	ENSMLUG00000000840	SF3B1	99	94.290	Myotis_lucifugus
ENSMOCG00000000455	Sf3b1	99	95.595	ENSNGAG00000021884	-	99	95.595	Nannospalax_galili
ENSMOCG00000000455	Sf3b1	99	84.598	ENSNBRG00000015816	sf3b1	99	84.598	Neolamprologus_brichardi
ENSMOCG00000000455	Sf3b1	99	95.595	ENSNLEG00000006861	SF3B1	99	95.595	Nomascus_leucogenys
ENSMOCG00000000455	Sf3b1	69	100.000	ENSMEUG00000015848	-	67	100.000	Notamacropus_eugenii
ENSMOCG00000000455	Sf3b1	99	83.565	ENSOPRG00000008596	SF3B1	99	83.565	Ochotona_princeps
ENSMOCG00000000455	Sf3b1	99	95.525	ENSODEG00000011153	-	99	95.525	Octodon_degus
ENSMOCG00000000455	Sf3b1	99	88.379	ENSONIG00000013758	sf3b1	99	88.379	Oreochromis_niloticus
ENSMOCG00000000455	Sf3b1	83	93.727	ENSOCUG00000012722	-	96	93.727	Oryctolagus_cuniculus
ENSMOCG00000000455	Sf3b1	99	89.067	ENSORLG00000020219	sf3b1	99	89.067	Oryzias_latipes
ENSMOCG00000000455	Sf3b1	99	89.067	ENSORLG00020001746	sf3b1	99	89.067	Oryzias_latipes_hni
ENSMOCG00000000455	Sf3b1	62	83.894	ENSORLG00015001759	sf3b1	97	83.894	Oryzias_latipes_hsok
ENSMOCG00000000455	Sf3b1	99	89.076	ENSOMEG00000019231	sf3b1	99	89.076	Oryzias_melastigma
ENSMOCG00000000455	Sf3b1	99	95.448	ENSOARG00000015374	SF3B1	99	95.448	Ovis_aries
ENSMOCG00000000455	Sf3b1	99	95.598	ENSPPAG00000035007	SF3B1	99	95.598	Pan_paniscus
ENSMOCG00000000455	Sf3b1	99	95.525	ENSPPRG00000009090	SF3B1	99	95.525	Panthera_pardus
ENSMOCG00000000455	Sf3b1	99	95.525	ENSPTIG00000021557	SF3B1	99	95.525	Panthera_tigris_altaica
ENSMOCG00000000455	Sf3b1	99	87.067	ENSPTRG00000012771	SF3B1	99	87.067	Pan_troglodytes
ENSMOCG00000000455	Sf3b1	99	95.525	ENSPANG00000013417	SF3B1	99	95.525	Papio_anubis
ENSMOCG00000000455	Sf3b1	99	90.644	ENSPKIG00000000784	sf3b1	99	90.644	Paramormyrops_kingsleyae
ENSMOCG00000000455	Sf3b1	99	93.586	ENSPSIG00000017222	SF3B1	98	93.586	Pelodiscus_sinensis
ENSMOCG00000000455	Sf3b1	90	89.059	ENSPMGG00000004330	sf3b1	98	89.059	Periophthalmus_magnuspinnatus
ENSMOCG00000000455	Sf3b1	99	95.598	ENSPEMG00000010699	Sf3b1	100	95.598	Peromyscus_maniculatus_bairdii
ENSMOCG00000000455	Sf3b1	99	85.791	ENSPMAG00000001311	sf3b1	99	85.943	Petromyzon_marinus
ENSMOCG00000000455	Sf3b1	99	94.753	ENSPCIG00000010642	SF3B1	99	94.753	Phascolarctos_cinereus
ENSMOCG00000000455	Sf3b1	99	89.008	ENSPFOG00000000073	sf3b1	99	89.008	Poecilia_formosa
ENSMOCG00000000455	Sf3b1	99	89.076	ENSPLAG00000002293	sf3b1	99	89.076	Poecilia_latipinna
ENSMOCG00000000455	Sf3b1	99	89.076	ENSPMEG00000000446	sf3b1	97	89.076	Poecilia_mexicana
ENSMOCG00000000455	Sf3b1	99	89.152	ENSPREG00000019652	sf3b1	99	89.152	Poecilia_reticulata
ENSMOCG00000000455	Sf3b1	99	93.613	ENSPPYG00000013044	SF3B1	96	93.613	Pongo_abelii
ENSMOCG00000000455	Sf3b1	99	95.370	ENSPCAG00000009292	SF3B1	99	95.370	Procavia_capensis
ENSMOCG00000000455	Sf3b1	99	95.448	ENSPCOG00000024074	SF3B1	99	95.448	Propithecus_coquereli
ENSMOCG00000000455	Sf3b1	99	95.525	ENSPVAG00000008302	SF3B1	99	95.525	Pteropus_vampyrus
ENSMOCG00000000455	Sf3b1	99	88.379	ENSPNYG00000014939	sf3b1	99	88.379	Pundamilia_nyererei
ENSMOCG00000000455	Sf3b1	99	89.679	ENSPNAG00000008288	sf3b1	99	89.679	Pygocentrus_nattereri
ENSMOCG00000000455	Sf3b1	99	95.525	ENSRNOG00000013516	Sf3b1	99	95.525	Rattus_norvegicus
ENSMOCG00000000455	Sf3b1	99	91.840	ENSRBIG00000026096	SF3B1	99	91.840	Rhinopithecus_bieti
ENSMOCG00000000455	Sf3b1	99	95.525	ENSRROG00000031308	SF3B1	99	95.525	Rhinopithecus_roxellana
ENSMOCG00000000455	Sf3b1	99	95.525	ENSSBOG00000020080	SF3B1	99	95.525	Saimiri_boliviensis_boliviensis
ENSMOCG00000000455	Sf3b1	99	94.830	ENSSHAG00000017564	SF3B1	99	94.830	Sarcophilus_harrisii
ENSMOCG00000000455	Sf3b1	99	90.451	ENSSFOG00015021535	sf3b1	99	90.451	Scleropages_formosus
ENSMOCG00000000455	Sf3b1	99	88.491	ENSSMAG00000013977	sf3b1	98	88.491	Scophthalmus_maximus
ENSMOCG00000000455	Sf3b1	99	89.067	ENSSDUG00000017422	sf3b1	99	89.067	Seriola_dumerili
ENSMOCG00000000455	Sf3b1	99	88.991	ENSSLDG00000019495	sf3b1	99	88.991	Seriola_lalandi_dorsalis
ENSMOCG00000000455	Sf3b1	77	100.000	ENSSARG00000007016	SF3B1	75	100.000	Sorex_araneus
ENSMOCG00000000455	Sf3b1	99	94.599	ENSSPUG00000000410	SF3B1	99	94.599	Sphenodon_punctatus
ENSMOCG00000000455	Sf3b1	99	89.373	ENSSPAG00000010451	sf3b1	98	89.373	Stegastes_partitus
ENSMOCG00000000455	Sf3b1	90	94.666	ENSSSCG00000016075	SF3B1	100	95.078	Sus_scrofa
ENSMOCG00000000455	Sf3b1	99	94.830	ENSTGUG00000010553	SF3B1	99	94.830	Taeniopygia_guttata
ENSMOCG00000000455	Sf3b1	99	88.991	ENSTRUG00000015534	sf3b1	99	88.991	Takifugu_rubripes
ENSMOCG00000000455	Sf3b1	87	99.231	ENSTBEG00000008714	SF3B1	92	99.231	Tupaia_belangeri
ENSMOCG00000000455	Sf3b1	90	93.207	ENSTTRG00000003414	SF3B1	88	93.207	Tursiops_truncatus
ENSMOCG00000000455	Sf3b1	99	81.348	ENSUAMG00000018506	SF3B1	99	99.190	Ursus_americanus
ENSMOCG00000000455	Sf3b1	99	95.525	ENSUMAG00000020945	SF3B1	99	95.525	Ursus_maritimus
ENSMOCG00000000455	Sf3b1	99	87.346	ENSVPAG00000005798	SF3B1	99	87.346	Vicugna_pacos
ENSMOCG00000000455	Sf3b1	99	95.525	ENSVVUG00000025948	SF3B1	94	95.525	Vulpes_vulpes
ENSMOCG00000000455	Sf3b1	99	92.664	ENSXETG00000013339	sf3b1	99	92.664	Xenopus_tropicalis
ENSMOCG00000000455	Sf3b1	99	85.736	ENSXCOG00000018086	sf3b1	99	85.637	Xiphophorus_couchianus
ENSMOCG00000000455	Sf3b1	99	89.076	ENSXMAG00000007369	sf3b1	99	89.319	Xiphophorus_maculatus