EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000000465 (Gene tree)
Gene ID: 101978949
Gene Symbol: Gfm1
Alias: D3Wsu133e
Full Name: G elongation factor mitochondrial 1
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 45407 bases
Position: chr1:113244093-113289499
Accession: 101978949
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000000589	GTP_EFTU	PF00009.27	5e-63	1	1
ENSMOCP00000000589	GTP_EFTU_D2	PF03144.25	4.8e-17	1	1
ENSMOCP00000000589	EFG_IV	PF03764.18	1.1e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000000617	-	2589	XM_005344082	ENSMOCP00000000589	751 (aa)	XP_005344139	UPI00038BD746

Gene Model

Click here to download ENSMOCG00000000465's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000000465's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000000465	Gfm1	60	34.416	ENSMOCG00000018569	-	61	34.416
ENSMOCG00000000465	Gfm1	92	34.431	ENSMOCG00000004402	-	91	34.568
ENSMOCG00000000465	Gfm1	64	37.584	ENSMOCG00000019641	-	75	37.584
ENSMOCG00000000465	Gfm1	73	38.926	ENSMOCG00000019369	-	73	38.926
ENSMOCG00000000465	Gfm1	56	33.493	ENSMOCG00000011627	Guf1	64	33.493
ENSMOCG00000000465	Gfm1	59	35.404	ENSMOCG00000019032	-	86	35.611

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000000465	Gfm1	98	92.255	ENSG00000168827	GFM1	100	98.333	Homo_sapiens
ENSMOCG00000000465	Gfm1	93	77.318	ENSAPOG00000016489	gfm1	99	77.318	Acanthochromis_polyacanthus
ENSMOCG00000000465	Gfm1	98	92.287	ENSAMEG00000013542	GFM1	100	91.910	Ailuropoda_melanoleuca
ENSMOCG00000000465	Gfm1	96	76.389	ENSACIG00000014465	gfm1	93	76.389	Amphilophus_citrinellus
ENSMOCG00000000465	Gfm1	99	78.284	ENSAOCG00000006023	gfm1	99	78.284	Amphiprion_ocellaris
ENSMOCG00000000465	Gfm1	99	78.284	ENSAPEG00000024499	gfm1	99	80.307	Amphiprion_percula
ENSMOCG00000000465	Gfm1	100	78.961	ENSATEG00000013789	gfm1	100	78.961	Anabas_testudineus
ENSMOCG00000000465	Gfm1	96	83.611	ENSAPLG00000005022	GFM1	99	83.611	Anas_platyrhynchos
ENSMOCG00000000465	Gfm1	97	84.022	ENSACAG00000006829	GFM1	98	84.022	Anolis_carolinensis
ENSMOCG00000000465	Gfm1	100	91.247	ENSANAG00000035983	GFM1	100	91.247	Aotus_nancymaae
ENSMOCG00000000465	Gfm1	96	82.337	ENSACLG00000016586	gfm1	99	81.163	Astatotilapia_calliptera
ENSMOCG00000000465	Gfm1	100	79.361	ENSAMXG00000013435	gfm1	98	80.297	Astyanax_mexicanus
ENSMOCG00000000465	Gfm1	100	93.625	ENSBTAG00000027795	GFM1	100	93.625	Bos_taurus
ENSMOCG00000000465	Gfm1	93	56.776	WBGene00009246	gfm-1	95	56.601	Caenorhabditis_elegans
ENSMOCG00000000465	Gfm1	100	91.489	ENSCJAG00000000363	GFM1	100	91.489	Callithrix_jacchus
ENSMOCG00000000465	Gfm1	98	92.818	ENSCAFG00000009006	GFM1	100	94.231	Canis_familiaris
ENSMOCG00000000465	Gfm1	98	93.234	ENSCAFG00020005878	GFM1	99	93.785	Canis_lupus_dingo
ENSMOCG00000000465	Gfm1	100	93.493	ENSCHIG00000015220	GFM1	100	93.493	Capra_hircus
ENSMOCG00000000465	Gfm1	100	92.563	ENSTSYG00000002013	GFM1	100	92.563	Carlito_syrichta
ENSMOCG00000000465	Gfm1	96	81.405	ENSCAPG00000005699	GFM1	98	81.405	Cavia_aperea
ENSMOCG00000000465	Gfm1	100	91.777	ENSCPOG00000001194	GFM1	100	91.777	Cavia_porcellus
ENSMOCG00000000465	Gfm1	100	91.379	ENSCCAG00000025561	GFM1	100	91.379	Cebus_capucinus
ENSMOCG00000000465	Gfm1	100	91.247	ENSCATG00000037622	GFM1	100	91.247	Cercocebus_atys
ENSMOCG00000000465	Gfm1	98	91.757	ENSCLAG00000002503	GFM1	99	91.299	Chinchilla_lanigera
ENSMOCG00000000465	Gfm1	100	91.247	ENSCSAG00000012162	GFM1	100	91.247	Chlorocebus_sabaeus
ENSMOCG00000000465	Gfm1	100	84.085	ENSCHOG00000004867	GFM1	100	84.085	Choloepus_hoffmanni
ENSMOCG00000000465	Gfm1	100	83.089	ENSCPBG00000018367	GFM1	99	83.089	Chrysemys_picta_bellii
ENSMOCG00000000465	Gfm1	99	57.368	ENSCING00000011960	-	99	57.368	Ciona_intestinalis
ENSMOCG00000000465	Gfm1	95	60.194	ENSCSAVG00000008514	-	99	60.194	Ciona_savignyi
ENSMOCG00000000465	Gfm1	98	92.255	ENSCANG00000031714	GFM1	100	91.512	Colobus_angolensis_palliatus
ENSMOCG00000000465	Gfm1	100	96.005	ENSCGRG00001022095	GFM1	100	96.005	Cricetulus_griseus_chok1gshd
ENSMOCG00000000465	Gfm1	100	96.005	ENSCGRG00000012043	GFM1	100	96.005	Cricetulus_griseus_crigri
ENSMOCG00000000465	Gfm1	96	77.437	ENSCSEG00000017088	gfm1	98	77.437	Cynoglossus_semilaevis
ENSMOCG00000000465	Gfm1	99	80.965	ENSCVAG00000004126	gfm1	99	81.831	Cyprinodon_variegatus
ENSMOCG00000000465	Gfm1	100	78.162	ENSDARG00000063624	gfm1	100	78.162	Danio_rerio
ENSMOCG00000000465	Gfm1	54	89.731	ENSDNOG00000016385	-	100	89.731	Dasypus_novemcinctus
ENSMOCG00000000465	Gfm1	100	90.160	ENSDORG00000014165	Gfm1	100	90.160	Dipodomys_ordii
ENSMOCG00000000465	Gfm1	97	65.800	FBgn0263133	mEFG1	98	65.800	Drosophila_melanogaster
ENSMOCG00000000465	Gfm1	98	82.051	ENSETEG00000019197	GFM1	100	81.746	Echinops_telfairi
ENSMOCG00000000465	Gfm1	90	66.172	ENSEBUG00000012794	gfm1	99	66.172	Eptatretus_burgeri
ENSMOCG00000000465	Gfm1	96	68.690	ENSEEUG00000000429	GFM1	99	68.690	Erinaceus_europaeus
ENSMOCG00000000465	Gfm1	100	77.896	ENSELUG00000014728	gfm1	100	77.896	Esox_lucius
ENSMOCG00000000465	Gfm1	98	93.505	ENSFCAG00000013291	GFM1	100	93.236	Felis_catus
ENSMOCG00000000465	Gfm1	90	83.704	ENSFALG00000007619	GFM1	100	83.704	Ficedula_albicollis
ENSMOCG00000000465	Gfm1	100	91.247	ENSFDAG00000016559	GFM1	100	91.247	Fukomys_damarensis
ENSMOCG00000000465	Gfm1	100	79.494	ENSFHEG00000006091	gfm1	100	79.494	Fundulus_heteroclitus
ENSMOCG00000000465	Gfm1	96	79.391	ENSGMOG00000010161	gfm1	99	79.391	Gadus_morhua
ENSMOCG00000000465	Gfm1	98	81.818	ENSGALG00000009634	GFM1	99	81.818	Gallus_gallus
ENSMOCG00000000465	Gfm1	100	80.027	ENSGAFG00000012527	gfm1	100	80.027	Gambusia_affinis
ENSMOCG00000000465	Gfm1	99	78.059	ENSGACG00000009864	gfm1	99	78.059	Gasterosteus_aculeatus
ENSMOCG00000000465	Gfm1	98	92.527	ENSGGOG00000003085	GFM1	100	91.777	Gorilla_gorilla
ENSMOCG00000000465	Gfm1	96	82.476	ENSHBUG00000002120	gfm1	96	82.476	Haplochromis_burtoni
ENSMOCG00000000465	Gfm1	98	91.881	ENSHGLG00000016855	GFM1	100	90.981	Heterocephalus_glaber_female
ENSMOCG00000000465	Gfm1	98	91.881	ENSHGLG00100013049	GFM1	100	90.981	Heterocephalus_glaber_male
ENSMOCG00000000465	Gfm1	99	78.284	ENSHCOG00000007638	gfm1	99	78.284	Hippocampus_comes
ENSMOCG00000000465	Gfm1	97	80.690	ENSIPUG00000005873	gfm1	100	78.961	Ictalurus_punctatus
ENSMOCG00000000465	Gfm1	98	91.192	ENSSTOG00000010150	GFM1	99	91.192	Ictidomys_tridecemlineatus
ENSMOCG00000000465	Gfm1	100	92.676	ENSJJAG00000016447	Gfm1	100	92.676	Jaculus_jaculus
ENSMOCG00000000465	Gfm1	100	77.763	ENSKMAG00000020768	gfm1	100	77.763	Kryptolebias_marmoratus
ENSMOCG00000000465	Gfm1	93	80.742	ENSLBEG00000021315	gfm1	100	80.742	Labrus_bergylta
ENSMOCG00000000465	Gfm1	100	79.101	ENSLACG00000012295	GFM1	100	79.101	Latimeria_chalumnae
ENSMOCG00000000465	Gfm1	96	76.389	ENSLOCG00000003778	gfm1	99	76.389	Lepisosteus_oculatus
ENSMOCG00000000465	Gfm1	99	89.257	ENSLAFG00000010945	GFM1	100	89.379	Loxodonta_africana
ENSMOCG00000000465	Gfm1	100	91.645	ENSMFAG00000035731	GFM1	100	91.645	Macaca_fascicularis
ENSMOCG00000000465	Gfm1	100	91.777	ENSMMUG00000004961	GFM1	100	91.777	Macaca_mulatta
ENSMOCG00000000465	Gfm1	100	91.379	ENSMNEG00000033245	GFM1	100	91.379	Macaca_nemestrina
ENSMOCG00000000465	Gfm1	96	90.759	ENSMLEG00000030908	GFM1	99	90.431	Mandrillus_leucophaeus
ENSMOCG00000000465	Gfm1	100	78.695	ENSMAMG00000011760	gfm1	100	78.695	Mastacembelus_armatus
ENSMOCG00000000465	Gfm1	96	82.476	ENSMZEG00005016639	gfm1	96	82.476	Maylandia_zebra
ENSMOCG00000000465	Gfm1	96	82.893	ENSMGAG00000010641	GFM1	97	82.893	Meleagris_gallopavo
ENSMOCG00000000465	Gfm1	100	96.138	ENSMAUG00000000611	Gfm1	100	96.138	Mesocricetus_auratus
ENSMOCG00000000465	Gfm1	98	93.071	ENSMICG00000049086	GFM1	100	92.308	Microcebus_murinus
ENSMOCG00000000465	Gfm1	96	80.529	ENSMMOG00000012538	gfm1	97	80.529	Mola_mola
ENSMOCG00000000465	Gfm1	100	86.152	ENSMODG00000015673	GFM1	100	86.152	Monodelphis_domestica
ENSMOCG00000000465	Gfm1	95	80.753	ENSMALG00000012508	gfm1	95	80.753	Monopterus_albus
ENSMOCG00000000465	Gfm1	100	94.940	MGP_CAROLIEiJ_G0025052	Gfm1	100	94.940	Mus_caroli
ENSMOCG00000000465	Gfm1	100	95.206	ENSMUSG00000027774	Gfm1	100	95.206	Mus_musculus
ENSMOCG00000000465	Gfm1	100	94.807	MGP_PahariEiJ_G0026495	Gfm1	100	94.807	Mus_pahari
ENSMOCG00000000465	Gfm1	100	95.206	MGP_SPRETEiJ_G0025994	Gfm1	100	95.206	Mus_spretus
ENSMOCG00000000465	Gfm1	100	91.645	ENSMPUG00000002859	GFM1	100	91.645	Mustela_putorius_furo
ENSMOCG00000000465	Gfm1	100	93.634	ENSMLUG00000000452	GFM1	100	93.634	Myotis_lucifugus
ENSMOCG00000000465	Gfm1	100	94.008	ENSNGAG00000012375	Gfm1	100	94.008	Nannospalax_galili
ENSMOCG00000000465	Gfm1	96	82.197	ENSNBRG00000004631	gfm1	99	82.197	Neolamprologus_brichardi
ENSMOCG00000000465	Gfm1	98	92.663	ENSNLEG00000004176	GFM1	100	91.910	Nomascus_leucogenys
ENSMOCG00000000465	Gfm1	91	79.795	ENSMEUG00000007784	GFM1	99	79.795	Notamacropus_eugenii
ENSMOCG00000000465	Gfm1	100	89.229	ENSOPRG00000009860	GFM1	100	89.229	Ochotona_princeps
ENSMOCG00000000465	Gfm1	98	92.693	ENSODEG00000004316	GFM1	100	91.777	Octodon_degus
ENSMOCG00000000465	Gfm1	96	82.476	ENSONIG00000003772	gfm1	96	82.476	Oreochromis_niloticus
ENSMOCG00000000465	Gfm1	98	93.505	ENSOCUG00000013561	GFM1	100	92.971	Oryctolagus_cuniculus
ENSMOCG00000000465	Gfm1	94	82.203	ENSORLG00000006487	gfm1	100	82.203	Oryzias_latipes
ENSMOCG00000000465	Gfm1	96	81.919	ENSORLG00020003362	gfm1	96	81.919	Oryzias_latipes_hni
ENSMOCG00000000465	Gfm1	96	81.502	ENSORLG00015005829	gfm1	96	81.502	Oryzias_latipes_hsok
ENSMOCG00000000465	Gfm1	96	82.754	ENSOMEG00000012894	gfm1	96	82.754	Oryzias_melastigma
ENSMOCG00000000465	Gfm1	100	92.175	ENSOGAG00000008298	GFM1	100	92.175	Otolemur_garnettii
ENSMOCG00000000465	Gfm1	96	93.260	ENSOARG00000002409	GFM1	100	93.260	Ovis_aries
ENSMOCG00000000465	Gfm1	98	92.527	ENSPPAG00000033881	GFM1	100	91.777	Pan_paniscus
ENSMOCG00000000465	Gfm1	98	93.369	ENSPPRG00000009281	GFM1	100	93.103	Panthera_pardus
ENSMOCG00000000465	Gfm1	98	93.234	ENSPTIG00000012416	GFM1	100	92.971	Panthera_tigris_altaica
ENSMOCG00000000465	Gfm1	98	92.527	ENSPTRG00000015570	GFM1	100	91.777	Pan_troglodytes
ENSMOCG00000000465	Gfm1	100	91.777	ENSPANG00000016512	GFM1	100	91.777	Papio_anubis
ENSMOCG00000000465	Gfm1	100	79.361	ENSPKIG00000004876	gfm1	100	79.361	Paramormyrops_kingsleyae
ENSMOCG00000000465	Gfm1	100	82.290	ENSPSIG00000012567	GFM1	99	82.290	Pelodiscus_sinensis
ENSMOCG00000000465	Gfm1	96	79.444	ENSPMGG00000014068	gfm1	99	79.444	Periophthalmus_magnuspinnatus
ENSMOCG00000000465	Gfm1	100	96.005	ENSPEMG00000008942	Gfm1	100	96.005	Peromyscus_maniculatus_bairdii
ENSMOCG00000000465	Gfm1	85	85.959	ENSPCIG00000020195	GFM1	98	85.959	Phascolarctos_cinereus
ENSMOCG00000000465	Gfm1	100	80.559	ENSPFOG00000011022	gfm1	100	80.559	Poecilia_formosa
ENSMOCG00000000465	Gfm1	96	82.754	ENSPLAG00000019585	gfm1	100	79.580	Poecilia_latipinna
ENSMOCG00000000465	Gfm1	100	80.426	ENSPMEG00000012376	gfm1	100	80.426	Poecilia_mexicana
ENSMOCG00000000465	Gfm1	100	80.027	ENSPREG00000001332	gfm1	95	80.027	Poecilia_reticulata
ENSMOCG00000000465	Gfm1	98	92.799	ENSPPYG00000014244	GFM1	100	92.042	Pongo_abelii
ENSMOCG00000000465	Gfm1	93	88.762	ENSPCAG00000008934	GFM1	100	88.762	Procavia_capensis
ENSMOCG00000000465	Gfm1	98	93.342	ENSPCOG00000022259	GFM1	100	92.706	Propithecus_coquereli
ENSMOCG00000000465	Gfm1	100	92.706	ENSPVAG00000013605	GFM1	100	92.706	Pteropus_vampyrus
ENSMOCG00000000465	Gfm1	96	82.197	ENSPNYG00000006037	gfm1	97	82.197	Pundamilia_nyererei
ENSMOCG00000000465	Gfm1	100	79.627	ENSPNAG00000001237	gfm1	100	79.627	Pygocentrus_nattereri
ENSMOCG00000000465	Gfm1	100	94.407	ENSRNOG00000012873	Gfm1	100	94.407	Rattus_norvegicus
ENSMOCG00000000465	Gfm1	98	92.120	ENSRBIG00000031363	GFM1	100	91.379	Rhinopithecus_bieti
ENSMOCG00000000465	Gfm1	98	92.255	ENSRROG00000031081	GFM1	100	91.512	Rhinopithecus_roxellana
ENSMOCG00000000465	Gfm1	92	56.547	YLR069C	-	90	56.547	Saccharomyces_cerevisiae
ENSMOCG00000000465	Gfm1	100	91.910	ENSSBOG00000023252	GFM1	100	91.910	Saimiri_boliviensis_boliviensis
ENSMOCG00000000465	Gfm1	99	86.997	ENSSHAG00000017772	GFM1	99	86.997	Sarcophilus_harrisii
ENSMOCG00000000465	Gfm1	100	78.296	ENSSFOG00015003117	gfm1	99	80.138	Scleropages_formosus
ENSMOCG00000000465	Gfm1	100	78.162	ENSSMAG00000013221	gfm1	99	78.162	Scophthalmus_maximus
ENSMOCG00000000465	Gfm1	99	79.082	ENSSDUG00000018665	gfm1	100	78.029	Seriola_dumerili
ENSMOCG00000000465	Gfm1	100	77.896	ENSSLDG00000020606	gfm1	100	77.896	Seriola_lalandi_dorsalis
ENSMOCG00000000465	Gfm1	96	82.058	ENSSPUG00000018686	GFM1	97	82.058	Sphenodon_punctatus
ENSMOCG00000000465	Gfm1	100	78.429	ENSSPAG00000008800	gfm1	100	78.429	Stegastes_partitus
ENSMOCG00000000465	Gfm1	100	92.706	ENSSSCG00000025651	GFM1	100	92.706	Sus_scrofa
ENSMOCG00000000465	Gfm1	100	78.029	ENSTRUG00000009244	gfm1	100	78.029	Takifugu_rubripes
ENSMOCG00000000465	Gfm1	100	79.095	ENSTNIG00000007729	gfm1	100	79.095	Tetraodon_nigroviridis
ENSMOCG00000000465	Gfm1	98	77.733	ENSTBEG00000017404	GFM1	100	77.646	Tupaia_belangeri
ENSMOCG00000000465	Gfm1	98	93.360	ENSTTRG00000001735	GFM1	100	91.942	Tursiops_truncatus
ENSMOCG00000000465	Gfm1	98	92.828	ENSUAMG00000026381	GFM1	100	92.440	Ursus_americanus
ENSMOCG00000000465	Gfm1	98	92.693	ENSUMAG00000011268	GFM1	100	92.308	Ursus_maritimus
ENSMOCG00000000465	Gfm1	100	89.376	ENSVPAG00000009444	GFM1	100	89.376	Vicugna_pacos
ENSMOCG00000000465	Gfm1	99	91.455	ENSVVUG00000020091	GFM1	100	93.787	Vulpes_vulpes
ENSMOCG00000000465	Gfm1	100	82.846	ENSXETG00000032551	GFM1	100	82.846	Xenopus_tropicalis
ENSMOCG00000000465	Gfm1	52	79.795	ENSXCOG00000012590	gfm1	90	79.795	Xiphophorus_couchianus
ENSMOCG00000000465	Gfm1	100	79.760	ENSXMAG00000000261	gfm1	100	79.760	Xiphophorus_maculatus