EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000000661 (Gene tree)
Gene ID: 101985394
Gene Symbol: Rpusd4
Alias: 2410001E19Rik
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 9136 bases
Position: chr5:29384452-29393587
Accession: 101985394
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000000845	PseudoU_synth_2	PF00849.22	6.2e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000000877	-	1784	XM_005347022	ENSMOCP00000000845	377 (aa)	XP_005347079	UPI00038BE04F

Gene Model

Click here to download ENSMOCG00000000661's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000000661's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000000661	Rpusd4	100	77.719	ENSG00000165526	RPUSD4	100	77.719	Homo_sapiens
ENSMOCG00000000661	Rpusd4	86	50.915	ENSAPOG00000011024	rpusd4	82	50.915	Acanthochromis_polyacanthus
ENSMOCG00000000661	Rpusd4	100	76.923	ENSAMEG00000000127	-	100	76.923	Ailuropoda_melanoleuca
ENSMOCG00000000661	Rpusd4	62	81.148	ENSAMEG00000005953	-	99	81.148	Ailuropoda_melanoleuca
ENSMOCG00000000661	Rpusd4	86	48.024	ENSACIG00000003533	rpusd4	96	48.024	Amphilophus_citrinellus
ENSMOCG00000000661	Rpusd4	90	49.419	ENSAOCG00000015409	rpusd4	85	49.419	Amphiprion_ocellaris
ENSMOCG00000000661	Rpusd4	90	49.709	ENSAPEG00000018935	rpusd4	85	49.709	Amphiprion_percula
ENSMOCG00000000661	Rpusd4	88	48.810	ENSATEG00000008059	rpusd4	83	48.810	Anabas_testudineus
ENSMOCG00000000661	Rpusd4	73	58.781	ENSAPLG00000013250	RPUSD4	99	57.679	Anas_platyrhynchos
ENSMOCG00000000661	Rpusd4	97	58.649	ENSACAG00000000189	RPUSD4	100	58.649	Anolis_carolinensis
ENSMOCG00000000661	Rpusd4	99	79.301	ENSANAG00000024050	RPUSD4	100	79.301	Aotus_nancymaae
ENSMOCG00000000661	Rpusd4	91	48.991	ENSACLG00000020996	rpusd4	87	48.991	Astatotilapia_calliptera
ENSMOCG00000000661	Rpusd4	91	46.839	ENSAMXG00000031479	rpusd4	95	47.478	Astyanax_mexicanus
ENSMOCG00000000661	Rpusd4	98	73.656	ENSBTAG00000020900	RPUSD4	98	73.656	Bos_taurus
ENSMOCG00000000661	Rpusd4	98	79.730	ENSCJAG00000042850	RPUSD4	93	79.730	Callithrix_jacchus
ENSMOCG00000000661	Rpusd4	100	78.307	ENSCAFG00000010488	RPUSD4	100	78.307	Canis_familiaris
ENSMOCG00000000661	Rpusd4	100	78.307	ENSCAFG00020010621	RPUSD4	100	78.307	Canis_lupus_dingo
ENSMOCG00000000661	Rpusd4	98	73.995	ENSCHIG00000009975	RPUSD4	98	73.995	Capra_hircus
ENSMOCG00000000661	Rpusd4	98	79.730	ENSTSYG00000008456	RPUSD4	98	79.730	Carlito_syrichta
ENSMOCG00000000661	Rpusd4	68	76.744	ENSCAPG00000006040	RPUSD4	100	76.744	Cavia_aperea
ENSMOCG00000000661	Rpusd4	100	76.658	ENSCPOG00000014971	RPUSD4	100	76.658	Cavia_porcellus
ENSMOCG00000000661	Rpusd4	99	79.839	ENSCCAG00000027838	RPUSD4	100	79.839	Cebus_capucinus
ENSMOCG00000000661	Rpusd4	100	77.984	ENSCATG00000041570	RPUSD4	100	77.984	Cercocebus_atys
ENSMOCG00000000661	Rpusd4	100	78.780	ENSCLAG00000016553	RPUSD4	100	78.780	Chinchilla_lanigera
ENSMOCG00000000661	Rpusd4	100	78.249	ENSCSAG00000002274	RPUSD4	100	78.249	Chlorocebus_sabaeus
ENSMOCG00000000661	Rpusd4	73	81.227	ENSCHOG00000010249	RPUSD4	98	81.227	Choloepus_hoffmanni
ENSMOCG00000000661	Rpusd4	75	67.719	ENSCPBG00000011175	RPUSD4	98	67.719	Chrysemys_picta_bellii
ENSMOCG00000000661	Rpusd4	71	40.794	ENSCSAVG00000000872	-	54	40.794	Ciona_savignyi
ENSMOCG00000000661	Rpusd4	100	77.719	ENSCANG00000039684	RPUSD4	100	77.719	Colobus_angolensis_palliatus
ENSMOCG00000000661	Rpusd4	100	90.716	ENSCGRG00001024141	Rpusd4	100	90.716	Cricetulus_griseus_chok1gshd
ENSMOCG00000000661	Rpusd4	100	90.716	ENSCGRG00000014415	Rpusd4	100	90.716	Cricetulus_griseus_crigri
ENSMOCG00000000661	Rpusd4	86	50.151	ENSCVAG00000008761	rpusd4	91	48.603	Cyprinodon_variegatus
ENSMOCG00000000661	Rpusd4	86	50.453	ENSCVAG00000000392	rpusd4	93	50.453	Cyprinodon_variegatus
ENSMOCG00000000661	Rpusd4	85	48.000	ENSDARG00000012674	rpusd4	91	48.000	Danio_rerio
ENSMOCG00000000661	Rpusd4	100	73.475	ENSDNOG00000020026	RPUSD4	100	73.475	Dasypus_novemcinctus
ENSMOCG00000000661	Rpusd4	98	78.167	ENSDORG00000016717	Rpusd4	98	78.167	Dipodomys_ordii
ENSMOCG00000000661	Rpusd4	97	74.863	ENSETEG00000013953	RPUSD4	97	74.863	Echinops_telfairi
ENSMOCG00000000661	Rpusd4	100	78.780	ENSEASG00005022982	RPUSD4	100	78.780	Equus_asinus_asinus
ENSMOCG00000000661	Rpusd4	100	77.984	ENSECAG00000000557	RPUSD4	100	77.984	Equus_caballus
ENSMOCG00000000661	Rpusd4	80	77.717	ENSEEUG00000014036	RPUSD4	80	77.717	Erinaceus_europaeus
ENSMOCG00000000661	Rpusd4	88	53.353	ENSELUG00000008075	rpusd4	90	53.353	Esox_lucius
ENSMOCG00000000661	Rpusd4	100	77.719	ENSFCAG00000029789	RPUSD4	100	77.719	Felis_catus
ENSMOCG00000000661	Rpusd4	89	55.457	ENSFALG00000005171	RPUSD4	99	55.457	Ficedula_albicollis
ENSMOCG00000000661	Rpusd4	99	77.719	ENSFDAG00000014307	RPUSD4	99	77.719	Fukomys_damarensis
ENSMOCG00000000661	Rpusd4	93	48.305	ENSFHEG00000004329	rpusd4	90	48.305	Fundulus_heteroclitus
ENSMOCG00000000661	Rpusd4	85	49.387	ENSGMOG00000017726	rpusd4	96	49.387	Gadus_morhua
ENSMOCG00000000661	Rpusd4	74	60.993	ENSGALG00000024326	RPUSD4	94	56.119	Gallus_gallus
ENSMOCG00000000661	Rpusd4	87	47.198	ENSGAFG00000021559	rpusd4	86	47.198	Gambusia_affinis
ENSMOCG00000000661	Rpusd4	89	48.235	ENSGACG00000001657	rpusd4	100	48.529	Gasterosteus_aculeatus
ENSMOCG00000000661	Rpusd4	95	59.053	ENSGAGG00000000132	RPUSD4	98	59.053	Gopherus_agassizii
ENSMOCG00000000661	Rpusd4	100	77.984	ENSGGOG00000016494	RPUSD4	100	77.984	Gorilla_gorilla
ENSMOCG00000000661	Rpusd4	91	48.991	ENSHBUG00000022838	rpusd4	87	48.991	Haplochromis_burtoni
ENSMOCG00000000661	Rpusd4	100	78.515	ENSHGLG00000002285	RPUSD4	100	78.515	Heterocephalus_glaber_female
ENSMOCG00000000661	Rpusd4	100	78.515	ENSHGLG00100006385	RPUSD4	100	78.515	Heterocephalus_glaber_male
ENSMOCG00000000661	Rpusd4	86	50.000	ENSHCOG00000006612	rpusd4	83	50.000	Hippocampus_comes
ENSMOCG00000000661	Rpusd4	91	49.711	ENSIPUG00000023879	rusd4	89	49.711	Ictalurus_punctatus
ENSMOCG00000000661	Rpusd4	97	79.670	ENSSTOG00000025280	RPUSD4	100	79.670	Ictidomys_tridecemlineatus
ENSMOCG00000000661	Rpusd4	99	82.258	ENSJJAG00000018673	Rpusd4	100	82.258	Jaculus_jaculus
ENSMOCG00000000661	Rpusd4	85	51.534	ENSKMAG00000021805	rpusd4	84	51.534	Kryptolebias_marmoratus
ENSMOCG00000000661	Rpusd4	94	46.400	ENSLBEG00000020394	rpusd4	96	46.400	Labrus_bergylta
ENSMOCG00000000661	Rpusd4	85	59.568	ENSLACG00000011028	RPUSD4	94	55.882	Latimeria_chalumnae
ENSMOCG00000000661	Rpusd4	89	45.000	ENSLOCG00000003124	rpusd4	91	45.000	Lepisosteus_oculatus
ENSMOCG00000000661	Rpusd4	98	76.550	ENSLAFG00000005211	RPUSD4	98	76.550	Loxodonta_africana
ENSMOCG00000000661	Rpusd4	100	77.984	ENSMFAG00000039513	RPUSD4	100	77.984	Macaca_fascicularis
ENSMOCG00000000661	Rpusd4	100	77.719	ENSMMUG00000007933	RPUSD4	100	77.719	Macaca_mulatta
ENSMOCG00000000661	Rpusd4	100	77.719	ENSMNEG00000027414	RPUSD4	100	77.719	Macaca_nemestrina
ENSMOCG00000000661	Rpusd4	100	77.719	ENSMLEG00000042461	RPUSD4	100	77.719	Mandrillus_leucophaeus
ENSMOCG00000000661	Rpusd4	90	48.266	ENSMAMG00000023839	rpusd4	87	48.266	Mastacembelus_armatus
ENSMOCG00000000661	Rpusd4	91	48.991	ENSMZEG00005011999	rpusd4	87	48.991	Maylandia_zebra
ENSMOCG00000000661	Rpusd4	74	59.286	ENSMGAG00000000840	RPUSD4	99	56.250	Meleagris_gallopavo
ENSMOCG00000000661	Rpusd4	100	88.064	ENSMAUG00000010280	Rpusd4	100	88.064	Mesocricetus_auratus
ENSMOCG00000000661	Rpusd4	99	78.495	ENSMICG00000015979	RPUSD4	99	78.495	Microcebus_murinus
ENSMOCG00000000661	Rpusd4	78	53.177	ENSMMOG00000021731	rpusd4	88	53.177	Mola_mola
ENSMOCG00000000661	Rpusd4	86	73.006	ENSMODG00000004521	RPUSD4	84	73.006	Monodelphis_domestica
ENSMOCG00000000661	Rpusd4	79	51.987	ENSMALG00000005839	rpusd4	97	50.155	Monopterus_albus
ENSMOCG00000000661	Rpusd4	100	86.207	MGP_CAROLIEiJ_G0031954	Rpusd4	100	86.207	Mus_caroli
ENSMOCG00000000661	Rpusd4	99	86.702	ENSMUSG00000032044	Rpusd4	99	86.702	Mus_musculus
ENSMOCG00000000661	Rpusd4	100	86.472	MGP_PahariEiJ_G0014819	Rpusd4	100	86.472	Mus_pahari
ENSMOCG00000000661	Rpusd4	99	86.170	MGP_SPRETEiJ_G0033078	Rpusd4	99	86.170	Mus_spretus
ENSMOCG00000000661	Rpusd4	98	76.280	ENSMPUG00000006608	RPUSD4	99	76.280	Mustela_putorius_furo
ENSMOCG00000000661	Rpusd4	89	80.415	ENSMLUG00000017328	-	96	76.438	Myotis_lucifugus
ENSMOCG00000000661	Rpusd4	67	79.528	ENSMLUG00000029348	-	100	79.528	Myotis_lucifugus
ENSMOCG00000000661	Rpusd4	98	81.132	ENSNGAG00000020847	Rpusd4	98	81.132	Nannospalax_galili
ENSMOCG00000000661	Rpusd4	86	50.456	ENSNBRG00000005207	rpusd4	95	50.456	Neolamprologus_brichardi
ENSMOCG00000000661	Rpusd4	99	79.570	ENSNLEG00000007465	RPUSD4	99	79.570	Nomascus_leucogenys
ENSMOCG00000000661	Rpusd4	97	67.033	ENSMEUG00000004370	RPUSD4	98	67.033	Notamacropus_eugenii
ENSMOCG00000000661	Rpusd4	70	55.094	ENSOPRG00000013141	-	100	55.094	Ochotona_princeps
ENSMOCG00000000661	Rpusd4	99	77.984	ENSODEG00000004577	RPUSD4	100	77.984	Octodon_degus
ENSMOCG00000000661	Rpusd4	94	49.167	ENSONIG00000018879	rpusd4	96	49.167	Oreochromis_niloticus
ENSMOCG00000000661	Rpusd4	82	64.423	ENSOANG00000007247	RPUSD4	99	64.423	Ornithorhynchus_anatinus
ENSMOCG00000000661	Rpusd4	98	77.748	ENSOCUG00000017039	RPUSD4	98	77.748	Oryctolagus_cuniculus
ENSMOCG00000000661	Rpusd4	90	48.116	ENSORLG00000002750	rpusd4	94	48.116	Oryzias_latipes
ENSMOCG00000000661	Rpusd4	89	47.788	ENSORLG00020002044	rpusd4	84	47.788	Oryzias_latipes_hni
ENSMOCG00000000661	Rpusd4	89	48.083	ENSORLG00015020034	rpusd4	81	48.923	Oryzias_latipes_hsok
ENSMOCG00000000661	Rpusd4	89	48.105	ENSOMEG00000004861	rpusd4	84	48.105	Oryzias_melastigma
ENSMOCG00000000661	Rpusd4	99	77.212	ENSOGAG00000008922	RPUSD4	99	77.212	Otolemur_garnettii
ENSMOCG00000000661	Rpusd4	96	74.725	ENSOARG00000012238	RPUSD4	97	74.659	Ovis_aries
ENSMOCG00000000661	Rpusd4	100	77.984	ENSPPAG00000042883	RPUSD4	93	77.984	Pan_paniscus
ENSMOCG00000000661	Rpusd4	100	77.719	ENSPPRG00000003081	RPUSD4	100	77.719	Panthera_pardus
ENSMOCG00000000661	Rpusd4	100	77.719	ENSPTIG00000012059	RPUSD4	100	77.719	Panthera_tigris_altaica
ENSMOCG00000000661	Rpusd4	100	77.719	ENSPTRG00000004454	RPUSD4	100	77.719	Pan_troglodytes
ENSMOCG00000000661	Rpusd4	100	78.249	ENSPANG00000015040	RPUSD4	100	78.249	Papio_anubis
ENSMOCG00000000661	Rpusd4	89	55.325	ENSPKIG00000023986	rpusd4	86	55.325	Paramormyrops_kingsleyae
ENSMOCG00000000661	Rpusd4	79	66.779	ENSPSIG00000014268	RPUSD4	95	66.779	Pelodiscus_sinensis
ENSMOCG00000000661	Rpusd4	86	48.936	ENSPMGG00000002806	rpusd4	91	48.780	Periophthalmus_magnuspinnatus
ENSMOCG00000000661	Rpusd4	100	81.432	ENSPEMG00000000278	Rpusd4	100	81.432	Peromyscus_maniculatus_bairdii
ENSMOCG00000000661	Rpusd4	79	44.242	ENSPMAG00000008183	rpusd4	95	44.242	Petromyzon_marinus
ENSMOCG00000000661	Rpusd4	91	70.640	ENSPCIG00000010212	RPUSD4	95	70.640	Phascolarctos_cinereus
ENSMOCG00000000661	Rpusd4	86	49.102	ENSPFOG00000019030	rpusd4	87	49.102	Poecilia_formosa
ENSMOCG00000000661	Rpusd4	88	49.118	ENSPLAG00000016848	rpusd4	86	49.118	Poecilia_latipinna
ENSMOCG00000000661	Rpusd4	88	47.941	ENSPMEG00000017534	rpusd4	86	47.941	Poecilia_mexicana
ENSMOCG00000000661	Rpusd4	84	49.080	ENSPREG00000005689	rpusd4	84	49.080	Poecilia_reticulata
ENSMOCG00000000661	Rpusd4	100	77.984	ENSPPYG00000004043	RPUSD4	100	77.984	Pongo_abelii
ENSMOCG00000000661	Rpusd4	80	74.595	ENSPCAG00000000753	RPUSD4	82	74.595	Procavia_capensis
ENSMOCG00000000661	Rpusd4	98	70.889	ENSPCOG00000020694	RPUSD4	100	70.889	Propithecus_coquereli
ENSMOCG00000000661	Rpusd4	97	80.328	ENSPVAG00000000988	RPUSD4	98	80.328	Pteropus_vampyrus
ENSMOCG00000000661	Rpusd4	91	48.415	ENSPNYG00000009652	rpusd4	87	48.415	Pundamilia_nyererei
ENSMOCG00000000661	Rpusd4	88	49.701	ENSPNAG00000012264	rpusd4	88	49.701	Pygocentrus_nattereri
ENSMOCG00000000661	Rpusd4	99	87.500	ENSRNOG00000011567	Rpusd4	99	87.500	Rattus_norvegicus
ENSMOCG00000000661	Rpusd4	96	80.332	ENSRBIG00000034842	RPUSD4	100	78.515	Rhinopithecus_bieti
ENSMOCG00000000661	Rpusd4	96	80.332	ENSRROG00000039753	RPUSD4	100	78.515	Rhinopithecus_roxellana
ENSMOCG00000000661	Rpusd4	99	78.763	ENSSBOG00000030413	RPUSD4	100	78.763	Saimiri_boliviensis_boliviensis
ENSMOCG00000000661	Rpusd4	79	74.662	ENSSHAG00000008304	RPUSD4	98	74.662	Sarcophilus_harrisii
ENSMOCG00000000661	Rpusd4	90	52.707	ENSSFOG00015006203	rpusd4	93	52.707	Scleropages_formosus
ENSMOCG00000000661	Rpusd4	90	49.563	ENSSMAG00000020978	rpusd4	89	49.563	Scophthalmus_maximus
ENSMOCG00000000661	Rpusd4	89	47.507	ENSSDUG00000013399	rpusd4	89	47.507	Seriola_dumerili
ENSMOCG00000000661	Rpusd4	89	47.214	ENSSLDG00000023507	rpusd4	89	47.214	Seriola_lalandi_dorsalis
ENSMOCG00000000661	Rpusd4	90	61.111	ENSSPUG00000001401	RPUSD4	94	61.337	Sphenodon_punctatus
ENSMOCG00000000661	Rpusd4	91	50.000	ENSSPAG00000012163	rpusd4	89	50.000	Stegastes_partitus
ENSMOCG00000000661	Rpusd4	98	77.628	ENSSSCG00000015233	RPUSD4	98	77.628	Sus_scrofa
ENSMOCG00000000661	Rpusd4	77	59.864	ENSTGUG00000000773	RPUSD4	98	59.864	Taeniopygia_guttata
ENSMOCG00000000661	Rpusd4	86	50.303	ENSTRUG00000012283	rpusd4	84	50.303	Takifugu_rubripes
ENSMOCG00000000661	Rpusd4	92	47.159	ENSTNIG00000014676	rpusd4	89	47.159	Tetraodon_nigroviridis
ENSMOCG00000000661	Rpusd4	98	76.819	ENSTTRG00000001555	RPUSD4	98	76.819	Tursiops_truncatus
ENSMOCG00000000661	Rpusd4	100	76.393	ENSUMAG00000002219	RPUSD4	100	76.393	Ursus_maritimus
ENSMOCG00000000661	Rpusd4	70	77.068	ENSVPAG00000001066	RPUSD4	100	77.068	Vicugna_pacos
ENSMOCG00000000661	Rpusd4	100	78.100	ENSVVUG00000020101	RPUSD4	100	78.100	Vulpes_vulpes
ENSMOCG00000000661	Rpusd4	85	49.849	ENSXCOG00000004676	rpusd4	86	49.547	Xiphophorus_couchianus
ENSMOCG00000000661	Rpusd4	85	49.849	ENSXMAG00000023351	rpusd4	84	49.849	Xiphophorus_maculatus