EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000000753 (Gene tree)
Gene ID: 102000073
Gene Symbol: Prdm4
Alias: 1700031E19Rik|2810470D21Rik|SC-1|SC1
Full Name: PR/SET domain 4
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 22408 bases
Position: chr24:36598362-36620769
Accession: 102000073
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000000972	zf-C2H2	PF00096.26	2.7e-20	1	2
ENSMOCP00000000972	zf-C2H2	PF00096.26	2.7e-20	2	2
ENSMOCP00000000972	zf-met	PF12874.7	3.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000001006	-	3649	XM_013350395	ENSMOCP00000000972	801 (aa)	XP_013205849	UPI00067DD58C

Gene Model

Click here to download ENSMOCG00000000753's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000000753's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000000753	Prdm4	99	93.734	ENSG00000110851	PRDM4	99	93.985	Homo_sapiens
ENSMOCG00000000753	Prdm4	99	93.392	ENSAMEG00000016174	PRDM4	100	93.142	Ailuropoda_melanoleuca
ENSMOCG00000000753	Prdm4	99	85.625	ENSAPLG00000009846	PRDM4	100	85.250	Anas_platyrhynchos
ENSMOCG00000000753	Prdm4	99	93.609	ENSANAG00000024800	PRDM4	99	92.982	Aotus_nancymaae
ENSMOCG00000000753	Prdm4	99	93.233	ENSBTAG00000012999	PRDM4	99	93.484	Bos_taurus
ENSMOCG00000000753	Prdm4	99	93.358	ENSCJAG00000015261	PRDM4	99	93.609	Callithrix_jacchus
ENSMOCG00000000753	Prdm4	99	93.233	ENSCAFG00000001788	PRDM4	100	93.009	Canis_familiaris
ENSMOCG00000000753	Prdm4	99	93.233	ENSCAFG00020004916	PRDM4	99	93.484	Canis_lupus_dingo
ENSMOCG00000000753	Prdm4	99	93.108	ENSCHIG00000019409	PRDM4	99	93.358	Capra_hircus
ENSMOCG00000000753	Prdm4	99	93.233	ENSTSYG00000009248	PRDM4	99	93.484	Carlito_syrichta
ENSMOCG00000000753	Prdm4	99	89.862	ENSCAPG00000013937	PRDM4	99	89.862	Cavia_aperea
ENSMOCG00000000753	Prdm4	99	89.317	ENSCPOG00000022385	PRDM4	100	89.317	Cavia_porcellus
ENSMOCG00000000753	Prdm4	99	93.734	ENSCCAG00000036033	PRDM4	99	93.985	Cebus_capucinus
ENSMOCG00000000753	Prdm4	99	93.609	ENSCATG00000044797	PRDM4	99	93.860	Cercocebus_atys
ENSMOCG00000000753	Prdm4	99	90.423	ENSCLAG00000007545	PRDM4	100	90.796	Chinchilla_lanigera
ENSMOCG00000000753	Prdm4	99	93.860	ENSCSAG00000002896	PRDM4	99	94.110	Chlorocebus_sabaeus
ENSMOCG00000000753	Prdm4	71	96.262	ENSCHOG00000001744	PRDM4	85	96.262	Choloepus_hoffmanni
ENSMOCG00000000753	Prdm4	99	86.307	ENSCPBG00000023187	PRDM4	100	85.930	Chrysemys_picta_bellii
ENSMOCG00000000753	Prdm4	99	93.734	ENSCANG00000021804	PRDM4	99	93.985	Colobus_angolensis_palliatus
ENSMOCG00000000753	Prdm4	99	95.641	ENSCGRG00001015102	-	100	95.641	Cricetulus_griseus_chok1gshd
ENSMOCG00000000753	Prdm4	96	95.220	ENSCGRG00000004044	-	100	94.961	Cricetulus_griseus_crigri
ENSMOCG00000000753	Prdm4	99	93.358	ENSDNOG00000032478	PRDM4	99	94.676	Dasypus_novemcinctus
ENSMOCG00000000753	Prdm4	99	79.523	ENSDORG00000015081	-	100	79.523	Dipodomys_ordii
ENSMOCG00000000753	Prdm4	93	45.518	ENSEBUG00000003775	prdm4	99	45.706	Eptatretus_burgeri
ENSMOCG00000000753	Prdm4	99	93.358	ENSECAG00000015423	PRDM4	99	93.827	Equus_caballus
ENSMOCG00000000753	Prdm4	94	90.800	ENSEEUG00000006569	PRDM4	99	90.533	Erinaceus_europaeus
ENSMOCG00000000753	Prdm4	99	60.389	ENSELUG00000015265	prdm4	99	60.267	Esox_lucius
ENSMOCG00000000753	Prdm4	99	93.609	ENSFCAG00000022478	PRDM4	99	93.860	Felis_catus
ENSMOCG00000000753	Prdm4	99	85.678	ENSFALG00000013342	PRDM4	100	85.678	Ficedula_albicollis
ENSMOCG00000000753	Prdm4	99	85.910	ENSGALG00000012619	PRDM4	100	85.536	Gallus_gallus
ENSMOCG00000000753	Prdm4	99	85.750	ENSGAGG00000002763	PRDM4	95	85.375	Gopherus_agassizii
ENSMOCG00000000753	Prdm4	99	93.609	ENSGGOG00000001244	PRDM4	99	93.860	Gorilla_gorilla
ENSMOCG00000000753	Prdm4	99	91.709	ENSHGLG00000004590	PRDM4	98	91.709	Heterocephalus_glaber_female
ENSMOCG00000000753	Prdm4	99	90.796	ENSHGLG00100007464	PRDM4	100	90.796	Heterocephalus_glaber_male
ENSMOCG00000000753	Prdm4	95	60.881	ENSIPUG00000024162	prdm4	93	61.227	Ictalurus_punctatus
ENSMOCG00000000753	Prdm4	99	93.258	ENSSTOG00000016168	PRDM4	100	93.508	Ictidomys_tridecemlineatus
ENSMOCG00000000753	Prdm4	81	92.703	ENSJJAG00000022448	-	95	92.703	Jaculus_jaculus
ENSMOCG00000000753	Prdm4	99	71.945	ENSLACG00000007452	PRDM4	99	72.070	Latimeria_chalumnae
ENSMOCG00000000753	Prdm4	78	41.953	ENSLOCG00000017092	prdm4	100	53.247	Lepisosteus_oculatus
ENSMOCG00000000753	Prdm4	97	93.401	ENSLAFG00000001483	PRDM4	100	93.655	Loxodonta_africana
ENSMOCG00000000753	Prdm4	99	93.985	ENSMFAG00000041862	PRDM4	99	94.236	Macaca_fascicularis
ENSMOCG00000000753	Prdm4	100	93.766	ENSMMUG00000015550	PRDM4	100	94.015	Macaca_mulatta
ENSMOCG00000000753	Prdm4	99	93.985	ENSMNEG00000032319	PRDM4	99	94.236	Macaca_nemestrina
ENSMOCG00000000753	Prdm4	99	93.860	ENSMLEG00000039607	PRDM4	99	94.110	Mandrillus_leucophaeus
ENSMOCG00000000753	Prdm4	99	78.223	ENSMGAG00000012815	PRDM4	100	77.847	Meleagris_gallopavo
ENSMOCG00000000753	Prdm4	99	92.857	ENSMICG00000007807	PRDM4	99	93.360	Microcebus_murinus
ENSMOCG00000000753	Prdm4	99	94.724	ENSMUSG00000035529	Prdm4	100	94.724	Mus_musculus
ENSMOCG00000000753	Prdm4	99	94.479	MGP_PahariEiJ_G0031398	Prdm4	100	94.981	Mus_pahari
ENSMOCG00000000753	Prdm4	99	94.354	MGP_SPRETEiJ_G0016505	Prdm4	100	94.856	Mus_spretus
ENSMOCG00000000753	Prdm4	99	87.391	ENSMPUG00000012238	PRDM4	99	87.141	Mustela_putorius_furo
ENSMOCG00000000753	Prdm4	99	93.758	ENSMLUG00000000767	PRDM4	100	94.007	Myotis_lucifugus
ENSMOCG00000000753	Prdm4	99	95.107	ENSNGAG00000018627	Prdm4	100	95.358	Nannospalax_galili
ENSMOCG00000000753	Prdm4	99	93.860	ENSNLEG00000006748	PRDM4	99	94.110	Nomascus_leucogenys
ENSMOCG00000000753	Prdm4	89	86.854	ENSMEUG00000004495	PRDM4	89	86.854	Notamacropus_eugenii
ENSMOCG00000000753	Prdm4	88	92.560	ENSOPRG00000010192	PRDM4	89	93.155	Ochotona_princeps
ENSMOCG00000000753	Prdm4	99	88.945	ENSODEG00000014750	PRDM4	99	89.322	Octodon_degus
ENSMOCG00000000753	Prdm4	99	88.095	ENSOANG00000005526	PRDM4	99	88.095	Ornithorhynchus_anatinus
ENSMOCG00000000753	Prdm4	93	94.134	ENSOCUG00000012859	PRDM4	96	94.134	Oryctolagus_cuniculus
ENSMOCG00000000753	Prdm4	99	93.852	ENSOGAG00000011945	PRDM4	100	93.977	Otolemur_garnettii
ENSMOCG00000000753	Prdm4	99	92.732	ENSOARG00000017955	PRDM4	99	92.982	Ovis_aries
ENSMOCG00000000753	Prdm4	99	93.985	ENSPPAG00000038438	PRDM4	99	94.236	Pan_paniscus
ENSMOCG00000000753	Prdm4	99	93.609	ENSPPRG00000004144	PRDM4	99	93.860	Panthera_pardus
ENSMOCG00000000753	Prdm4	99	93.609	ENSPTIG00000005847	PRDM4	99	93.860	Panthera_tigris_altaica
ENSMOCG00000000753	Prdm4	99	93.734	ENSPTRG00000005400	PRDM4	99	93.985	Pan_troglodytes
ENSMOCG00000000753	Prdm4	99	93.985	ENSPANG00000022084	PRDM4	99	94.236	Papio_anubis
ENSMOCG00000000753	Prdm4	99	59.527	ENSPKIG00000000875	prdm4	100	59.763	Paramormyrops_kingsleyae
ENSMOCG00000000753	Prdm4	91	78.977	ENSPSIG00000012066	PRDM4	100	79.167	Pelodiscus_sinensis
ENSMOCG00000000753	Prdm4	99	97.491	ENSPEMG00000014598	Prdm4	100	97.491	Peromyscus_maniculatus_bairdii
ENSMOCG00000000753	Prdm4	99	86.567	ENSPCIG00000009471	PRDM4	100	86.567	Phascolarctos_cinereus
ENSMOCG00000000753	Prdm4	99	93.609	ENSPPYG00000004913	PRDM4	99	93.860	Pongo_abelii
ENSMOCG00000000753	Prdm4	83	92.395	ENSPCAG00000009987	PRDM4	83	92.718	Procavia_capensis
ENSMOCG00000000753	Prdm4	99	92.732	ENSPCOG00000021060	PRDM4	99	92.982	Propithecus_coquereli
ENSMOCG00000000753	Prdm4	99	92.741	ENSPVAG00000001596	PRDM4	99	92.991	Pteropus_vampyrus
ENSMOCG00000000753	Prdm4	99	94.361	ENSRNOG00000004962	Prdm4	100	94.236	Rattus_norvegicus
ENSMOCG00000000753	Prdm4	99	93.734	ENSRBIG00000035488	PRDM4	99	93.985	Rhinopithecus_bieti
ENSMOCG00000000753	Prdm4	99	93.860	ENSRROG00000012779	PRDM4	99	94.110	Rhinopithecus_roxellana
ENSMOCG00000000753	Prdm4	99	93.860	ENSSBOG00000000403	PRDM4	99	94.110	Saimiri_boliviensis_boliviensis
ENSMOCG00000000753	Prdm4	99	63.333	ENSSFOG00015023358	prdm4	98	63.457	Scleropages_formosus
ENSMOCG00000000753	Prdm4	99	93.233	ENSSSCG00000000160	PRDM4	99	93.734	Sus_scrofa
ENSMOCG00000000753	Prdm4	99	85.750	ENSTGUG00000010962	-	100	85.750	Taeniopygia_guttata
ENSMOCG00000000753	Prdm4	73	87.884	ENSTBEG00000001732	PRDM4	84	87.884	Tupaia_belangeri
ENSMOCG00000000753	Prdm4	99	93.484	ENSTTRG00000011056	PRDM4	99	93.734	Tursiops_truncatus
ENSMOCG00000000753	Prdm4	99	93.484	ENSUAMG00000022796	PRDM4	99	93.734	Ursus_americanus
ENSMOCG00000000753	Prdm4	99	93.484	ENSUMAG00000017231	PRDM4	99	93.734	Ursus_maritimus
ENSMOCG00000000753	Prdm4	99	93.601	ENSVPAG00000002215	PRDM4	100	93.852	Vicugna_pacos
ENSMOCG00000000753	Prdm4	99	93.233	ENSVVUG00000023397	PRDM4	99	93.484	Vulpes_vulpes