EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000000848 (Gene tree)
Gene ID: 101989437
Gene Symbol: Setx
Alias: A930037J23Rik|Als4
Full Name: senataxin
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 52717 bases
Position: chr4:47951006-48003722
Accession: 101989437
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000001111	SEN1_N	PF12726.7	3e-12	1	1
ENSMOCP00000001109	SEN1_N	PF12726.7	3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000001147	-	7533	XM_013345885	ENSMOCP00000001111	2510 (aa)	XP_013201339	-
ENSMOCT00000001145	-	7659	-	ENSMOCP00000001109	2552 (aa)	-	-

Gene Model

Click here to download ENSMOCG00000000848's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000000848's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000000848	Setx	99	68.000	ENSG00000107290	SETX	97	76.247	Homo_sapiens
ENSMOCG00000000848	Setx	76	43.894	ENSAMXG00000014406	-	82	43.993	Astyanax_mexicanus
ENSMOCG00000000848	Setx	99	67.732	ENSCJAG00000018245	SETX	99	67.029	Callithrix_jacchus
ENSMOCG00000000848	Setx	99	65.088	ENSCPOG00000001492	SETX	99	64.374	Cavia_porcellus
ENSMOCG00000000848	Setx	99	67.885	ENSCLAG00000012582	SETX	99	67.808	Chinchilla_lanigera
ENSMOCG00000000848	Setx	72	90.618	ENSETEG00000008111	-	69	90.618	Echinops_telfairi
ENSMOCG00000000848	Setx	91	70.470	ENSECAG00000012019	SETX	99	69.901	Equus_caballus
ENSMOCG00000000848	Setx	78	45.336	ENSELUG00000022536	-	78	45.336	Esox_lucius
ENSMOCG00000000848	Setx	99	66.958	ENSFCAG00000007102	SETX	99	66.567	Felis_catus
ENSMOCG00000000848	Setx	79	69.573	ENSFALG00000001464	SETX	85	69.573	Ficedula_albicollis
ENSMOCG00000000848	Setx	99	66.552	ENSGGOG00000027664	SETX	93	80.051	Gorilla_gorilla
ENSMOCG00000000848	Setx	67	46.069	ENSIPUG00000006685	setx	74	46.069	Ictalurus_punctatus
ENSMOCG00000000848	Setx	80	55.288	ENSLOCG00000004264	SETX	79	55.288	Lepisosteus_oculatus
ENSMOCG00000000848	Setx	99	79.831	MGP_PahariEiJ_G0024821	Setx	99	79.135	Mus_pahari
ENSMOCG00000000848	Setx	99	65.234	ENSNLEG00000012839	SETX	99	66.922	Nomascus_leucogenys
ENSMOCG00000000848	Setx	97	64.791	ENSOCUG00000005616	SETX	96	64.403	Oryctolagus_cuniculus
ENSMOCG00000000848	Setx	99	67.884	ENSOGAG00000013387	SETX	99	67.149	Otolemur_garnettii
ENSMOCG00000000848	Setx	99	67.619	ENSPPAG00000004108	SETX	93	79.161	Pan_paniscus
ENSMOCG00000000848	Setx	99	67.529	ENSPPRG00000012867	SETX	99	66.867	Panthera_pardus
ENSMOCG00000000848	Setx	99	67.871	ENSPTIG00000021101	SETX	99	66.942	Panthera_tigris_altaica
ENSMOCG00000000848	Setx	99	67.569	ENSPTRG00000021495	SETX	93	79.161	Pan_troglodytes
ENSMOCG00000000848	Setx	71	48.794	ENSPKIG00000025162	SETX	73	48.980	Paramormyrops_kingsleyae
ENSMOCG00000000848	Setx	58	93.103	ENSSARG00000002336	-	61	93.103	Sorex_araneus
ENSMOCG00000000848	Setx	85	72.310	ENSSPUG00000016332	SETX	85	72.310	Sphenodon_punctatus
ENSMOCG00000000848	Setx	99	65.067	ENSSSCG00000005724	SETX	99	65.284	Sus_scrofa
ENSMOCG00000000848	Setx	80	69.915	ENSTGUG00000005117	SETX	85	70.256	Taeniopygia_guttata
ENSMOCG00000000848	Setx	80	63.908	ENSXETG00000006254	setx	86	63.636	Xenopus_tropicalis