EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000001117 (Gene tree)
Gene ID: 101982032
Gene Symbol: Rrp1b
Alias: 2600005C20Rik
Full Name: ribosomal RNA processing 1B
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 23998 bases
Position: chrLG2:48383824-48407821
Accession: 101982032
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000001473	Nop52	PF05997.12	4.8e-61	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000001527	-	2211	XM_005360287	ENSMOCP00000001473	736 (aa)	XP_005360344	-

Gene Model

Click here to download ENSMOCG00000001117's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000001117's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000001117	Rrp1b	100	62.812	ENSG00000160208	RRP1B	100	62.681	Homo_sapiens
ENSMOCG00000001117	Rrp1b	54	64.461	ENSAMEG00000011401	RRP1B	57	62.802	Ailuropoda_melanoleuca
ENSMOCG00000001117	Rrp1b	56	51.389	ENSAOCG00000017894	-	92	54.054	Amphiprion_ocellaris
ENSMOCG00000001117	Rrp1b	100	61.337	ENSANAG00000034889	RRP1B	100	61.235	Aotus_nancymaae
ENSMOCG00000001117	Rrp1b	100	56.728	ENSBTAG00000017418	RRP1B	100	56.522	Bos_taurus
ENSMOCG00000001117	Rrp1b	100	60.658	ENSCJAG00000017077	RRP1B	100	60.526	Callithrix_jacchus
ENSMOCG00000001117	Rrp1b	94	57.303	ENSCAFG00000010621	RRP1B	99	57.444	Canis_familiaris
ENSMOCG00000001117	Rrp1b	100	58.675	ENSCAFG00020018901	RRP1B	100	58.543	Canis_lupus_dingo
ENSMOCG00000001117	Rrp1b	51	44.681	ENSCHIG00000020948	RRP1	75	48.246	Capra_hircus
ENSMOCG00000001117	Rrp1b	100	57.992	ENSCHIG00000021519	RRP1B	100	57.520	Capra_hircus
ENSMOCG00000001117	Rrp1b	100	57.560	ENSCPOG00000002396	RRP1B	100	56.897	Cavia_porcellus
ENSMOCG00000001117	Rrp1b	53	43.885	ENSCCAG00000029828	RRP1	71	48.844	Cebus_capucinus
ENSMOCG00000001117	Rrp1b	100	61.818	ENSCCAG00000029384	RRP1B	100	61.629	Cebus_capucinus
ENSMOCG00000001117	Rrp1b	100	63.075	ENSCATG00000017423	RRP1B	100	62.943	Cercocebus_atys
ENSMOCG00000001117	Rrp1b	100	55.429	ENSCLAG00000005622	RRP1B	100	56.654	Chinchilla_lanigera
ENSMOCG00000001117	Rrp1b	100	63.206	ENSCSAG00000007961	RRP1B	100	63.075	Chlorocebus_sabaeus
ENSMOCG00000001117	Rrp1b	51	53.213	ENSCHOG00000002426	-	55	57.270	Choloepus_hoffmanni
ENSMOCG00000001117	Rrp1b	100	62.943	ENSCANG00000040952	RRP1B	100	62.812	Colobus_angolensis_palliatus
ENSMOCG00000001117	Rrp1b	100	79.088	ENSCGRG00001023882	-	100	79.088	Cricetulus_griseus_chok1gshd
ENSMOCG00000001117	Rrp1b	100	79.625	ENSCGRG00001010889	-	100	79.625	Cricetulus_griseus_chok1gshd
ENSMOCG00000001117	Rrp1b	94	78.521	ENSCGRG00000001553	Rrp1b	97	78.409	Cricetulus_griseus_crigri
ENSMOCG00000001117	Rrp1b	57	55.682	ENSCSEG00000020711	-	74	55.682	Cynoglossus_semilaevis
ENSMOCG00000001117	Rrp1b	58	44.218	ENSDNOG00000019880	RRP1	73	51.479	Dasypus_novemcinctus
ENSMOCG00000001117	Rrp1b	100	55.177	ENSDNOG00000032774	RRP1B	100	55.177	Dasypus_novemcinctus
ENSMOCG00000001117	Rrp1b	93	57.265	ENSDORG00000005496	Rrp1b	100	56.899	Dipodomys_ordii
ENSMOCG00000001117	Rrp1b	100	50.327	ENSETEG00000019489	RRP1B	100	50.261	Echinops_telfairi
ENSMOCG00000001117	Rrp1b	51	45.455	ENSEASG00005001673	RRP1	74	48.810	Equus_asinus_asinus
ENSMOCG00000001117	Rrp1b	100	59.631	ENSEASG00005001687	RRP1B	100	60.026	Equus_asinus_asinus
ENSMOCG00000001117	Rrp1b	51	44.503	ENSECAG00000015703	RRP1	74	49.852	Equus_caballus
ENSMOCG00000001117	Rrp1b	100	59.346	ENSECAG00000018018	RRP1B	100	59.763	Equus_caballus
ENSMOCG00000001117	Rrp1b	63	55.285	ENSELUG00000015885	-	89	41.888	Esox_lucius
ENSMOCG00000001117	Rrp1b	100	56.069	ENSFCAG00000010272	RRP1B	100	55.526	Felis_catus
ENSMOCG00000001117	Rrp1b	51	46.419	ENSFCAG00000008434	RRP1	82	46.419	Felis_catus
ENSMOCG00000001117	Rrp1b	96	57.004	ENSFDAG00000010899	RRP1B	96	56.944	Fukomys_damarensis
ENSMOCG00000001117	Rrp1b	54	42.714	ENSFDAG00000013728	RRP1	74	46.110	Fukomys_damarensis
ENSMOCG00000001117	Rrp1b	57	54.737	ENSFHEG00000016314	-	50	45.255	Fundulus_heteroclitus
ENSMOCG00000001117	Rrp1b	62	47.706	ENSGMOG00000001953	-	69	47.706	Gadus_morhua
ENSMOCG00000001117	Rrp1b	72	48.855	ENSGACG00000001438	rrp1	69	48.855	Gasterosteus_aculeatus
ENSMOCG00000001117	Rrp1b	100	62.681	ENSGGOG00000012069	RRP1B	100	62.549	Gorilla_gorilla
ENSMOCG00000001117	Rrp1b	99	58.667	ENSHGLG00000004968	RRP1B	100	58.933	Heterocephalus_glaber_female
ENSMOCG00000001117	Rrp1b	81	62.170	ENSHGLG00100002232	RRP1B	87	62.099	Heterocephalus_glaber_male
ENSMOCG00000001117	Rrp1b	64	43.704	ENSHCOG00000018388	-	58	43.704	Hippocampus_comes
ENSMOCG00000001117	Rrp1b	59	45.872	ENSIPUG00000000673	-	67	37.989	Ictalurus_punctatus
ENSMOCG00000001117	Rrp1b	99	63.038	ENSSTOG00000011790	RRP1B	96	64.456	Ictidomys_tridecemlineatus
ENSMOCG00000001117	Rrp1b	52	43.609	ENSSTOG00000011116	RRP1	74	48.494	Ictidomys_tridecemlineatus
ENSMOCG00000001117	Rrp1b	100	60.586	ENSJJAG00000021279	Rrp1b	100	61.842	Jaculus_jaculus
ENSMOCG00000001117	Rrp1b	65	45.695	ENSKMAG00000005539	rrp1	51	41.787	Kryptolebias_marmoratus
ENSMOCG00000001117	Rrp1b	69	43.195	ENSLOCG00000004064	-	69	47.134	Lepisosteus_oculatus
ENSMOCG00000001117	Rrp1b	52	43.909	ENSLAFG00000022901	RRP1	75	47.774	Loxodonta_africana
ENSMOCG00000001117	Rrp1b	88	53.973	ENSLAFG00000000766	RRP1B	99	53.754	Loxodonta_africana
ENSMOCG00000001117	Rrp1b	100	62.760	ENSMFAG00000039152	RRP1B	100	62.630	Macaca_fascicularis
ENSMOCG00000001117	Rrp1b	100	60.026	ENSMMUG00000000104	RRP1B	100	59.896	Macaca_mulatta
ENSMOCG00000001117	Rrp1b	100	62.809	ENSMNEG00000034269	RRP1B	100	62.679	Macaca_nemestrina
ENSMOCG00000001117	Rrp1b	100	60.209	ENSMLEG00000040044	RRP1B	99	62.535	Mandrillus_leucophaeus
ENSMOCG00000001117	Rrp1b	100	79.512	ENSMAUG00000021508	Rrp1b	100	78.969	Mesocricetus_auratus
ENSMOCG00000001117	Rrp1b	100	62.368	ENSMICG00000004686	RRP1B	100	62.632	Microcebus_murinus
ENSMOCG00000001117	Rrp1b	100	53.010	ENSMODG00000021033	RRP1B	100	53.141	Monodelphis_domestica
ENSMOCG00000001117	Rrp1b	100	73.450	MGP_CAROLIEiJ_G0021376	Rrp1b	100	72.372	Mus_caroli
ENSMOCG00000001117	Rrp1b	100	74.730	ENSMUSG00000058392	Rrp1b	100	73.884	Mus_musculus
ENSMOCG00000001117	Rrp1b	54	50.209	MGP_PahariEiJ_G0030921	Rrp1	58	50.209	Mus_pahari
ENSMOCG00000001117	Rrp1b	100	74.397	MGP_PahariEiJ_G0023695	Rrp1b	100	73.324	Mus_pahari
ENSMOCG00000001117	Rrp1b	100	73.423	MGP_SPRETEiJ_G0022290	Rrp1b	100	72.581	Mus_spretus
ENSMOCG00000001117	Rrp1b	55	51.064	MGP_SPRETEiJ_G0016321	Rrp1	78	40.000	Mus_spretus
ENSMOCG00000001117	Rrp1b	83	52.139	ENSMPUG00000009810	RRP1B	99	52.848	Mustela_putorius_furo
ENSMOCG00000001117	Rrp1b	99	59.181	ENSMLUG00000007738	RRP1B	99	59.181	Myotis_lucifugus
ENSMOCG00000001117	Rrp1b	100	68.548	ENSNGAG00000021073	Rrp1b	100	68.145	Nannospalax_galili
ENSMOCG00000001117	Rrp1b	100	61.141	ENSNLEG00000001490	RRP1B	100	61.141	Nomascus_leucogenys
ENSMOCG00000001117	Rrp1b	71	77.778	ENSMEUG00000003226	-	64	77.778	Notamacropus_eugenii
ENSMOCG00000001117	Rrp1b	100	56.797	ENSODEG00000013177	RRP1B	100	55.855	Octodon_degus
ENSMOCG00000001117	Rrp1b	99	45.229	ENSOANG00000006470	RRP1B	99	44.792	Ornithorhynchus_anatinus
ENSMOCG00000001117	Rrp1b	94	50.568	ENSOCUG00000025931	RRP1B	100	50.142	Oryctolagus_cuniculus
ENSMOCG00000001117	Rrp1b	58	50.538	ENSORLG00020007199	-	53	51.613	Oryzias_latipes_hni
ENSMOCG00000001117	Rrp1b	63	45.528	ENSORLG00015004425	-	53	45.238	Oryzias_latipes_hsok
ENSMOCG00000001117	Rrp1b	63	47.967	ENSOMEG00000016910	-	55	55.056	Oryzias_melastigma
ENSMOCG00000001117	Rrp1b	69	80.952	ENSOGAG00000009872	RRP1B	86	80.952	Otolemur_garnettii
ENSMOCG00000001117	Rrp1b	94	56.067	ENSOARG00000011314	RRP1B	100	55.571	Ovis_aries
ENSMOCG00000001117	Rrp1b	94	61.978	ENSPPAG00000035319	RRP1B	99	61.752	Pan_paniscus
ENSMOCG00000001117	Rrp1b	100	56.026	ENSPPRG00000010356	RRP1B	100	55.333	Panthera_pardus
ENSMOCG00000001117	Rrp1b	53	44.332	ENSPPRG00000010656	RRP1	73	49.390	Panthera_pardus
ENSMOCG00000001117	Rrp1b	81	58.458	ENSPTIG00000016894	RRP1B	90	73.846	Panthera_tigris_altaica
ENSMOCG00000001117	Rrp1b	100	62.681	ENSPTRG00000013958	RRP1B	100	62.549	Pan_troglodytes
ENSMOCG00000001117	Rrp1b	100	63.206	ENSPANG00000011090	RRP1B	100	63.075	Papio_anubis
ENSMOCG00000001117	Rrp1b	63	52.101	ENSPKIG00000003422	-	57	52.101	Paramormyrops_kingsleyae
ENSMOCG00000001117	Rrp1b	100	79.223	ENSPEMG00000022490	Rrp1b	100	79.357	Peromyscus_maniculatus_bairdii
ENSMOCG00000001117	Rrp1b	62	45.322	ENSPCIG00000015523	-	81	50.923	Phascolarctos_cinereus
ENSMOCG00000001117	Rrp1b	100	54.086	ENSPCIG00000015513	RRP1B	100	54.498	Phascolarctos_cinereus
ENSMOCG00000001117	Rrp1b	51	40.365	ENSPLAG00000016684	-	50	42.029	Poecilia_latipinna
ENSMOCG00000001117	Rrp1b	67	49.254	ENSPMEG00000007042	-	59	45.161	Poecilia_mexicana
ENSMOCG00000001117	Rrp1b	72	47.727	ENSPREG00000015673	-	56	47.727	Poecilia_reticulata
ENSMOCG00000001117	Rrp1b	100	63.206	ENSPPYG00000011470	RRP1B	100	63.075	Pongo_abelii
ENSMOCG00000001117	Rrp1b	85	75.000	ENSPCAG00000013723	RRP1B	91	75.000	Procavia_capensis
ENSMOCG00000001117	Rrp1b	100	62.237	ENSPCOG00000017927	RRP1B	100	62.368	Propithecus_coquereli
ENSMOCG00000001117	Rrp1b	99	53.614	ENSPVAG00000001436	RRP1B	99	53.947	Pteropus_vampyrus
ENSMOCG00000001117	Rrp1b	100	75.603	ENSRNOG00000001194	Rrp1b	100	75.201	Rattus_norvegicus
ENSMOCG00000001117	Rrp1b	100	60.000	ENSRBIG00000041689	RRP1B	100	59.868	Rhinopithecus_bieti
ENSMOCG00000001117	Rrp1b	100	63.421	ENSRROG00000031499	RRP1B	100	63.289	Rhinopithecus_roxellana
ENSMOCG00000001117	Rrp1b	50	42.857	ENSSBOG00000034689	RRP1	71	50.610	Saimiri_boliviensis_boliviensis
ENSMOCG00000001117	Rrp1b	94	59.597	ENSSBOG00000034727	RRP1B	99	59.329	Saimiri_boliviensis_boliviensis
ENSMOCG00000001117	Rrp1b	100	53.655	ENSSHAG00000017789	RRP1B	100	53.655	Sarcophilus_harrisii
ENSMOCG00000001117	Rrp1b	64	47.059	ENSSMAG00000016847	-	81	43.119	Scophthalmus_maximus
ENSMOCG00000001117	Rrp1b	64	44.526	ENSSDUG00000000551	-	52	43.357	Seriola_dumerili
ENSMOCG00000001117	Rrp1b	63	45.669	ENSSLDG00000002538	-	52	43.357	Seriola_lalandi_dorsalis
ENSMOCG00000001117	Rrp1b	78	57.042	ENSSARG00000003108	-	60	69.048	Sorex_araneus
ENSMOCG00000001117	Rrp1b	100	42.092	ENSSPUG00000002834	RRP1B	100	42.018	Sphenodon_punctatus
ENSMOCG00000001117	Rrp1b	63	50.000	ENSSPAG00000005370	-	50	50.000	Stegastes_partitus
ENSMOCG00000001117	Rrp1b	100	51.720	ENSSSCG00000021698	RRP1B	100	52.249	Sus_scrofa
ENSMOCG00000001117	Rrp1b	60	46.392	ENSTNIG00000005053	rrp1	69	46.392	Tetraodon_nigroviridis
ENSMOCG00000001117	Rrp1b	78	66.017	ENSTBEG00000000422	RRP1B	93	71.987	Tupaia_belangeri
ENSMOCG00000001117	Rrp1b	100	54.293	ENSTTRG00000000723	RRP1B	100	54.605	Tursiops_truncatus
ENSMOCG00000001117	Rrp1b	100	57.048	ENSUAMG00000026765	RRP1B	100	55.191	Ursus_americanus
ENSMOCG00000001117	Rrp1b	64	77.778	ENSUMAG00000025510	RRP1B	92	76.984	Ursus_maritimus
ENSMOCG00000001117	Rrp1b	94	57.762	ENSVVUG00000024509	RRP1B	99	57.622	Vulpes_vulpes
ENSMOCG00000001117	Rrp1b	57	51.064	ENSXETG00000013683	rrp1b	63	51.064	Xenopus_tropicalis
ENSMOCG00000001117	Rrp1b	77	45.865	ENSXMAG00000023123	-	68	45.865	Xiphophorus_maculatus