EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000001340 (Gene tree)
Gene ID: 101984476
Gene Symbol: Gar1
Alias: C430047J18Rik|GAR1|Nola1
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 7048 bases
Position: chr21:25410392-25417439
Accession: 101984476
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000001726	Gar1	PF04410.14	2.1e-39	1	1
ENSMOCP00000001730	Gar1	PF04410.14	6.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000001807	-	1171	XM_005357273	ENSMOCP00000001726	220 (aa)	XP_005357330	UPI00038BE581
ENSMOCT00000001811	-	240	-	ENSMOCP00000001730	79 (aa)	-	-

Gene Model

Click here to download ENSMOCG00000001340's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000001340's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000001340	Gar1	70	100.000	ENSG00000109534	GAR1	50	95.413	Homo_sapiens
ENSMOCG00000001340	Gar1	70	98.182	ENSAPOG00000019754	gar1	67	85.211	Acanthochromis_polyacanthus
ENSMOCG00000001340	Gar1	70	100.000	ENSAMEG00000004605	GAR1	53	95.413	Ailuropoda_melanoleuca
ENSMOCG00000001340	Gar1	70	98.182	ENSAOCG00000020947	gar1	50	95.327	Amphiprion_ocellaris
ENSMOCG00000001340	Gar1	70	98.182	ENSAPEG00000001676	gar1	50	95.327	Amphiprion_percula
ENSMOCG00000001340	Gar1	70	98.182	ENSATEG00000003733	gar1	57	92.562	Anabas_testudineus
ENSMOCG00000001340	Gar1	70	92.727	ENSAPLG00000010926	GAR1	59	90.566	Anas_platyrhynchos
ENSMOCG00000001340	Gar1	70	94.545	ENSACAG00000010031	GAR1	50	91.509	Anolis_carolinensis
ENSMOCG00000001340	Gar1	70	100.000	ENSANAG00000021608	GAR1	50	95.413	Aotus_nancymaae
ENSMOCG00000001340	Gar1	81	96.875	ENSBTAG00000000748	GAR1	52	95.413	Bos_taurus
ENSMOCG00000001340	Gar1	70	100.000	ENSCJAG00000004041	GAR1	50	95.413	Callithrix_jacchus
ENSMOCG00000001340	Gar1	66	100.000	ENSCAFG00020015566	GAR1	57	96.330	Canis_lupus_dingo
ENSMOCG00000001340	Gar1	70	100.000	ENSCHIG00000016026	-	52	95.413	Capra_hircus
ENSMOCG00000001340	Gar1	52	97.561	ENSCHIG00000011049	-	55	82.569	Capra_hircus
ENSMOCG00000001340	Gar1	70	89.091	ENSTSYG00000026632	-	56	87.156	Carlito_syrichta
ENSMOCG00000001340	Gar1	99	93.590	ENSTSYG00000013668	-	51	95.413	Carlito_syrichta
ENSMOCG00000001340	Gar1	100	95.000	ENSCAPG00000014977	-	100	95.000	Cavia_aperea
ENSMOCG00000001340	Gar1	99	94.937	ENSCPOG00000004216	GAR1	50	95.413	Cavia_porcellus
ENSMOCG00000001340	Gar1	70	100.000	ENSCCAG00000029372	GAR1	50	95.413	Cebus_capucinus
ENSMOCG00000001340	Gar1	70	100.000	ENSCATG00000021854	GAR1	55	95.413	Cercocebus_atys
ENSMOCG00000001340	Gar1	100	96.250	ENSCLAG00000005335	GAR1	100	96.250	Chinchilla_lanigera
ENSMOCG00000001340	Gar1	66	100.000	ENSCSAG00000003922	GAR1	55	95.413	Chlorocebus_sabaeus
ENSMOCG00000001340	Gar1	70	96.364	ENSCPBG00000004310	GAR1	54	93.396	Chrysemys_picta_bellii
ENSMOCG00000001340	Gar1	63	74.000	ENSCING00000005744	-	52	65.714	Ciona_intestinalis
ENSMOCG00000001340	Gar1	70	98.182	ENSCANG00000039262	GAR1	50	94.495	Colobus_angolensis_palliatus
ENSMOCG00000001340	Gar1	99	96.154	ENSCGRG00001003919	Gar1	100	95.067	Cricetulus_griseus_chok1gshd
ENSMOCG00000001340	Gar1	99	96.154	ENSCGRG00000010165	-	94	95.833	Cricetulus_griseus_crigri
ENSMOCG00000001340	Gar1	70	96.364	ENSCVAG00000002103	gar1	60	90.400	Cyprinodon_variegatus
ENSMOCG00000001340	Gar1	70	96.364	ENSDARG00000076526	gar1	54	88.430	Danio_rerio
ENSMOCG00000001340	Gar1	99	94.872	ENSDNOG00000037632	GAR1	55	94.495	Dasypus_novemcinctus
ENSMOCG00000001340	Gar1	70	98.182	ENSDORG00000000482	Gar1	50	95.413	Dipodomys_ordii
ENSMOCG00000001340	Gar1	58	86.957	ENSEBUG00000011178	gar1	62	71.014	Eptatretus_burgeri
ENSMOCG00000001340	Gar1	70	100.000	ENSEASG00005004658	GAR1	50	97.248	Equus_asinus_asinus
ENSMOCG00000001340	Gar1	70	100.000	ENSECAG00000013624	GAR1	55	96.330	Equus_caballus
ENSMOCG00000001340	Gar1	70	100.000	ENSFCAG00000040791	-	52	96.330	Felis_catus
ENSMOCG00000001340	Gar1	65	52.941	ENSFCAG00000025841	-	57	61.345	Felis_catus
ENSMOCG00000001340	Gar1	100	96.250	ENSFDAG00000006333	-	100	96.250	Fukomys_damarensis
ENSMOCG00000001340	Gar1	70	94.545	ENSFHEG00000008068	gar1	63	84.328	Fundulus_heteroclitus
ENSMOCG00000001340	Gar1	67	98.113	ENSGAGG00000004393	GAR1	54	93.333	Gopherus_agassizii
ENSMOCG00000001340	Gar1	70	76.364	ENSGGOG00000036205	-	54	77.064	Gorilla_gorilla
ENSMOCG00000001340	Gar1	70	100.000	ENSGGOG00000008681	GAR1	50	96.330	Gorilla_gorilla
ENSMOCG00000001340	Gar1	99	93.590	ENSHGLG00000000493	GAR1	72	100.000	Heterocephalus_glaber_female
ENSMOCG00000001340	Gar1	66	100.000	ENSHGLG00100016873	-	72	100.000	Heterocephalus_glaber_male
ENSMOCG00000001340	Gar1	70	96.364	ENSIPUG00000003194	gar1	58	86.066	Ictalurus_punctatus
ENSMOCG00000001340	Gar1	70	96.364	ENSSTOG00000005577	GAR1	71	96.364	Ictidomys_tridecemlineatus
ENSMOCG00000001340	Gar1	70	96.364	ENSKMAG00000010402	gar1	51	93.458	Kryptolebias_marmoratus
ENSMOCG00000001340	Gar1	70	92.727	ENSLACG00000003306	GAR1	64	88.679	Latimeria_chalumnae
ENSMOCG00000001340	Gar1	72	78.947	ENSMFAG00000003572	-	53	80.734	Macaca_fascicularis
ENSMOCG00000001340	Gar1	70	100.000	ENSMFAG00000024592	GAR1	50	95.413	Macaca_fascicularis
ENSMOCG00000001340	Gar1	70	100.000	ENSMMUG00000021225	GAR1	50	95.413	Macaca_mulatta
ENSMOCG00000001340	Gar1	70	100.000	ENSMNEG00000042594	GAR1	50	95.413	Macaca_nemestrina
ENSMOCG00000001340	Gar1	70	100.000	ENSMLEG00000002496	GAR1	50	95.413	Mandrillus_leucophaeus
ENSMOCG00000001340	Gar1	100	97.468	ENSMAUG00000016788	Gar1	100	97.468	Mesocricetus_auratus
ENSMOCG00000001340	Gar1	70	98.182	ENSMICG00000003326	GAR1	50	94.495	Microcebus_murinus
ENSMOCG00000001340	Gar1	70	98.182	ENSMMOG00000004156	gar1	52	94.393	Mola_mola
ENSMOCG00000001340	Gar1	70	96.364	ENSMALG00000009672	gar1	62	87.218	Monopterus_albus
ENSMOCG00000001340	Gar1	100	98.734	MGP_CAROLIEiJ_G0025627	Gar1	100	98.734	Mus_caroli
ENSMOCG00000001340	Gar1	100	98.734	ENSMUSG00000028010	Gar1	100	98.734	Mus_musculus
ENSMOCG00000001340	Gar1	100	98.734	MGP_PahariEiJ_G0027076	Gar1	100	98.734	Mus_pahari
ENSMOCG00000001340	Gar1	100	98.734	MGP_SPRETEiJ_G0026580	Gar1	100	98.734	Mus_spretus
ENSMOCG00000001340	Gar1	70	100.000	ENSMPUG00000008615	GAR1	52	96.330	Mustela_putorius_furo
ENSMOCG00000001340	Gar1	70	98.182	ENSNGAG00000008268	Gar1	71	98.182	Nannospalax_galili
ENSMOCG00000001340	Gar1	71	78.571	ENSNLEG00000034282	-	55	79.817	Nomascus_leucogenys
ENSMOCG00000001340	Gar1	70	100.000	ENSNLEG00000016578	GAR1	50	95.413	Nomascus_leucogenys
ENSMOCG00000001340	Gar1	99	96.203	ENSODEG00000011083	GAR1	56	95.413	Octodon_degus
ENSMOCG00000001340	Gar1	70	100.000	ENSOCUG00000003901	GAR1	51	94.495	Oryctolagus_cuniculus
ENSMOCG00000001340	Gar1	99	92.308	ENSOGAG00000004693	GAR1	51	94.495	Otolemur_garnettii
ENSMOCG00000001340	Gar1	81	96.875	ENSOARG00000004910	GAR1	52	95.413	Ovis_aries
ENSMOCG00000001340	Gar1	99	94.872	ENSPPAG00000014081	GAR1	55	95.413	Pan_paniscus
ENSMOCG00000001340	Gar1	70	100.000	ENSPPRG00000023697	GAR1	52	96.330	Panthera_pardus
ENSMOCG00000001340	Gar1	70	100.000	ENSPTIG00000021565	GAR1	52	96.330	Panthera_tigris_altaica
ENSMOCG00000001340	Gar1	70	100.000	ENSPTRG00000016364	GAR1	55	95.413	Pan_troglodytes
ENSMOCG00000001340	Gar1	70	80.000	ENSPTRG00000049340	-	76	71.975	Pan_troglodytes
ENSMOCG00000001340	Gar1	72	78.947	ENSPANG00000033062	-	68	69.277	Papio_anubis
ENSMOCG00000001340	Gar1	70	100.000	ENSPANG00000000639	GAR1	50	95.413	Papio_anubis
ENSMOCG00000001340	Gar1	100	97.468	ENSPEMG00000015838	Gar1	100	97.468	Peromyscus_maniculatus_bairdii
ENSMOCG00000001340	Gar1	70	96.364	ENSPFOG00000024155	gar1	70	84.354	Poecilia_formosa
ENSMOCG00000001340	Gar1	70	96.364	ENSPLAG00000015056	gar1	70	84.354	Poecilia_latipinna
ENSMOCG00000001340	Gar1	70	96.364	ENSPMEG00000009320	gar1	70	85.034	Poecilia_mexicana
ENSMOCG00000001340	Gar1	70	96.364	ENSPREG00000010377	gar1	64	82.550	Poecilia_reticulata
ENSMOCG00000001340	Gar1	70	100.000	ENSPPYG00000014996	GAR1	50	95.413	Pongo_abelii
ENSMOCG00000001340	Gar1	66	100.000	ENSPCOG00000027049	GAR1	56	95.413	Propithecus_coquereli
ENSMOCG00000001340	Gar1	71	100.000	ENSRNOG00000061146	Gar1	64	98.165	Rattus_norvegicus
ENSMOCG00000001340	Gar1	71	76.786	ENSRBIG00000042411	-	53	79.817	Rhinopithecus_bieti
ENSMOCG00000001340	Gar1	70	100.000	ENSRBIG00000019547	GAR1	55	95.413	Rhinopithecus_bieti
ENSMOCG00000001340	Gar1	71	76.786	ENSRROG00000044348	-	52	79.817	Rhinopithecus_roxellana
ENSMOCG00000001340	Gar1	70	100.000	ENSRROG00000028454	GAR1	55	95.413	Rhinopithecus_roxellana
ENSMOCG00000001340	Gar1	70	100.000	ENSSBOG00000024785	GAR1	50	95.413	Saimiri_boliviensis_boliviensis
ENSMOCG00000001340	Gar1	70	96.364	ENSSMAG00000009976	gar1	57	88.710	Scophthalmus_maximus
ENSMOCG00000001340	Gar1	70	98.182	ENSSLDG00000023264	gar1	50	94.393	Seriola_lalandi_dorsalis
ENSMOCG00000001340	Gar1	70	96.364	ENSSPUG00000008707	GAR1	59	94.340	Sphenodon_punctatus
ENSMOCG00000001340	Gar1	70	98.182	ENSSPAG00000005974	gar1	50	93.860	Stegastes_partitus
ENSMOCG00000001340	Gar1	70	100.000	ENSSSCG00000009137	GAR1	54	95.413	Sus_scrofa
ENSMOCG00000001340	Gar1	70	94.545	ENSTGUG00000004185	GAR1	90	81.061	Taeniopygia_guttata
ENSMOCG00000001340	Gar1	70	90.909	ENSTRUG00000020580	gar1	51	91.589	Takifugu_rubripes
ENSMOCG00000001340	Gar1	84	83.333	ENSTNIG00000013023	gar1	61	94.393	Tetraodon_nigroviridis
ENSMOCG00000001340	Gar1	66	100.000	ENSUAMG00000005652	GAR1	57	96.330	Ursus_americanus
ENSMOCG00000001340	Gar1	70	100.000	ENSUMAG00000000776	GAR1	53	96.330	Ursus_maritimus
ENSMOCG00000001340	Gar1	70	100.000	ENSVVUG00000017612	GAR1	56	96.330	Vulpes_vulpes