EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000001536 (Gene tree)
Gene ID: 101992071
Gene Symbol: -
Alias: -
Full Name: splicing regulatory glutamic acid and lysine rich protein 1
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 35649 bases
Position: chrJH996441.1:3340088-3375736
Accession: 101992071
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000001973	RRM_1	PF00076.22	5e-22	1	2
ENSMOCP00000001973	RRM_1	PF00076.22	5e-22	2	2
ENSMOCP00000001974	RRM_1	PF00076.22	1.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000002076	-	4526	-	ENSMOCP00000001974	320 (aa)	-	-
ENSMOCT00000002075	-	4263	XM_005366573	ENSMOCP00000001973	610 (aa)	XP_005366630	UPI00038BB304

Gene Model

Click here to download ENSMOCG00000001536's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000001536's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000001536	-	87	96.029	ENSG00000153914	SREK1	98	94.898	Homo_sapiens
ENSMOCG00000001536	-	71	69.298	ENSAPOG00000023618	srek1	50	75.000	Acanthochromis_polyacanthus
ENSMOCG00000001536	-	97	88.322	ENSAMEG00000011327	SREK1	96	87.213	Ailuropoda_melanoleuca
ENSMOCG00000001536	-	56	75.135	ENSACIG00000015041	srek1	95	75.138	Amphilophus_citrinellus
ENSMOCG00000001536	-	71	69.912	ENSAOCG00000024379	srek1	50	75.000	Amphiprion_ocellaris
ENSMOCG00000001536	-	84	63.806	ENSATEG00000009450	srek1	50	76.238	Anabas_testudineus
ENSMOCG00000001536	-	79	88.142	ENSAPLG00000003948	-	84	89.150	Anas_platyrhynchos
ENSMOCG00000001536	-	97	87.377	ENSANAG00000031358	SREK1	92	91.758	Aotus_nancymaae
ENSMOCG00000001536	-	56	78.333	ENSACLG00000026754	srek1	94	80.783	Astatotilapia_calliptera
ENSMOCG00000001536	-	57	77.005	ENSAMXG00000043877	srek1	57	78.966	Astyanax_mexicanus
ENSMOCG00000001536	-	97	87.255	ENSBTAG00000007321	SREK1	96	87.092	Bos_taurus
ENSMOCG00000001536	-	100	92.500	ENSCJAG00000015950	SREK1	92	91.758	Callithrix_jacchus
ENSMOCG00000001536	-	97	88.284	ENSCAFG00000007560	SREK1	98	86.364	Canis_familiaris
ENSMOCG00000001536	-	55	93.750	ENSCAFG00020019448	-	89	93.750	Canis_lupus_dingo
ENSMOCG00000001536	-	97	88.197	ENSTSYG00000036957	SREK1	98	95.918	Carlito_syrichta
ENSMOCG00000001536	-	87	96.751	ENSCPOG00000008925	SREK1	96	78.849	Cavia_porcellus
ENSMOCG00000001536	-	100	92.500	ENSCCAG00000020591	SREK1	98	86.078	Cebus_capucinus
ENSMOCG00000001536	-	97	86.634	ENSCATG00000031482	SREK1	98	94.898	Cercocebus_atys
ENSMOCG00000001536	-	97	89.492	ENSCLAG00000005024	SREK1	96	89.696	Chinchilla_lanigera
ENSMOCG00000001536	-	65	86.607	ENSCHOG00000004956	SREK1	64	85.761	Choloepus_hoffmanni
ENSMOCG00000001536	-	60	93.264	ENSCPBG00000026866	SREK1	87	91.809	Chrysemys_picta_bellii
ENSMOCG00000001536	-	87	96.390	ENSCANG00000030421	SREK1	98	94.898	Colobus_angolensis_palliatus
ENSMOCG00000001536	-	100	98.438	ENSCGRG00001015222	-	99	97.199	Cricetulus_griseus_chok1gshd
ENSMOCG00000001536	-	100	98.438	ENSCGRG00000002130	-	99	97.199	Cricetulus_griseus_crigri
ENSMOCG00000001536	-	56	76.667	ENSCVAG00000002411	srek1	84	76.111	Cyprinodon_variegatus
ENSMOCG00000001536	-	58	74.595	ENSDARG00000009764	srek1	54	77.739	Danio_rerio
ENSMOCG00000001536	-	83	96.629	ENSDNOG00000010327	SREK1	96	87.459	Dasypus_novemcinctus
ENSMOCG00000001536	-	57	95.604	ENSDORG00000023425	-	92	91.758	Dipodomys_ordii
ENSMOCG00000001536	-	79	94.466	ENSETEG00000012977	SREK1	85	81.633	Echinops_telfairi
ENSMOCG00000001536	-	57	96.703	ENSEASG00005006829	-	92	96.703	Equus_asinus_asinus
ENSMOCG00000001536	-	57	96.703	ENSECAG00000036994	-	92	96.703	Equus_caballus
ENSMOCG00000001536	-	57	71.123	ENSELUG00000008230	srek1	60	68.169	Esox_lucius
ENSMOCG00000001536	-	87	96.390	ENSFCAG00000040658	-	98	86.166	Felis_catus
ENSMOCG00000001536	-	97	89.562	ENSFDAG00000017844	SREK1	96	90.909	Fukomys_damarensis
ENSMOCG00000001536	-	81	91.473	ENSGAGG00000006087	SREK1	94	90.909	Gopherus_agassizii
ENSMOCG00000001536	-	97	86.634	ENSGGOG00000004737	SREK1	98	94.898	Gorilla_gorilla
ENSMOCG00000001536	-	56	78.333	ENSHBUG00000007057	srek1	95	76.667	Haplochromis_burtoni
ENSMOCG00000001536	-	97	88.475	ENSHGLG00000001181	SREK1	96	88.176	Heterocephalus_glaber_female
ENSMOCG00000001536	-	76	97.107	ENSHGLG00100003207	SREK1	98	82.422	Heterocephalus_glaber_male
ENSMOCG00000001536	-	65	66.509	ENSHCOG00000017240	SREK1	52	73.889	Hippocampus_comes
ENSMOCG00000001536	-	84	61.940	ENSIPUG00000016851	srek1	56	66.474	Ictalurus_punctatus
ENSMOCG00000001536	-	97	94.822	ENSSTOG00000008850	SREK1	96	91.582	Ictidomys_tridecemlineatus
ENSMOCG00000001536	-	57	95.055	ENSJJAG00000000214	-	92	91.209	Jaculus_jaculus
ENSMOCG00000001536	-	58	74.194	ENSLBEG00000022980	srek1	92	73.656	Labrus_bergylta
ENSMOCG00000001536	-	97	89.207	ENSLAFG00000013853	SREK1	96	89.376	Loxodonta_africana
ENSMOCG00000001536	-	97	86.634	ENSMFAG00000039823	SREK1	98	94.898	Macaca_fascicularis
ENSMOCG00000001536	-	97	86.634	ENSMMUG00000014586	SREK1	94	92.334	Macaca_mulatta
ENSMOCG00000001536	-	97	86.634	ENSMNEG00000030723	SREK1	98	94.898	Macaca_nemestrina
ENSMOCG00000001536	-	97	86.469	ENSMLEG00000039078	SREK1	98	94.898	Mandrillus_leucophaeus
ENSMOCG00000001536	-	56	78.333	ENSMZEG00005005719	srek1	95	76.667	Maylandia_zebra
ENSMOCG00000001536	-	58	83.957	ENSMGAG00000002047	SREK1	92	74.793	Meleagris_gallopavo
ENSMOCG00000001536	-	100	97.500	ENSMAUG00000010066	-	100	97.500	Mesocricetus_auratus
ENSMOCG00000001536	-	100	91.875	ENSMICG00000034959	SREK1	92	91.758	Microcebus_murinus
ENSMOCG00000001536	-	56	74.317	ENSMMOG00000008409	srek1	89	75.556	Mola_mola
ENSMOCG00000001536	-	100	86.562	ENSMODG00000019665	SREK1	97	81.072	Monodelphis_domestica
ENSMOCG00000001536	-	93	52.199	ENSMALG00000017086	srek1	91	92.593	Monopterus_albus
ENSMOCG00000001536	-	100	85.632	ENSMPUG00000014736	SREK1	96	87.624	Mustela_putorius_furo
ENSMOCG00000001536	-	84	96.642	ENSMLUG00000014801	SREK1	98	84.375	Myotis_lucifugus
ENSMOCG00000001536	-	57	99.451	ENSNGAG00000017527	-	92	99.451	Nannospalax_galili
ENSMOCG00000001536	-	56	77.222	ENSNBRG00000010718	srek1	95	77.222	Neolamprologus_brichardi
ENSMOCG00000001536	-	97	86.799	ENSNLEG00000003827	SREK1	98	94.898	Nomascus_leucogenys
ENSMOCG00000001536	-	96	85.976	ENSOPRG00000012111	SREK1	96	85.874	Ochotona_princeps
ENSMOCG00000001536	-	79	97.638	ENSODEG00000016450	SREK1	95	86.105	Octodon_degus
ENSMOCG00000001536	-	58	75.543	ENSONIG00000011080	srek1	65	80.000	Oreochromis_niloticus
ENSMOCG00000001536	-	76	90.574	ENSOANG00000005029	SREK1	99	77.801	Ornithorhynchus_anatinus
ENSMOCG00000001536	-	97	88.372	ENSOCUG00000001319	SREK1	96	88.186	Oryctolagus_cuniculus
ENSMOCG00000001536	-	56	77.049	ENSORLG00015020471	srek1	92	76.923	Oryzias_latipes_hsok
ENSMOCG00000001536	-	57	77.049	ENSOMEG00000015817	srek1	56	69.858	Oryzias_melastigma
ENSMOCG00000001536	-	98	92.381	ENSOGAG00000016463	SREK1	98	85.600	Otolemur_garnettii
ENSMOCG00000001536	-	87	96.029	ENSOARG00000006005	SREK1	96	86.601	Ovis_aries
ENSMOCG00000001536	-	97	79.043	ENSPPAG00000031605	SREK1	91	94.949	Pan_paniscus
ENSMOCG00000001536	-	97	89.238	ENSPPRG00000024617	SREK1	98	87.103	Panthera_pardus
ENSMOCG00000001536	-	97	87.459	ENSPTIG00000006608	SREK1	96	87.294	Panthera_tigris_altaica
ENSMOCG00000001536	-	97	86.469	ENSPTRG00000016936	SREK1	98	94.898	Pan_troglodytes
ENSMOCG00000001536	-	97	86.634	ENSPANG00000008953	SREK1	98	94.898	Papio_anubis
ENSMOCG00000001536	-	57	73.077	ENSPMGG00000017031	srek1	96	71.196	Periophthalmus_magnuspinnatus
ENSMOCG00000001536	-	100	95.625	ENSPEMG00000024051	-	100	95.625	Peromyscus_maniculatus_bairdii
ENSMOCG00000001536	-	57	94.505	ENSPCIG00000017750	-	92	91.758	Phascolarctos_cinereus
ENSMOCG00000001536	-	56	76.111	ENSPLAG00000008827	srek1	98	75.556	Poecilia_latipinna
ENSMOCG00000001536	-	55	75.000	ENSPREG00000019912	srek1	98	74.432	Poecilia_reticulata
ENSMOCG00000001536	-	97	86.799	ENSPPYG00000015515	SREK1	96	87.049	Pongo_abelii
ENSMOCG00000001536	-	79	97.628	ENSPCAG00000004955	SREK1	99	80.526	Procavia_capensis
ENSMOCG00000001536	-	100	91.875	ENSPCOG00000026230	SREK1	98	95.918	Propithecus_coquereli
ENSMOCG00000001536	-	97	85.621	ENSPVAG00000009763	SREK1	97	85.621	Pteropus_vampyrus
ENSMOCG00000001536	-	72	71.795	ENSPNAG00000004328	srek1	57	81.119	Pygocentrus_nattereri
ENSMOCG00000001536	-	88	95.745	ENSRBIG00000033818	SREK1	98	94.898	Rhinopithecus_bieti
ENSMOCG00000001536	-	97	86.634	ENSRROG00000017210	SREK1	98	94.898	Rhinopithecus_roxellana
ENSMOCG00000001536	-	100	92.812	ENSSBOG00000031230	SREK1	92	91.758	Saimiri_boliviensis_boliviensis
ENSMOCG00000001536	-	100	85.404	ENSSHAG00000003514	SREK1	99	78.112	Sarcophilus_harrisii
ENSMOCG00000001536	-	84	58.389	ENSSMAG00000011808	srek1	58	80.851	Scophthalmus_maximus
ENSMOCG00000001536	-	78	94.800	ENSSARG00000000795	SREK1	74	92.179	Sorex_araneus
ENSMOCG00000001536	-	57	90.110	ENSSPUG00000016553	SREK1	90	90.780	Sphenodon_punctatus
ENSMOCG00000001536	-	56	76.111	ENSSPAG00000022298	srek1	97	76.111	Stegastes_partitus
ENSMOCG00000001536	-	87	95.668	ENSSSCG00000032726	SREK1	98	84.570	Sus_scrofa
ENSMOCG00000001536	-	98	74.613	ENSTGUG00000002935	SREK1	98	70.414	Taeniopygia_guttata
ENSMOCG00000001536	-	56	75.556	ENSTRUG00000002960	srek1	94	72.778	Takifugu_rubripes
ENSMOCG00000001536	-	94	59.868	ENSTNIG00000013463	srek1	68	77.739	Tetraodon_nigroviridis
ENSMOCG00000001536	-	87	95.307	ENSTTRG00000009684	SREK1	99	85.889	Tursiops_truncatus
ENSMOCG00000001536	-	57	95.604	ENSUAMG00000022661	-	92	91.758	Ursus_americanus
ENSMOCG00000001536	-	97	87.829	ENSUMAG00000008191	SREK1	96	86.482	Ursus_maritimus
ENSMOCG00000001536	-	97	92.903	ENSVPAG00000008654	SREK1	99	86.620	Vicugna_pacos
ENSMOCG00000001536	-	51	97.531	ENSVVUG00000005890	-	89	93.750	Vulpes_vulpes
ENSMOCG00000001536	-	92	67.628	ENSXETG00000021460	srek1	98	63.620	Xenopus_tropicalis
ENSMOCG00000001536	-	56	76.243	ENSXCOG00000017793	srek1	95	75.556	Xiphophorus_couchianus