EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000001545 (Gene tree)
Gene ID: 101996490
Gene Symbol: Rpl39l
Alias: 4930517K11Rik
Full Name: 60S ribosomal protein L39-like
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 156 bases
Position: chr7:11265268-11265423
Accession: 101996490
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000001978	Ribosomal_L39	PF00832.20	1.7e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000002081	-	156	XM_013347174	ENSMOCP00000001978	51 (aa)	XP_013202628	UPI00038BDC0C

Gene Model

Click here to download ENSMOCG00000001545's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000001545's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000001545	Rpl39l	100	90.196	ENSMOCG00000003914	-	100	90.196
ENSMOCG00000001545	Rpl39l	92	91.489	ENSMOCG00000008820	-	100	91.489
ENSMOCG00000001545	Rpl39l	100	86.275	ENSMOCG00000005250	-	100	86.275
ENSMOCG00000001545	Rpl39l	100	90.196	ENSMOCG00000010499	-	100	90.196
ENSMOCG00000001545	Rpl39l	100	88.235	ENSMOCG00000001977	-	100	88.235
ENSMOCG00000001545	Rpl39l	100	88.235	ENSMOCG00000006299	-	100	88.235
ENSMOCG00000001545	Rpl39l	100	86.275	ENSMOCG00000005535	-	100	86.275
ENSMOCG00000001545	Rpl39l	100	92.157	ENSMOCG00000002138	-	100	92.157
ENSMOCG00000001545	Rpl39l	100	88.235	ENSMOCG00000002794	-	100	88.235

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000001545	Rpl39l	100	92.157	ENSAMEG00000019848	-	100	92.157	Ailuropoda_melanoleuca
ENSMOCG00000001545	Rpl39l	100	90.196	ENSANAG00000016046	-	100	90.196	Aotus_nancymaae
ENSMOCG00000001545	Rpl39l	100	92.157	ENSANAG00000031418	-	100	92.157	Aotus_nancymaae
ENSMOCG00000001545	Rpl39l	100	86.275	ENSANAG00000016436	-	100	86.275	Aotus_nancymaae
ENSMOCG00000001545	Rpl39l	100	90.196	ENSCAFG00020009904	-	100	90.196	Canis_lupus_dingo
ENSMOCG00000001545	Rpl39l	100	90.196	ENSCAFG00020026664	-	100	90.196	Canis_lupus_dingo
ENSMOCG00000001545	Rpl39l	100	84.314	ENSCAFG00020027515	-	100	84.314	Canis_lupus_dingo
ENSMOCG00000001545	Rpl39l	100	88.235	ENSCAFG00020023883	-	100	88.235	Canis_lupus_dingo
ENSMOCG00000001545	Rpl39l	100	88.235	ENSCAFG00020002578	-	100	88.235	Canis_lupus_dingo
ENSMOCG00000001545	Rpl39l	100	90.196	ENSTSYG00000026785	-	100	90.196	Carlito_syrichta
ENSMOCG00000001545	Rpl39l	90	84.783	ENSTSYG00000026787	-	82	84.783	Carlito_syrichta
ENSMOCG00000001545	Rpl39l	100	92.157	ENSCAPG00000007210	-	100	92.157	Cavia_aperea
ENSMOCG00000001545	Rpl39l	100	92.157	ENSCPOG00000036636	-	100	92.157	Cavia_porcellus
ENSMOCG00000001545	Rpl39l	100	90.196	ENSCLAG00000017874	-	100	90.196	Chinchilla_lanigera
ENSMOCG00000001545	Rpl39l	100	86.275	ENSCLAG00000017707	-	100	86.275	Chinchilla_lanigera
ENSMOCG00000001545	Rpl39l	100	94.118	ENSCGRG00001003230	Rpl39l	100	94.118	Cricetulus_griseus_chok1gshd
ENSMOCG00000001545	Rpl39l	100	88.235	ENSCGRG00001012052	-	100	88.235	Cricetulus_griseus_chok1gshd
ENSMOCG00000001545	Rpl39l	100	80.392	ENSCGRG00001008057	-	100	80.392	Cricetulus_griseus_chok1gshd
ENSMOCG00000001545	Rpl39l	100	88.235	ENSCGRG00000019654	-	100	88.235	Cricetulus_griseus_crigri
ENSMOCG00000001545	Rpl39l	100	94.118	ENSCGRG00000018615	Rpl39l	100	94.118	Cricetulus_griseus_crigri
ENSMOCG00000001545	Rpl39l	100	88.235	ENSDORG00000027732	-	100	88.235	Dipodomys_ordii
ENSMOCG00000001545	Rpl39l	100	90.196	ENSDORG00000028485	-	100	90.196	Dipodomys_ordii
ENSMOCG00000001545	Rpl39l	100	76.471	ENSFCAG00000044333	RPL39L	100	76.471	Felis_catus
ENSMOCG00000001545	Rpl39l	100	67.308	ENSFCAG00000038709	-	91	67.308	Felis_catus
ENSMOCG00000001545	Rpl39l	100	92.157	ENSFDAG00000021400	-	100	92.157	Fukomys_damarensis
ENSMOCG00000001545	Rpl39l	92	87.234	ENSGGOG00000040312	-	65	87.234	Gorilla_gorilla
ENSMOCG00000001545	Rpl39l	100	84.314	ENSGGOG00000036596	-	100	84.314	Gorilla_gorilla
ENSMOCG00000001545	Rpl39l	100	90.196	ENSHGLG00000020604	-	100	90.196	Heterocephalus_glaber_female
ENSMOCG00000001545	Rpl39l	100	90.196	ENSHGLG00100011216	-	100	90.196	Heterocephalus_glaber_male
ENSMOCG00000001545	Rpl39l	100	90.196	ENSSTOG00000028051	-	100	90.196	Ictidomys_tridecemlineatus
ENSMOCG00000001545	Rpl39l	100	92.157	ENSSTOG00000030492	-	100	92.157	Ictidomys_tridecemlineatus
ENSMOCG00000001545	Rpl39l	100	84.314	ENSJJAG00000010041	-	100	84.314	Jaculus_jaculus
ENSMOCG00000001545	Rpl39l	100	88.235	ENSLAFG00000028648	-	100	88.235	Loxodonta_africana
ENSMOCG00000001545	Rpl39l	100	90.196	ENSMFAG00000020492	-	100	90.196	Macaca_fascicularis
ENSMOCG00000001545	Rpl39l	100	90.196	ENSMMUG00000045452	-	100	90.196	Macaca_mulatta
ENSMOCG00000001545	Rpl39l	100	88.235	ENSMMUG00000038479	-	100	88.235	Macaca_mulatta
ENSMOCG00000001545	Rpl39l	100	92.157	ENSMMUG00000044527	-	100	92.157	Macaca_mulatta
ENSMOCG00000001545	Rpl39l	100	90.196	ENSMNEG00000000126	-	100	90.196	Macaca_nemestrina
ENSMOCG00000001545	Rpl39l	100	84.314	ENSMNEG00000001683	-	68	84.314	Macaca_nemestrina
ENSMOCG00000001545	Rpl39l	100	92.157	ENSMLEG00000003517	-	100	92.157	Mandrillus_leucophaeus
ENSMOCG00000001545	Rpl39l	100	90.196	ENSMLEG00000018088	-	100	90.196	Mandrillus_leucophaeus
ENSMOCG00000001545	Rpl39l	100	86.275	ENSMLEG00000009433	-	100	86.275	Mandrillus_leucophaeus
ENSMOCG00000001545	Rpl39l	98	90.000	ENSMLEG00000000739	-	100	90.000	Mandrillus_leucophaeus
ENSMOCG00000001545	Rpl39l	100	94.118	ENSMAUG00000015776	Rpl39l	100	94.118	Mesocricetus_auratus
ENSMOCG00000001545	Rpl39l	100	86.275	ENSMAUG00000002516	-	100	86.275	Mesocricetus_auratus
ENSMOCG00000001545	Rpl39l	100	96.078	MGP_CAROLIEiJ_G0020438	Rpl39l	100	96.078	Mus_caroli
ENSMOCG00000001545	Rpl39l	100	96.078	ENSMUSG00000039209	Rpl39l	100	96.078	Mus_musculus
ENSMOCG00000001545	Rpl39l	100	96.078	MGP_SPRETEiJ_G0021332	Rpl39l	100	96.078	Mus_spretus
ENSMOCG00000001545	Rpl39l	100	86.275	ENSMLUG00000025012	-	100	86.275	Myotis_lucifugus
ENSMOCG00000001545	Rpl39l	100	86.275	ENSMLUG00000015029	-	100	86.275	Myotis_lucifugus
ENSMOCG00000001545	Rpl39l	100	90.196	ENSNGAG00000012570	Rpl39l	100	90.196	Nannospalax_galili
ENSMOCG00000001545	Rpl39l	100	82.353	ENSNGAG00000008665	-	100	82.353	Nannospalax_galili
ENSMOCG00000001545	Rpl39l	90	84.783	ENSNGAG00000022494	-	96	84.783	Nannospalax_galili
ENSMOCG00000001545	Rpl39l	100	90.196	ENSODEG00000020114	-	100	90.196	Octodon_degus
ENSMOCG00000001545	Rpl39l	100	88.235	ENSOGAG00000024799	-	100	88.235	Otolemur_garnettii
ENSMOCG00000001545	Rpl39l	100	82.353	ENSPPRG00000020779	-	100	82.353	Panthera_pardus
ENSMOCG00000001545	Rpl39l	100	84.314	ENSPTIG00000006209	-	100	84.314	Panthera_tigris_altaica
ENSMOCG00000001545	Rpl39l	98	90.000	ENSPANG00000030226	-	100	90.000	Papio_anubis
ENSMOCG00000001545	Rpl39l	100	96.078	ENSRNOG00000032300	Rpl39l	100	96.078	Rattus_norvegicus
ENSMOCG00000001545	Rpl39l	100	90.196	ENSRBIG00000010842	-	100	90.196	Rhinopithecus_bieti
ENSMOCG00000001545	Rpl39l	100	90.196	ENSRROG00000023025	-	100	90.196	Rhinopithecus_roxellana
ENSMOCG00000001545	Rpl39l	100	90.196	ENSRROG00000037724	-	100	90.196	Rhinopithecus_roxellana
ENSMOCG00000001545	Rpl39l	100	80.392	ENSSSCG00000033224	-	100	80.392	Sus_scrofa
ENSMOCG00000001545	Rpl39l	100	86.275	ENSSSCG00000038385	-	69	86.275	Sus_scrofa
ENSMOCG00000001545	Rpl39l	100	92.157	ENSUAMG00000020990	-	100	92.157	Ursus_americanus
ENSMOCG00000001545	Rpl39l	90	86.957	ENSUAMG00000000067	-	98	86.957	Ursus_americanus
ENSMOCG00000001545	Rpl39l	100	92.157	ENSUMAG00000015280	-	100	92.157	Ursus_maritimus
ENSMOCG00000001545	Rpl39l	100	92.157	ENSVVUG00000030147	-	100	92.157	Vulpes_vulpes
ENSMOCG00000001545	Rpl39l	98	88.000	ENSVVUG00000022951	-	100	88.000	Vulpes_vulpes
ENSMOCG00000001545	Rpl39l	100	82.353	ENSVVUG00000014095	-	100	82.353	Vulpes_vulpes