EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000001554 (Gene tree)
Gene ID: 101996010
Gene Symbol: Pabpc5
Alias: -
Full Name: poly(A) binding protein cytoplasmic 5
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 1987 bases
Position: chrJH996485.1:2527710-2529696
Accession: 101996010
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000001991	RRM_5	PF13893.6	4.4e-14	1	2
ENSMOCP00000001991	RRM_5	PF13893.6	4.4e-14	2	2
ENSMOCP00000001991	RRM_1	PF00076.22	2.5e-77	1	4
ENSMOCP00000001991	RRM_1	PF00076.22	2.5e-77	2	4
ENSMOCP00000001991	RRM_1	PF00076.22	2.5e-77	3	4
ENSMOCP00000001991	RRM_1	PF00076.22	2.5e-77	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000002096	-	1476	XM_005369613	ENSMOCP00000001991	382 (aa)	XP_005369670	UPI00038C223E

Gene Model

Click here to download ENSMOCG00000001554's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000001554's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000001554	Pabpc5	94	38.272	ENSMOCG00000016960	Elavl2	86	38.272
ENSMOCG00000001554	Pabpc5	68	33.333	ENSMOCG00000002573	Celf6	58	33.333
ENSMOCG00000001554	Pabpc5	53	35.354	ENSMOCG00000006917	-	54	35.354
ENSMOCG00000001554	Pabpc5	87	66.667	ENSMOCG00000018191	-	64	66.667
ENSMOCG00000001554	Pabpc5	67	35.616	ENSMOCG00000011985	Celf4	56	35.616
ENSMOCG00000001554	Pabpc5	95	57.778	ENSMOCG00000013186	Pabpc1l	63	57.865
ENSMOCG00000001554	Pabpc5	95	65.014	ENSMOCG00000004921	-	58	65.169
ENSMOCG00000001554	Pabpc5	95	60.165	ENSMOCG00000007551	Pabpc4l	97	60.784
ENSMOCG00000001554	Pabpc5	94	30.256	ENSMOCG00000014588	Elavl1	96	30.256
ENSMOCG00000001554	Pabpc5	93	34.568	ENSMOCG00000001878	Celf3	59	35.616
ENSMOCG00000001554	Pabpc5	95	67.493	ENSMOCG00000006763	Pabpc4	59	67.697
ENSMOCG00000001554	Pabpc5	95	61.667	ENSMOCG00000001354	Pabpc2	60	61.517

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000001554	Pabpc5	99	95.538	ENSG00000174740	PABPC5	99	95.538	Homo_sapiens
ENSMOCG00000001554	Pabpc5	99	95.538	ENSAMEG00000020114	PABPC5	100	95.538	Ailuropoda_melanoleuca
ENSMOCG00000001554	Pabpc5	99	95.538	ENSANAG00000005063	PABPC5	99	95.538	Aotus_nancymaae
ENSMOCG00000001554	Pabpc5	100	94.764	ENSBTAG00000019942	PABPC5	100	94.764	Bos_taurus
ENSMOCG00000001554	Pabpc5	99	95.013	ENSCJAG00000003665	PABPC5	99	95.013	Callithrix_jacchus
ENSMOCG00000001554	Pabpc5	100	95.288	ENSCAFG00000017452	PABPC5	100	95.288	Canis_familiaris
ENSMOCG00000001554	Pabpc5	100	95.288	ENSCHIG00000019004	PABPC5	100	95.288	Capra_hircus
ENSMOCG00000001554	Pabpc5	100	95.288	ENSTSYG00000036351	PABPC5	100	95.288	Carlito_syrichta
ENSMOCG00000001554	Pabpc5	99	85.340	ENSCAPG00000010714	PABPC5	100	85.340	Cavia_aperea
ENSMOCG00000001554	Pabpc5	100	92.147	ENSCPOG00000002555	PABPC5	100	92.147	Cavia_porcellus
ENSMOCG00000001554	Pabpc5	99	95.538	ENSCCAG00000032154	PABPC5	99	95.538	Cebus_capucinus
ENSMOCG00000001554	Pabpc5	99	95.801	ENSCATG00000043083	PABPC5	99	95.801	Cercocebus_atys
ENSMOCG00000001554	Pabpc5	100	93.717	ENSCLAG00000000647	PABPC5	100	93.717	Chinchilla_lanigera
ENSMOCG00000001554	Pabpc5	99	95.801	ENSCSAG00000000065	PABPC5	99	95.801	Chlorocebus_sabaeus
ENSMOCG00000001554	Pabpc5	99	95.801	ENSCANG00000011473	PABPC5	99	95.801	Colobus_angolensis_palliatus
ENSMOCG00000001554	Pabpc5	100	93.717	ENSCGRG00000018699	Pabpc5	100	93.717	Cricetulus_griseus_crigri
ENSMOCG00000001554	Pabpc5	100	77.285	ENSETEG00000011832	PABPC5	100	77.285	Echinops_telfairi
ENSMOCG00000001554	Pabpc5	100	95.288	ENSEASG00005014396	PABPC5	100	95.288	Equus_asinus_asinus
ENSMOCG00000001554	Pabpc5	100	95.288	ENSECAG00000003452	PABPC5	100	95.288	Equus_caballus
ENSMOCG00000001554	Pabpc5	100	95.288	ENSFCAG00000004998	PABPC5	100	95.288	Felis_catus
ENSMOCG00000001554	Pabpc5	100	94.241	ENSFDAG00000000126	PABPC5	100	94.241	Fukomys_damarensis
ENSMOCG00000001554	Pabpc5	99	95.538	ENSGGOG00000007622	PABPC5	99	95.538	Gorilla_gorilla
ENSMOCG00000001554	Pabpc5	95	95.413	ENSJJAG00000011960	Pabpc5	100	95.413	Jaculus_jaculus
ENSMOCG00000001554	Pabpc5	99	95.801	ENSMFAG00000024561	PABPC5	99	95.801	Macaca_fascicularis
ENSMOCG00000001554	Pabpc5	99	95.801	ENSMMUG00000011562	PABPC5	99	95.801	Macaca_mulatta
ENSMOCG00000001554	Pabpc5	99	95.801	ENSMNEG00000037604	PABPC5	99	95.801	Macaca_nemestrina
ENSMOCG00000001554	Pabpc5	99	95.801	ENSMLEG00000028318	PABPC5	99	95.801	Mandrillus_leucophaeus
ENSMOCG00000001554	Pabpc5	100	94.241	ENSMICG00000041706	PABPC5	100	94.241	Microcebus_murinus
ENSMOCG00000001554	Pabpc5	99	93.158	MGP_CAROLIEiJ_G0033367	Pabpc5	99	93.158	Mus_caroli
ENSMOCG00000001554	Pabpc5	99	93.684	ENSMUSG00000034732	Pabpc5	99	93.684	Mus_musculus
ENSMOCG00000001554	Pabpc5	100	93.979	MGP_PahariEiJ_G0031908	Pabpc5	100	93.979	Mus_pahari
ENSMOCG00000001554	Pabpc5	99	93.684	MGP_SPRETEiJ_G0034533	Pabpc5	99	93.684	Mus_spretus
ENSMOCG00000001554	Pabpc5	100	94.764	ENSMPUG00000018465	PABPC5	100	94.764	Mustela_putorius_furo
ENSMOCG00000001554	Pabpc5	100	94.241	ENSMLUG00000008244	PABPC5	100	94.241	Myotis_lucifugus
ENSMOCG00000001554	Pabpc5	95	94.037	ENSNGAG00000004371	Pabpc5	100	94.037	Nannospalax_galili
ENSMOCG00000001554	Pabpc5	99	95.538	ENSNLEG00000035086	PABPC5	99	95.538	Nomascus_leucogenys
ENSMOCG00000001554	Pabpc5	95	96.833	ENSOPRG00000000856	PABPC5	100	96.833	Ochotona_princeps
ENSMOCG00000001554	Pabpc5	100	95.288	ENSOCUG00000010919	PABPC5	100	95.288	Oryctolagus_cuniculus
ENSMOCG00000001554	Pabpc5	100	94.503	ENSOGAG00000006882	PABPC5	100	94.503	Otolemur_garnettii
ENSMOCG00000001554	Pabpc5	100	95.550	ENSOARG00000010260	PABPC5	100	95.550	Ovis_aries
ENSMOCG00000001554	Pabpc5	99	95.276	ENSPPAG00000007378	PABPC5	99	95.276	Pan_paniscus
ENSMOCG00000001554	Pabpc5	100	95.288	ENSPPRG00000010742	PABPC5	100	95.288	Panthera_pardus
ENSMOCG00000001554	Pabpc5	100	95.288	ENSPTIG00000001480	PABPC5	100	95.288	Panthera_tigris_altaica
ENSMOCG00000001554	Pabpc5	99	95.538	ENSPTRG00000022078	PABPC5	99	95.538	Pan_troglodytes
ENSMOCG00000001554	Pabpc5	99	95.801	ENSPANG00000018282	PABPC5	99	95.801	Papio_anubis
ENSMOCG00000001554	Pabpc5	100	95.026	ENSPEMG00000000171	Pabpc5	100	95.026	Peromyscus_maniculatus_bairdii
ENSMOCG00000001554	Pabpc5	99	95.538	ENSPPYG00000020526	PABPC5	99	95.538	Pongo_abelii
ENSMOCG00000001554	Pabpc5	99	95.636	ENSPCAG00000015577	PABPC5	100	95.636	Procavia_capensis
ENSMOCG00000001554	Pabpc5	100	95.026	ENSPCOG00000000676	PABPC5	100	95.026	Propithecus_coquereli
ENSMOCG00000001554	Pabpc5	100	95.026	ENSPVAG00000006465	PABPC5	100	95.026	Pteropus_vampyrus
ENSMOCG00000001554	Pabpc5	100	94.241	ENSRNOG00000003354	Pabpc5	100	94.241	Rattus_norvegicus
ENSMOCG00000001554	Pabpc5	99	95.801	ENSRBIG00000011760	PABPC5	99	95.801	Rhinopithecus_bieti
ENSMOCG00000001554	Pabpc5	99	95.801	ENSRROG00000036708	PABPC5	99	95.801	Rhinopithecus_roxellana
ENSMOCG00000001554	Pabpc5	99	95.276	ENSSBOG00000008658	PABPC5	99	95.276	Saimiri_boliviensis_boliviensis
ENSMOCG00000001554	Pabpc5	100	92.932	ENSSARG00000014012	PABPC5	100	92.932	Sorex_araneus
ENSMOCG00000001554	Pabpc5	100	95.550	ENSSSCG00000040194	PABPC5	100	95.550	Sus_scrofa
ENSMOCG00000001554	Pabpc5	100	96.597	ENSTBEG00000016482	PABPC5	100	96.597	Tupaia_belangeri
ENSMOCG00000001554	Pabpc5	100	95.026	ENSUAMG00000013627	PABPC5	100	95.026	Ursus_americanus
ENSMOCG00000001554	Pabpc5	100	94.764	ENSUMAG00000023934	PABPC5	100	94.764	Ursus_maritimus
ENSMOCG00000001554	Pabpc5	100	94.764	ENSVPAG00000001063	PABPC5	100	94.764	Vicugna_pacos
ENSMOCG00000001554	Pabpc5	100	95.550	ENSVVUG00000013172	PABPC5	100	95.550	Vulpes_vulpes