EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000001611 (Gene tree)
Gene ID: 101988055
Gene Symbol: Smarca2
Alias: 2610209L14Rik|Snf2l2|brm
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 2
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 170185 bases
Position: chr8:55877599-56047783
Accession: 101988055
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000002092	ResIII	PF04851.15	2e-08	1	1
ENSMOCP00000002106	ResIII	PF04851.15	2.1e-08	1	1
ENSMOCP00000002100	ResIII	PF04851.15	2.1e-08	1	1
ENSMOCP00000002106	BRK	PF07533.16	2.4e-17	1	1
ENSMOCP00000002092	BRK	PF07533.16	2.4e-17	1	1
ENSMOCP00000002100	BRK	PF07533.16	2.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000002226	-	1870	XM_013348061	ENSMOCP00000002107	276 (aa)	XP_013203515	UPI00067BBEDD
ENSMOCT00000002225	-	4734	-	ENSMOCP00000002106	1577 (aa)	-	-
ENSMOCT00000002234	-	204	-	ENSMOCP00000002114	68 (aa)	-	-
ENSMOCT00000002237	-	1984	XM_005352097	ENSMOCP00000002117	260 (aa)	XP_005352154	UPI00067B2398
ENSMOCT00000002228	-	837	-	ENSMOCP00000002108	278 (aa)	-	-
ENSMOCT00000002219	-	4773	XM_005352094	ENSMOCP00000002100	1590 (aa)	XP_005352151	UPI00038BB65A
ENSMOCT00000002211	-	5769	XM_013348060	ENSMOCP00000002092	1572 (aa)	XP_013203514	UPI00067E5626

Gene Model

Click here to download ENSMOCG00000001611's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000001611's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000001611	Smarca2	93	79.895	ENSMOCG00000022209	Smarca4	98	73.572

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000001611	Smarca2	100	97.206	ENSG00000080503	SMARCA2	100	98.658	Homo_sapiens
ENSMOCG00000001611	Smarca2	100	80.113	ENSAPOG00000002641	SMARCA2	97	80.180	Acanthochromis_polyacanthus
ENSMOCG00000001611	Smarca2	80	98.905	ENSAMEG00000012325	SMARCA2	100	98.905	Ailuropoda_melanoleuca
ENSMOCG00000001611	Smarca2	100	79.674	ENSACIG00000015607	SMARCA2	97	80.051	Amphilophus_citrinellus
ENSMOCG00000001611	Smarca2	100	80.138	ENSAOCG00000009647	-	97	80.352	Amphiprion_ocellaris
ENSMOCG00000001611	Smarca2	100	80.113	ENSAPEG00000007646	SMARCA2	97	80.309	Amphiprion_percula
ENSMOCG00000001611	Smarca2	99	81.119	ENSATEG00000006916	SMARCA2	96	81.141	Anabas_testudineus
ENSMOCG00000001611	Smarca2	89	89.958	ENSAPLG00000013873	SMARCA2	94	88.657	Anas_platyrhynchos
ENSMOCG00000001611	Smarca2	100	89.962	ENSACAG00000002423	SMARCA2	100	89.510	Anolis_carolinensis
ENSMOCG00000001611	Smarca2	100	97.010	ENSANAG00000026498	SMARCA2	100	97.010	Aotus_nancymaae
ENSMOCG00000001611	Smarca2	100	80.910	ENSACLG00000004248	SMARCA2	97	81.453	Astatotilapia_calliptera
ENSMOCG00000001611	Smarca2	100	81.841	ENSAMXG00000012404	smarca2	97	82.628	Astyanax_mexicanus
ENSMOCG00000001611	Smarca2	100	96.249	ENSBTAG00000007494	SMARCA2	100	96.249	Bos_taurus
ENSMOCG00000001611	Smarca2	99	97.185	ENSCJAG00000010710	SMARCA2	99	97.080	Callithrix_jacchus
ENSMOCG00000001611	Smarca2	100	96.438	ENSCAFG00000002013	SMARCA2	100	96.438	Canis_familiaris
ENSMOCG00000001611	Smarca2	77	94.495	ENSCAFG00020026802	SMARCA2	98	94.495	Canis_lupus_dingo
ENSMOCG00000001611	Smarca2	100	96.249	ENSCHIG00000025863	SMARCA2	100	96.249	Capra_hircus
ENSMOCG00000001611	Smarca2	100	96.366	ENSTSYG00000003858	SMARCA2	100	96.366	Carlito_syrichta
ENSMOCG00000001611	Smarca2	99	92.400	ENSCAPG00000002890	SMARCA2	100	93.097	Cavia_aperea
ENSMOCG00000001611	Smarca2	100	96.565	ENSCPOG00000005475	SMARCA2	100	96.565	Cavia_porcellus
ENSMOCG00000001611	Smarca2	100	97.139	ENSCCAG00000030636	SMARCA2	100	97.139	Cebus_capucinus
ENSMOCG00000001611	Smarca2	100	96.379	ENSCATG00000031470	SMARCA2	100	96.354	Cercocebus_atys
ENSMOCG00000001611	Smarca2	100	96.576	ENSCLAG00000014484	SMARCA2	100	96.576	Chinchilla_lanigera
ENSMOCG00000001611	Smarca2	94	97.009	ENSCSAG00000008650	SMARCA2	99	97.009	Chlorocebus_sabaeus
ENSMOCG00000001611	Smarca2	86	90.128	ENSCHOG00000004316	SMARCA2	86	90.769	Choloepus_hoffmanni
ENSMOCG00000001611	Smarca2	100	91.100	ENSCPBG00000025463	SMARCA2	100	94.970	Chrysemys_picta_bellii
ENSMOCG00000001611	Smarca2	100	97.203	ENSCANG00000039597	SMARCA2	100	97.203	Colobus_angolensis_palliatus
ENSMOCG00000001611	Smarca2	100	90.772	ENSCGRG00001002323	Smarca2	100	90.852	Cricetulus_griseus_chok1gshd
ENSMOCG00000001611	Smarca2	99	77.351	ENSCSEG00000019311	SMARCA2	97	77.785	Cynoglossus_semilaevis
ENSMOCG00000001611	Smarca2	84	80.015	ENSCVAG00000016571	SMARCA2	95	79.084	Cyprinodon_variegatus
ENSMOCG00000001611	Smarca2	100	82.116	ENSDARG00000008904	smarca2	97	82.189	Danio_rerio
ENSMOCG00000001611	Smarca2	100	94.591	ENSDNOG00000006402	SMARCA2	100	94.843	Dasypus_novemcinctus
ENSMOCG00000001611	Smarca2	100	96.949	ENSDORG00000014832	Smarca2	100	96.949	Dipodomys_ordii
ENSMOCG00000001611	Smarca2	81	60.186	FBgn0000212	brm	71	62.932	Drosophila_melanogaster
ENSMOCG00000001611	Smarca2	96	69.526	ENSEBUG00000011442	-	98	69.522	Eptatretus_burgeri
ENSMOCG00000001611	Smarca2	86	62.222	ENSEBUG00000002449	-	91	65.152	Eptatretus_burgeri
ENSMOCG00000001611	Smarca2	100	96.628	ENSEASG00005010312	SMARCA2	100	96.628	Equus_asinus_asinus
ENSMOCG00000001611	Smarca2	67	95.833	ENSEEUG00000015540	-	69	95.833	Erinaceus_europaeus
ENSMOCG00000001611	Smarca2	92	80.801	ENSELUG00000010318	smarca2	96	78.973	Esox_lucius
ENSMOCG00000001611	Smarca2	100	95.611	ENSFCAG00000001568	SMARCA2	100	95.802	Felis_catus
ENSMOCG00000001611	Smarca2	100	91.429	ENSFALG00000010416	SMARCA2	100	92.266	Ficedula_albicollis
ENSMOCG00000001611	Smarca2	99	95.397	ENSFDAG00000010502	SMARCA2	99	95.630	Fukomys_damarensis
ENSMOCG00000001611	Smarca2	100	80.512	ENSFHEG00000021250	SMARCA2	97	80.651	Fundulus_heteroclitus
ENSMOCG00000001611	Smarca2	98	77.899	ENSGMOG00000014229	SMARCA2	97	78.030	Gadus_morhua
ENSMOCG00000001611	Smarca2	100	91.990	ENSGALG00000010164	SMARCA2	100	91.481	Gallus_gallus
ENSMOCG00000001611	Smarca2	95	76.795	ENSGAFG00000001164	SMARCA2	93	76.981	Gambusia_affinis
ENSMOCG00000001611	Smarca2	99	79.644	ENSGACG00000014488	SMARCA2	97	78.876	Gasterosteus_aculeatus
ENSMOCG00000001611	Smarca2	100	91.122	ENSGAGG00000024412	SMARCA2	100	91.608	Gopherus_agassizii
ENSMOCG00000001611	Smarca2	78	99.183	ENSGGOG00000000513	SMARCA2	85	96.996	Gorilla_gorilla
ENSMOCG00000001611	Smarca2	100	80.025	ENSHBUG00000006691	SMARCA2	96	81.421	Haplochromis_burtoni
ENSMOCG00000001611	Smarca2	100	95.343	ENSHGLG00000005215	SMARCA2	99	96.200	Heterocephalus_glaber_female
ENSMOCG00000001611	Smarca2	100	95.865	ENSHGLG00100010496	SMARCA2	100	95.802	Heterocephalus_glaber_male
ENSMOCG00000001611	Smarca2	89	74.574	ENSHCOG00000015348	-	74	86.733	Hippocampus_comes
ENSMOCG00000001611	Smarca2	100	80.585	ENSIPUG00000011060	smarca2	97	80.153	Ictalurus_punctatus
ENSMOCG00000001611	Smarca2	100	97.081	ENSSTOG00000006812	SMARCA2	100	97.081	Ictidomys_tridecemlineatus
ENSMOCG00000001611	Smarca2	100	97.455	ENSJJAG00000010867	Smarca2	100	97.455	Jaculus_jaculus
ENSMOCG00000001611	Smarca2	100	79.789	ENSKMAG00000015844	-	98	80.140	Kryptolebias_marmoratus
ENSMOCG00000001611	Smarca2	98	83.632	ENSLOCG00000011499	smarca2	83	88.000	Lepisosteus_oculatus
ENSMOCG00000001611	Smarca2	100	94.081	ENSLAFG00000014061	SMARCA2	83	97.336	Loxodonta_africana
ENSMOCG00000001611	Smarca2	100	95.852	ENSMFAG00000003814	SMARCA2	100	95.852	Macaca_fascicularis
ENSMOCG00000001611	Smarca2	100	97.139	ENSMMUG00000015279	SMARCA2	100	97.139	Macaca_mulatta
ENSMOCG00000001611	Smarca2	100	96.635	ENSMNEG00000041069	SMARCA2	100	96.635	Macaca_nemestrina
ENSMOCG00000001611	Smarca2	100	94.783	ENSMLEG00000027418	SMARCA2	100	94.783	Mandrillus_leucophaeus
ENSMOCG00000001611	Smarca2	100	80.917	ENSMAMG00000003056	SMARCA2	98	81.067	Mastacembelus_armatus
ENSMOCG00000001611	Smarca2	100	80.489	ENSMZEG00005020709	SMARCA2	97	80.759	Maylandia_zebra
ENSMOCG00000001611	Smarca2	77	77.955	ENSMGAG00000005160	-	100	76.760	Meleagris_gallopavo
ENSMOCG00000001611	Smarca2	100	96.692	ENSMICG00000005162	SMARCA2	100	96.692	Microcebus_murinus
ENSMOCG00000001611	Smarca2	99	79.140	ENSMMOG00000014196	SMARCA2	97	79.542	Mola_mola
ENSMOCG00000001611	Smarca2	100	91.708	ENSMODG00000003578	SMARCA2	100	91.771	Monodelphis_domestica
ENSMOCG00000001611	Smarca2	99	81.053	ENSMALG00000009611	SMARCA2	97	81.164	Monopterus_albus
ENSMOCG00000001611	Smarca2	100	98.044	MGP_CAROLIEiJ_G0022841	Smarca2	100	98.044	Mus_caroli
ENSMOCG00000001611	Smarca2	100	97.940	ENSMUSG00000024921	Smarca2	99	99.441	Mus_musculus
ENSMOCG00000001611	Smarca2	100	98.292	MGP_PahariEiJ_G0014334	Smarca2	100	98.292	Mus_pahari
ENSMOCG00000001611	Smarca2	100	97.941	MGP_SPRETEiJ_G0023759	Smarca2	99	99.180	Mus_spretus
ENSMOCG00000001611	Smarca2	81	98.907	ENSMPUG00000005171	SMARCA2	94	98.907	Mustela_putorius_furo
ENSMOCG00000001611	Smarca2	99	90.207	ENSMLUG00000002342	SMARCA2	83	93.041	Myotis_lucifugus
ENSMOCG00000001611	Smarca2	99	96.098	ENSNGAG00000000108	Smarca2	99	96.098	Nannospalax_galili
ENSMOCG00000001611	Smarca2	95	68.074	ENSNBRG00000017998	SMARCA2	94	83.085	Neolamprologus_brichardi
ENSMOCG00000001611	Smarca2	100	94.466	ENSNLEG00000008575	SMARCA2	100	94.466	Nomascus_leucogenys
ENSMOCG00000001611	Smarca2	100	84.969	ENSMEUG00000009812	SMARCA2	100	85.031	Notamacropus_eugenii
ENSMOCG00000001611	Smarca2	100	91.208	ENSOPRG00000013474	SMARCA2	100	91.208	Ochotona_princeps
ENSMOCG00000001611	Smarca2	99	95.990	ENSODEG00000005452	SMARCA2	99	95.990	Octodon_degus
ENSMOCG00000001611	Smarca2	99	80.643	ENSONIG00000014163	SMARCA2	81	86.451	Oreochromis_niloticus
ENSMOCG00000001611	Smarca2	100	96.018	ENSOCUG00000006320	SMARCA2	100	96.018	Oryctolagus_cuniculus
ENSMOCG00000001611	Smarca2	100	79.811	ENSORLG00000020820	SMARCA2	97	78.457	Oryzias_latipes
ENSMOCG00000001611	Smarca2	100	79.862	ENSORLG00015006289	SMARCA2	97	79.217	Oryzias_latipes_hsok
ENSMOCG00000001611	Smarca2	99	80.575	ENSOMEG00000009736	-	97	80.196	Oryzias_melastigma
ENSMOCG00000001611	Smarca2	99	92.567	ENSOGAG00000017053	SMARCA2	99	92.942	Otolemur_garnettii
ENSMOCG00000001611	Smarca2	100	94.660	ENSOARG00000013265	SMARCA2	100	94.660	Ovis_aries
ENSMOCG00000001611	Smarca2	100	92.621	ENSPPAG00000038717	SMARCA2	100	93.985	Pan_paniscus
ENSMOCG00000001611	Smarca2	100	95.674	ENSPPRG00000001879	SMARCA2	100	95.865	Panthera_pardus
ENSMOCG00000001611	Smarca2	100	95.371	ENSPTRG00000051168	SMARCA2	100	95.117	Pan_troglodytes
ENSMOCG00000001611	Smarca2	100	89.843	ENSPANG00000025121	SMARCA2	100	90.019	Papio_anubis
ENSMOCG00000001611	Smarca2	100	82.517	ENSPKIG00000018469	-	97	82.192	Paramormyrops_kingsleyae
ENSMOCG00000001611	Smarca2	100	90.875	ENSPSIG00000006284	SMARCA2	100	91.001	Pelodiscus_sinensis
ENSMOCG00000001611	Smarca2	99	73.899	ENSPMGG00000013696	-	98	74.392	Periophthalmus_magnuspinnatus
ENSMOCG00000001611	Smarca2	100	98.556	ENSPEMG00000019821	Smarca2	100	98.556	Peromyscus_maniculatus_bairdii
ENSMOCG00000001611	Smarca2	94	72.108	ENSPMAG00000005337	-	78	78.010	Petromyzon_marinus
ENSMOCG00000001611	Smarca2	100	93.193	ENSPCIG00000015658	SMARCA2	100	93.257	Phascolarctos_cinereus
ENSMOCG00000001611	Smarca2	100	79.812	ENSPFOG00000001856	SMARCA2	97	79.872	Poecilia_formosa
ENSMOCG00000001611	Smarca2	99	79.610	ENSPLAG00000017829	SMARCA2	96	77.527	Poecilia_latipinna
ENSMOCG00000001611	Smarca2	99	79.660	ENSPMEG00000001815	-	97	77.440	Poecilia_mexicana
ENSMOCG00000001611	Smarca2	100	79.342	ENSPREG00000013800	SMARCA2	97	77.778	Poecilia_reticulata
ENSMOCG00000001611	Smarca2	100	96.631	ENSPPYG00000019258	SMARCA2	100	96.631	Pongo_abelii
ENSMOCG00000001611	Smarca2	76	84.409	ENSPCAG00000016969	SMARCA2	78	84.802	Procavia_capensis
ENSMOCG00000001611	Smarca2	100	94.787	ENSPCOG00000025709	SMARCA2	100	94.787	Propithecus_coquereli
ENSMOCG00000001611	Smarca2	91	97.368	ENSPVAG00000000901	SMARCA2	95	97.368	Pteropus_vampyrus
ENSMOCG00000001611	Smarca2	100	77.247	ENSPNYG00000004533	SMARCA2	97	76.968	Pundamilia_nyererei
ENSMOCG00000001611	Smarca2	99	82.952	ENSPNAG00000014635	smarca2	97	82.452	Pygocentrus_nattereri
ENSMOCG00000001611	Smarca2	100	97.999	ENSRNOG00000011931	Smarca2	100	97.999	Rattus_norvegicus
ENSMOCG00000001611	Smarca2	100	95.359	ENSRBIG00000038618	SMARCA2	100	95.359	Rhinopithecus_bieti
ENSMOCG00000001611	Smarca2	100	96.103	ENSRROG00000019271	SMARCA2	100	96.103	Rhinopithecus_roxellana
ENSMOCG00000001611	Smarca2	100	92.672	ENSSBOG00000034827	SMARCA2	100	92.893	Saimiri_boliviensis_boliviensis
ENSMOCG00000001611	Smarca2	100	91.334	ENSSHAG00000007884	SMARCA2	100	91.250	Sarcophilus_harrisii
ENSMOCG00000001611	Smarca2	91	83.322	ENSSFOG00015014870	SMARCA2	94	84.886	Scleropages_formosus
ENSMOCG00000001611	Smarca2	100	80.477	ENSSMAG00000013707	SMARCA2	97	80.747	Scophthalmus_maximus
ENSMOCG00000001611	Smarca2	99	80.740	ENSSDUG00000008852	-	98	80.263	Seriola_dumerili
ENSMOCG00000001611	Smarca2	99	80.867	ENSSLDG00000025449	SMARCA2	97	80.739	Seriola_lalandi_dorsalis
ENSMOCG00000001611	Smarca2	95	97.126	ENSSARG00000007888	SMARCA2	95	96.842	Sorex_araneus
ENSMOCG00000001611	Smarca2	95	87.116	ENSSPUG00000001629	SMARCA2	98	87.250	Sphenodon_punctatus
ENSMOCG00000001611	Smarca2	100	80.163	ENSSPAG00000020091	-	97	80.039	Stegastes_partitus
ENSMOCG00000001611	Smarca2	100	96.120	ENSSSCG00000005232	SMARCA2	100	96.120	Sus_scrofa
ENSMOCG00000001611	Smarca2	98	91.211	ENSTGUG00000005460	SMARCA2	98	91.004	Taeniopygia_guttata
ENSMOCG00000001611	Smarca2	99	79.659	ENSTRUG00000015619	SMARCA2	97	79.339	Takifugu_rubripes
ENSMOCG00000001611	Smarca2	67	99.578	ENSTBEG00000008767	SMARCA2	74	99.578	Tupaia_belangeri
ENSMOCG00000001611	Smarca2	95	94.894	ENSTTRG00000002033	SMARCA2	95	94.894	Tursiops_truncatus
ENSMOCG00000001611	Smarca2	89	93.710	ENSUAMG00000024701	SMARCA2	99	93.714	Ursus_americanus
ENSMOCG00000001611	Smarca2	92	86.721	ENSVPAG00000001204	SMARCA2	100	86.721	Vicugna_pacos
ENSMOCG00000001611	Smarca2	76	95.496	ENSVVUG00000004598	SMARCA2	99	95.496	Vulpes_vulpes
ENSMOCG00000001611	Smarca2	100	82.930	ENSXETG00000015299	smarca2	82	87.302	Xenopus_tropicalis
ENSMOCG00000001611	Smarca2	89	79.605	ENSXCOG00000011073	SMARCA2	97	80.058	Xiphophorus_couchianus
ENSMOCG00000001611	Smarca2	100	79.009	ENSXMAG00000015611	SMARCA2	99	80.561	Xiphophorus_maculatus