EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000001701 (Gene tree)
Gene ID: 101992791
Gene Symbol: Prpf6
Alias: 1190003A07Rik|2610031L17Rik|ANT-1|U5-102K
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 57001 bases
Position: chrLG8:233311-290311
Accession: 101992791
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000002175	PRP1_N	PF06424.12	1.6e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000002300	-	3047	XM_005362670	ENSMOCP00000002175	941 (aa)	XP_005362727	UPI00038BC5B8

Gene Model

Click here to download ENSMOCG00000001701's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000001701's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000001701	Prpf6	100	98.193	ENSG00000101161	PRPF6	100	98.193	Homo_sapiens
ENSMOCG00000001701	Prpf6	100	93.092	ENSAPOG00000010395	prpf6	96	93.518	Acanthochromis_polyacanthus
ENSMOCG00000001701	Prpf6	100	97.346	ENSAMEG00000001916	PRPF6	99	97.346	Ailuropoda_melanoleuca
ENSMOCG00000001701	Prpf6	100	92.774	ENSACIG00000019862	prpf6	96	93.199	Amphilophus_citrinellus
ENSMOCG00000001701	Prpf6	100	92.986	ENSAOCG00000012988	prpf6	96	93.411	Amphiprion_ocellaris
ENSMOCG00000001701	Prpf6	100	86.291	ENSAPEG00000008301	prpf6	100	86.823	Amphiprion_percula
ENSMOCG00000001701	Prpf6	100	92.455	ENSATEG00000005581	prpf6	96	92.880	Anabas_testudineus
ENSMOCG00000001701	Prpf6	100	98.087	ENSACAG00000006464	PRPF6	95	98.087	Anolis_carolinensis
ENSMOCG00000001701	Prpf6	100	98.300	ENSANAG00000012661	PRPF6	100	98.822	Aotus_nancymaae
ENSMOCG00000001701	Prpf6	100	92.667	ENSACLG00000025875	prpf6	96	93.092	Astatotilapia_calliptera
ENSMOCG00000001701	Prpf6	99	93.191	ENSAMXG00000001929	prpf6	96	93.617	Astyanax_mexicanus
ENSMOCG00000001701	Prpf6	100	98.406	ENSBTAG00000011656	PRPF6	100	98.406	Bos_taurus
ENSMOCG00000001701	Prpf6	100	98.300	ENSCJAG00000010616	PRPF6	100	98.300	Callithrix_jacchus
ENSMOCG00000001701	Prpf6	100	98.618	ENSCAFG00000013165	PRPF6	100	98.618	Canis_familiaris
ENSMOCG00000001701	Prpf6	100	98.618	ENSCAFG00020002050	PRPF6	100	98.618	Canis_lupus_dingo
ENSMOCG00000001701	Prpf6	100	98.406	ENSCHIG00000018187	PRPF6	100	98.406	Capra_hircus
ENSMOCG00000001701	Prpf6	100	99.044	ENSTSYG00000007814	PRPF6	100	99.044	Carlito_syrichta
ENSMOCG00000001701	Prpf6	97	98.255	ENSCAPG00000015077	PRPF6	100	98.255	Cavia_aperea
ENSMOCG00000001701	Prpf6	100	99.575	ENSCPOG00000007518	PRPF6	100	99.575	Cavia_porcellus
ENSMOCG00000001701	Prpf6	100	95.112	ENSCCAG00000024564	PRPF6	100	95.112	Cebus_capucinus
ENSMOCG00000001701	Prpf6	100	98.087	ENSCATG00000037473	PRPF6	100	98.087	Cercocebus_atys
ENSMOCG00000001701	Prpf6	100	95.537	ENSCLAG00000003854	PRPF6	100	95.537	Chinchilla_lanigera
ENSMOCG00000001701	Prpf6	100	93.031	ENSCSAG00000016742	PRPF6	100	93.031	Chlorocebus_sabaeus
ENSMOCG00000001701	Prpf6	85	81.138	ENSCHOG00000003315	-	100	81.138	Choloepus_hoffmanni
ENSMOCG00000001701	Prpf6	100	98.193	ENSCPBG00000013964	PRPF6	96	98.193	Chrysemys_picta_bellii
ENSMOCG00000001701	Prpf6	99	73.573	ENSCING00000008817	-	99	73.573	Ciona_intestinalis
ENSMOCG00000001701	Prpf6	100	98.087	ENSCANG00000038230	PRPF6	100	98.087	Colobus_angolensis_palliatus
ENSMOCG00000001701	Prpf6	100	99.787	ENSCGRG00001022666	Prpf6	100	99.787	Cricetulus_griseus_chok1gshd
ENSMOCG00000001701	Prpf6	100	87.248	ENSCSEG00000018561	prpf6	100	87.673	Cynoglossus_semilaevis
ENSMOCG00000001701	Prpf6	100	92.986	ENSCVAG00000010550	prpf6	96	93.411	Cyprinodon_variegatus
ENSMOCG00000001701	Prpf6	100	92.667	ENSDARG00000091367	prpf6	99	93.092	Danio_rerio
ENSMOCG00000001701	Prpf6	100	97.662	ENSDNOG00000040544	PRPF6	100	97.662	Dasypus_novemcinctus
ENSMOCG00000001701	Prpf6	91	98.248	ENSDORG00000005406	Prpf6	100	98.248	Dipodomys_ordii
ENSMOCG00000001701	Prpf6	99	72.121	FBgn0036828	CG6841	98	72.425	Drosophila_melanogaster
ENSMOCG00000001701	Prpf6	85	95.760	ENSETEG00000004447	PRPF6	85	95.760	Echinops_telfairi
ENSMOCG00000001701	Prpf6	99	87.169	ENSEBUG00000008835	prpf6	99	87.169	Eptatretus_burgeri
ENSMOCG00000001701	Prpf6	100	98.618	ENSEASG00005023115	PRPF6	100	98.618	Equus_asinus_asinus
ENSMOCG00000001701	Prpf6	100	94.368	ENSECAG00000013983	PRPF6	100	94.368	Equus_caballus
ENSMOCG00000001701	Prpf6	90	100.000	ENSEEUG00000000180	PRPF6	82	100.000	Erinaceus_europaeus
ENSMOCG00000001701	Prpf6	100	91.605	ENSELUG00000001945	prpf6	93	91.605	Esox_lucius
ENSMOCG00000001701	Prpf6	100	98.512	ENSFCAG00000001183	PRPF6	100	98.512	Felis_catus
ENSMOCG00000001701	Prpf6	100	98.087	ENSFALG00000010326	-	97	98.087	Ficedula_albicollis
ENSMOCG00000001701	Prpf6	100	90.436	ENSFALG00000006046	-	97	90.436	Ficedula_albicollis
ENSMOCG00000001701	Prpf6	100	98.087	ENSFDAG00000006451	PRPF6	100	99.546	Fukomys_damarensis
ENSMOCG00000001701	Prpf6	100	93.624	ENSFHEG00000000560	prpf6	96	93.624	Fundulus_heteroclitus
ENSMOCG00000001701	Prpf6	100	89.535	ENSGMOG00000015622	prpf6	99	89.535	Gadus_morhua
ENSMOCG00000001701	Prpf6	100	98.087	ENSGALG00000006001	PRPF6	100	98.087	Gallus_gallus
ENSMOCG00000001701	Prpf6	100	88.310	ENSGAFG00000021109	prpf6	96	88.735	Gambusia_affinis
ENSMOCG00000001701	Prpf6	100	91.498	ENSGACG00000002576	prpf6	99	91.498	Gasterosteus_aculeatus
ENSMOCG00000001701	Prpf6	100	98.087	ENSGAGG00000008653	PRPF6	96	98.087	Gopherus_agassizii
ENSMOCG00000001701	Prpf6	100	98.193	ENSGGOG00000016876	PRPF6	100	98.193	Gorilla_gorilla
ENSMOCG00000001701	Prpf6	100	92.667	ENSHBUG00000004496	prpf6	96	93.092	Haplochromis_burtoni
ENSMOCG00000001701	Prpf6	100	99.362	ENSHGLG00000009222	PRPF6	100	99.362	Heterocephalus_glaber_female
ENSMOCG00000001701	Prpf6	97	99.346	ENSHGLG00100016600	PRPF6	100	99.346	Heterocephalus_glaber_male
ENSMOCG00000001701	Prpf6	100	91.498	ENSHCOG00000011513	prpf6	96	91.923	Hippocampus_comes
ENSMOCG00000001701	Prpf6	100	93.730	ENSIPUG00000004912	prpf6	96	93.730	Ictalurus_punctatus
ENSMOCG00000001701	Prpf6	100	96.603	ENSSTOG00000002922	PRPF6	100	96.603	Ictidomys_tridecemlineatus
ENSMOCG00000001701	Prpf6	100	99.362	ENSJJAG00000000836	Prpf6	100	99.362	Jaculus_jaculus
ENSMOCG00000001701	Prpf6	100	92.455	ENSKMAG00000017800	prpf6	96	92.880	Kryptolebias_marmoratus
ENSMOCG00000001701	Prpf6	100	92.136	ENSLBEG00000012582	prpf6	96	92.136	Labrus_bergylta
ENSMOCG00000001701	Prpf6	100	94.687	ENSLOCG00000004827	prpf6	96	93.730	Lepisosteus_oculatus
ENSMOCG00000001701	Prpf6	100	98.087	ENSLAFG00000005272	PRPF6	100	98.087	Loxodonta_africana
ENSMOCG00000001701	Prpf6	100	98.087	ENSMFAG00000037542	PRPF6	100	98.087	Macaca_fascicularis
ENSMOCG00000001701	Prpf6	100	91.507	ENSMMUG00000015558	PRPF6	98	99.653	Macaca_mulatta
ENSMOCG00000001701	Prpf6	100	83.792	ENSMNEG00000045555	PRPF6	100	83.792	Macaca_nemestrina
ENSMOCG00000001701	Prpf6	100	92.774	ENSMAMG00000010718	prpf6	96	93.199	Mastacembelus_armatus
ENSMOCG00000001701	Prpf6	100	92.144	ENSMZEG00005015261	-	99	92.569	Maylandia_zebra
ENSMOCG00000001701	Prpf6	94	92.177	ENSMZEG00005026539	prpf6	100	92.630	Maylandia_zebra
ENSMOCG00000001701	Prpf6	97	98.037	ENSMGAG00000006634	PRPF6	100	98.037	Meleagris_gallopavo
ENSMOCG00000001701	Prpf6	100	99.894	ENSMAUG00000013969	Prpf6	100	99.894	Mesocricetus_auratus
ENSMOCG00000001701	Prpf6	87	98.418	ENSMICG00000017793	PRPF6	99	98.418	Microcebus_murinus
ENSMOCG00000001701	Prpf6	100	91.923	ENSMMOG00000020419	prpf6	100	92.349	Mola_mola
ENSMOCG00000001701	Prpf6	97	98.890	ENSMODG00000017051	PRPF6	99	98.890	Monodelphis_domestica
ENSMOCG00000001701	Prpf6	99	92.911	ENSMALG00000000089	prpf6	100	92.911	Monopterus_albus
ENSMOCG00000001701	Prpf6	100	93.092	MGP_CAROLIEiJ_G0024814	Prpf6	100	100.000	Mus_caroli
ENSMOCG00000001701	Prpf6	100	99.787	ENSMUSG00000002455	Prpf6	100	100.000	Mus_musculus
ENSMOCG00000001701	Prpf6	100	99.894	MGP_PahariEiJ_G0026262	Prpf6	100	100.000	Mus_pahari
ENSMOCG00000001701	Prpf6	100	99.787	MGP_SPRETEiJ_G0025741	Prpf6	100	100.000	Mus_spretus
ENSMOCG00000001701	Prpf6	91	98.093	ENSMPUG00000008673	PRPF6	99	98.093	Mustela_putorius_furo
ENSMOCG00000001701	Prpf6	100	99.681	ENSNGAG00000003365	Prpf6	100	99.681	Nannospalax_galili
ENSMOCG00000001701	Prpf6	100	92.774	ENSNBRG00000015025	prpf6	96	93.199	Neolamprologus_brichardi
ENSMOCG00000001701	Prpf6	100	98.087	ENSNLEG00000010208	PRPF6	100	98.087	Nomascus_leucogenys
ENSMOCG00000001701	Prpf6	100	88.933	ENSMEUG00000009824	-	90	88.933	Notamacropus_eugenii
ENSMOCG00000001701	Prpf6	100	93.518	ENSODEG00000004841	PRPF6	100	93.518	Octodon_degus
ENSMOCG00000001701	Prpf6	100	92.667	ENSONIG00000017406	prpf6	96	93.092	Oreochromis_niloticus
ENSMOCG00000001701	Prpf6	100	98.406	ENSOANG00000004920	PRPF6	100	98.406	Ornithorhynchus_anatinus
ENSMOCG00000001701	Prpf6	99	97.318	ENSOCUG00000014151	PRPF6	100	97.318	Oryctolagus_cuniculus
ENSMOCG00000001701	Prpf6	100	92.455	ENSORLG00000009592	prpf6	96	92.455	Oryzias_latipes
ENSMOCG00000001701	Prpf6	100	92.561	ENSORLG00020001458	prpf6	96	92.561	Oryzias_latipes_hni
ENSMOCG00000001701	Prpf6	100	92.561	ENSORLG00015018762	prpf6	96	92.561	Oryzias_latipes_hsok
ENSMOCG00000001701	Prpf6	100	92.455	ENSOMEG00000012174	prpf6	96	92.880	Oryzias_melastigma
ENSMOCG00000001701	Prpf6	100	91.295	ENSOGAG00000007573	PRPF6	100	91.295	Otolemur_garnettii
ENSMOCG00000001701	Prpf6	100	97.981	ENSOARG00000008776	PRPF6	99	97.981	Ovis_aries
ENSMOCG00000001701	Prpf6	100	98.193	ENSPPAG00000008686	PRPF6	100	98.193	Pan_paniscus
ENSMOCG00000001701	Prpf6	100	98.512	ENSPPRG00000008497	PRPF6	100	98.512	Panthera_pardus
ENSMOCG00000001701	Prpf6	97	98.473	ENSPTIG00000011184	PRPF6	97	98.473	Panthera_tigris_altaica
ENSMOCG00000001701	Prpf6	100	98.193	ENSPTRG00000013765	PRPF6	100	98.193	Pan_troglodytes
ENSMOCG00000001701	Prpf6	100	97.556	ENSPANG00000024135	PRPF6	100	97.556	Papio_anubis
ENSMOCG00000001701	Prpf6	100	94.261	ENSPKIG00000005627	prpf6	99	94.687	Paramormyrops_kingsleyae
ENSMOCG00000001701	Prpf6	94	98.299	ENSPSIG00000007717	PRPF6	100	98.299	Pelodiscus_sinensis
ENSMOCG00000001701	Prpf6	100	90.234	ENSPMGG00000008925	prpf6	96	90.446	Periophthalmus_magnuspinnatus
ENSMOCG00000001701	Prpf6	100	99.787	ENSPEMG00000016036	Prpf6	100	99.787	Peromyscus_maniculatus_bairdii
ENSMOCG00000001701	Prpf6	99	88.523	ENSPMAG00000006144	prpf6	99	88.523	Petromyzon_marinus
ENSMOCG00000001701	Prpf6	100	98.618	ENSPCIG00000017909	PRPF6	100	98.618	Phascolarctos_cinereus
ENSMOCG00000001701	Prpf6	100	93.199	ENSPFOG00000006431	prpf6	96	93.624	Poecilia_formosa
ENSMOCG00000001701	Prpf6	100	93.092	ENSPLAG00000005974	prpf6	96	93.518	Poecilia_latipinna
ENSMOCG00000001701	Prpf6	100	93.305	ENSPMEG00000009977	prpf6	96	93.730	Poecilia_mexicana
ENSMOCG00000001701	Prpf6	100	93.199	ENSPREG00000017993	prpf6	92	93.624	Poecilia_reticulata
ENSMOCG00000001701	Prpf6	100	97.662	ENSPPYG00000011256	PRPF6	100	97.662	Pongo_abelii
ENSMOCG00000001701	Prpf6	95	99.673	ENSPCAG00000006536	PRPF6	88	99.673	Procavia_capensis
ENSMOCG00000001701	Prpf6	100	98.406	ENSPCOG00000016881	PRPF6	100	98.406	Propithecus_coquereli
ENSMOCG00000001701	Prpf6	100	92.774	ENSPVAG00000014316	PRPF6	100	92.774	Pteropus_vampyrus
ENSMOCG00000001701	Prpf6	100	76.221	ENSPNYG00000001939	prpf6	96	81.509	Pundamilia_nyererei
ENSMOCG00000001701	Prpf6	100	93.411	ENSPNAG00000015606	prpf6	96	93.836	Pygocentrus_nattereri
ENSMOCG00000001701	Prpf6	100	99.787	ENSRNOG00000051498	Prpf6	100	99.787	Rattus_norvegicus
ENSMOCG00000001701	Prpf6	100	98.087	ENSRBIG00000043613	PRPF6	100	98.087	Rhinopithecus_bieti
ENSMOCG00000001701	Prpf6	100	94.921	ENSRROG00000040969	PRPF6	98	98.270	Rhinopithecus_roxellana
ENSMOCG00000001701	Prpf6	91	95.398	ENSSBOG00000020632	PRPF6	91	95.398	Saimiri_boliviensis_boliviensis
ENSMOCG00000001701	Prpf6	100	98.618	ENSSHAG00000016810	PRPF6	100	98.618	Sarcophilus_harrisii
ENSMOCG00000001701	Prpf6	99	94.737	ENSSFOG00015020859	prpf6	100	95.166	Scleropages_formosus
ENSMOCG00000001701	Prpf6	100	92.030	ENSSMAG00000008112	prpf6	96	92.030	Scophthalmus_maximus
ENSMOCG00000001701	Prpf6	100	92.667	ENSSDUG00000016142	prpf6	96	93.092	Seriola_dumerili
ENSMOCG00000001701	Prpf6	100	92.667	ENSSLDG00000025283	prpf6	100	89.586	Seriola_lalandi_dorsalis
ENSMOCG00000001701	Prpf6	94	96.825	ENSSPUG00000018260	PRPF6	100	96.825	Sphenodon_punctatus
ENSMOCG00000001701	Prpf6	100	92.667	ENSSPAG00000015850	prpf6	96	93.092	Stegastes_partitus
ENSMOCG00000001701	Prpf6	100	98.300	ENSSSCG00000029119	PRPF6	100	98.186	Sus_scrofa
ENSMOCG00000001701	Prpf6	100	98.193	ENSTGUG00000007221	PRPF6	99	98.193	Taeniopygia_guttata
ENSMOCG00000001701	Prpf6	100	91.817	ENSTRUG00000002920	prpf6	96	92.242	Takifugu_rubripes
ENSMOCG00000001701	Prpf6	100	85.518	ENSTNIG00000017873	prpf6	100	85.941	Tetraodon_nigroviridis
ENSMOCG00000001701	Prpf6	89	98.895	ENSTBEG00000005348	PRPF6	85	98.895	Tupaia_belangeri
ENSMOCG00000001701	Prpf6	100	97.875	ENSTTRG00000013068	PRPF6	100	97.875	Tursiops_truncatus
ENSMOCG00000001701	Prpf6	98	96.848	ENSUMAG00000021631	PRPF6	98	96.848	Ursus_maritimus
ENSMOCG00000001701	Prpf6	100	98.618	ENSVVUG00000014948	PRPF6	100	98.618	Vulpes_vulpes
ENSMOCG00000001701	Prpf6	100	96.493	ENSXETG00000012054	prpf6	97	96.493	Xenopus_tropicalis
ENSMOCG00000001701	Prpf6	100	93.305	ENSXCOG00000008082	prpf6	96	93.730	Xiphophorus_couchianus
ENSMOCG00000001701	Prpf6	100	93.305	ENSXMAG00000015581	prpf6	96	93.730	Xiphophorus_maculatus