EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000002038 (Gene tree)
Gene ID: 101983012
Gene Symbol: Bms1
Alias: Bms1l
Full Name: BMS1%2C ribosome biogenesis factor
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 40503 bases
Position: chrJH996431.1:32518366-32558868
Accession: 101983012
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000002603	AARP2CN	PF08142.12	1.1e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000002762	-	3852	XM_005365087	ENSMOCP00000002603	1284 (aa)	XP_005365144	-

Gene Model

Click here to download ENSMOCG00000002038's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000002038's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000002038	Bms1	99	85.269	ENSG00000165733	BMS1	99	85.269	Homo_sapiens
ENSMOCG00000002038	Bms1	70	71.626	ENSAPOG00000002296	bms1	99	57.359	Acanthochromis_polyacanthus
ENSMOCG00000002038	Bms1	99	84.305	ENSAMEG00000016834	BMS1	99	84.472	Ailuropoda_melanoleuca
ENSMOCG00000002038	Bms1	82	79.837	ENSACIG00000002588	bms1	89	78.295	Amphilophus_citrinellus
ENSMOCG00000002038	Bms1	84	69.979	ENSAOCG00000018088	bms1	53	65.688	Amphiprion_ocellaris
ENSMOCG00000002038	Bms1	81	71.396	ENSAPEG00000014673	bms1	53	65.145	Amphiprion_percula
ENSMOCG00000002038	Bms1	89	68.058	ENSATEG00000023465	bms1	54	66.260	Anabas_testudineus
ENSMOCG00000002038	Bms1	95	71.968	ENSAPLG00000003759	BMS1	99	72.209	Anas_platyrhynchos
ENSMOCG00000002038	Bms1	99	68.947	ENSACAG00000004537	-	99	69.361	Anolis_carolinensis
ENSMOCG00000002038	Bms1	99	84.591	ENSANAG00000023432	BMS1	99	84.723	Aotus_nancymaae
ENSMOCG00000002038	Bms1	87	67.308	ENSACLG00000001294	bms1	98	65.067	Astatotilapia_calliptera
ENSMOCG00000002038	Bms1	88	66.774	ENSAMXG00000011236	bms1	51	65.278	Astyanax_mexicanus
ENSMOCG00000002038	Bms1	99	84.867	ENSBTAG00000012878	BMS1	99	84.321	Bos_taurus
ENSMOCG00000002038	Bms1	81	51.932	WBGene00022021	Y61A9LA.10	98	52.427	Caenorhabditis_elegans
ENSMOCG00000002038	Bms1	99	85.214	ENSCJAG00000021705	BMS1	99	85.113	Callithrix_jacchus
ENSMOCG00000002038	Bms1	99	85.113	ENSCAFG00000007114	BMS1	99	85.035	Canis_familiaris
ENSMOCG00000002038	Bms1	99	85.113	ENSCAFG00020025282	BMS1	99	85.035	Canis_lupus_dingo
ENSMOCG00000002038	Bms1	99	84.699	ENSCHIG00000023251	BMS1	99	84.153	Capra_hircus
ENSMOCG00000002038	Bms1	99	79.907	ENSCAPG00000008652	BMS1	100	79.283	Cavia_aperea
ENSMOCG00000002038	Bms1	99	83.645	ENSCPOG00000000502	BMS1	100	83.022	Cavia_porcellus
ENSMOCG00000002038	Bms1	99	70.739	ENSCCAG00000024969	-	99	71.284	Cebus_capucinus
ENSMOCG00000002038	Bms1	90	63.896	ENSCATG00000008695	-	96	63.913	Cercocebus_atys
ENSMOCG00000002038	Bms1	99	84.801	ENSCATG00000030625	-	99	85.191	Cercocebus_atys
ENSMOCG00000002038	Bms1	99	83.879	ENSCLAG00000002446	BMS1	100	83.489	Chinchilla_lanigera
ENSMOCG00000002038	Bms1	99	85.347	ENSCSAG00000011118	BMS1	99	85.737	Chlorocebus_sabaeus
ENSMOCG00000002038	Bms1	99	83.204	ENSCHOG00000011055	BMS1	99	82.893	Choloepus_hoffmanni
ENSMOCG00000002038	Bms1	99	72.490	ENSCPBG00000025581	BMS1	99	72.319	Chrysemys_picta_bellii
ENSMOCG00000002038	Bms1	83	54.560	ENSCING00000003181	-	98	52.967	Ciona_intestinalis
ENSMOCG00000002038	Bms1	68	54.831	ENSCSAVG00000004113	-	88	54.439	Ciona_savignyi
ENSMOCG00000002038	Bms1	99	85.737	ENSCANG00000011609	BMS1	99	85.269	Colobus_angolensis_palliatus
ENSMOCG00000002038	Bms1	99	91.524	ENSCGRG00001019461	Bms1	100	91.524	Cricetulus_griseus_chok1gshd
ENSMOCG00000002038	Bms1	100	91.531	ENSCGRG00000009016	Bms1	99	91.531	Cricetulus_griseus_crigri
ENSMOCG00000002038	Bms1	81	73.176	ENSCSEG00000002469	bms1	94	67.370	Cynoglossus_semilaevis
ENSMOCG00000002038	Bms1	85	68.000	ENSCVAG00000008371	bms1	96	67.127	Cyprinodon_variegatus
ENSMOCG00000002038	Bms1	88	66.719	ENSDARG00000054154	bms1	96	63.235	Danio_rerio
ENSMOCG00000002038	Bms1	99	84.484	ENSDNOG00000015761	BMS1	99	83.851	Dasypus_novemcinctus
ENSMOCG00000002038	Bms1	99	84.084	ENSDORG00000002982	Bms1	99	84.759	Dipodomys_ordii
ENSMOCG00000002038	Bms1	76	60.800	FBgn0036686	CG7728	91	59.352	Drosophila_melanogaster
ENSMOCG00000002038	Bms1	86	82.143	ENSETEG00000009554	BMS1	91	82.143	Echinops_telfairi
ENSMOCG00000002038	Bms1	99	85.725	ENSEASG00005006894	BMS1	99	85.569	Equus_asinus_asinus
ENSMOCG00000002038	Bms1	99	85.725	ENSECAG00000001358	BMS1	99	85.569	Equus_caballus
ENSMOCG00000002038	Bms1	91	66.926	ENSELUG00000001756	bms1	96	66.797	Esox_lucius
ENSMOCG00000002038	Bms1	99	85.503	ENSFCAG00000011220	BMS1	99	84.723	Felis_catus
ENSMOCG00000002038	Bms1	99	70.121	ENSFALG00000006882	BMS1	99	70.557	Ficedula_albicollis
ENSMOCG00000002038	Bms1	99	82.243	ENSFDAG00000001422	BMS1	100	81.542	Fukomys_damarensis
ENSMOCG00000002038	Bms1	85	69.136	ENSFHEG00000003367	bms1	96	66.990	Fundulus_heteroclitus
ENSMOCG00000002038	Bms1	89	64.887	ENSGMOG00000000718	bms1	86	74.495	Gadus_morhua
ENSMOCG00000002038	Bms1	99	71.209	ENSGALG00000002624	BMS1	99	70.602	Gallus_gallus
ENSMOCG00000002038	Bms1	90	64.431	ENSGACG00000015334	bms1	88	66.186	Gasterosteus_aculeatus
ENSMOCG00000002038	Bms1	99	72.763	ENSGAGG00000003467	BMS1	99	72.218	Gopherus_agassizii
ENSMOCG00000002038	Bms1	87	67.308	ENSHBUG00000022628	bms1	98	65.067	Haplochromis_burtoni
ENSMOCG00000002038	Bms1	99	82.904	ENSHGLG00000000477	BMS1	99	81.889	Heterocephalus_glaber_female
ENSMOCG00000002038	Bms1	99	82.826	ENSHGLG00100002176	BMS1	99	81.967	Heterocephalus_glaber_male
ENSMOCG00000002038	Bms1	89	66.452	ENSHCOG00000017604	bms1	98	66.148	Hippocampus_comes
ENSMOCG00000002038	Bms1	54	70.130	ENSIPUG00000017855	bms1	99	60.168	Ictalurus_punctatus
ENSMOCG00000002038	Bms1	99	85.714	ENSSTOG00000015063	BMS1	100	85.637	Ictidomys_tridecemlineatus
ENSMOCG00000002038	Bms1	99	85.335	ENSJJAG00000017328	Bms1	99	85.413	Jaculus_jaculus
ENSMOCG00000002038	Bms1	59	63.327	ENSKMAG00000021982	bms1	93	65.098	Kryptolebias_marmoratus
ENSMOCG00000002038	Bms1	82	71.526	ENSLBEG00000028208	bms1	98	64.941	Labrus_bergylta
ENSMOCG00000002038	Bms1	99	60.107	ENSLACG00000001600	BMS1	100	59.985	Latimeria_chalumnae
ENSMOCG00000002038	Bms1	84	75.056	ENSLOCG00000012914	bms1	99	63.158	Lepisosteus_oculatus
ENSMOCG00000002038	Bms1	99	82.879	ENSLAFG00000006250	BMS1	99	82.802	Loxodonta_africana
ENSMOCG00000002038	Bms1	84	85.974	ENSMFAG00000037771	BMS1	99	86.885	Macaca_fascicularis
ENSMOCG00000002038	Bms1	90	72.127	ENSMMUG00000007426	-	98	72.045	Macaca_mulatta
ENSMOCG00000002038	Bms1	85	66.819	ENSMLEG00000029084	-	97	67.249	Mandrillus_leucophaeus
ENSMOCG00000002038	Bms1	99	58.533	ENSMAMG00000020855	bms1	98	63.528	Mastacembelus_armatus
ENSMOCG00000002038	Bms1	87	67.308	ENSMZEG00005005663	bms1	98	65.067	Maylandia_zebra
ENSMOCG00000002038	Bms1	95	69.799	ENSMGAG00000001170	BMS1	99	70.216	Meleagris_gallopavo
ENSMOCG00000002038	Bms1	99	91.213	ENSMAUG00000002195	Bms1	100	91.213	Mesocricetus_auratus
ENSMOCG00000002038	Bms1	99	84.424	ENSMICG00000009977	BMS1	99	84.579	Microcebus_murinus
ENSMOCG00000002038	Bms1	85	67.490	ENSMMOG00000000977	bms1	98	66.139	Mola_mola
ENSMOCG00000002038	Bms1	99	76.110	ENSMODG00000001177	BMS1	99	76.721	Monodelphis_domestica
ENSMOCG00000002038	Bms1	97	63.158	ENSMALG00000009680	bms1	98	60.672	Monopterus_albus
ENSMOCG00000002038	Bms1	73	96.359	MGP_CAROLIEiJ_G0028785	-	86	96.359	Mus_caroli
ENSMOCG00000002038	Bms1	99	89.658	ENSMUSG00000030138	Bms1	100	89.969	Mus_musculus
ENSMOCG00000002038	Bms1	99	89.961	MGP_PahariEiJ_G0022539	Bms1	100	90.039	Mus_pahari
ENSMOCG00000002038	Bms1	99	89.556	MGP_SPRETEiJ_G0029816	Bms1	99	89.867	Mus_spretus
ENSMOCG00000002038	Bms1	99	85.569	ENSMPUG00000017276	BMS1	99	85.335	Mustela_putorius_furo
ENSMOCG00000002038	Bms1	99	84.190	ENSMLUG00000003260	BMS1	99	83.567	Myotis_lucifugus
ENSMOCG00000002038	Bms1	99	81.829	ENSNGAG00000015258	Bms1	99	76.641	Nannospalax_galili
ENSMOCG00000002038	Bms1	99	83.242	ENSNLEG00000015791	BMS1	99	83.164	Nomascus_leucogenys
ENSMOCG00000002038	Bms1	80	94.048	ENSOPRG00000005195	BMS1	81	94.048	Ochotona_princeps
ENSMOCG00000002038	Bms1	99	83.229	ENSODEG00000005554	BMS1	99	83.073	Octodon_degus
ENSMOCG00000002038	Bms1	90	68.006	ENSONIG00000007227	bms1	98	65.663	Oreochromis_niloticus
ENSMOCG00000002038	Bms1	99	74.690	ENSOANG00000000662	-	99	74.747	Ornithorhynchus_anatinus
ENSMOCG00000002038	Bms1	99	83.969	ENSOCUG00000005354	BMS1	99	82.984	Oryctolagus_cuniculus
ENSMOCG00000002038	Bms1	87	67.147	ENSORLG00000014655	bms1	97	67.520	Oryzias_latipes
ENSMOCG00000002038	Bms1	88	67.633	ENSORLG00020016246	bms1	92	67.794	Oryzias_latipes_hni
ENSMOCG00000002038	Bms1	88	67.472	ENSORLG00015014183	bms1	92	67.846	Oryzias_latipes_hsok
ENSMOCG00000002038	Bms1	88	69.044	ENSOMEG00000015042	bms1	98	67.180	Oryzias_melastigma
ENSMOCG00000002038	Bms1	99	85.248	ENSOGAG00000006511	BMS1	99	85.248	Otolemur_garnettii
ENSMOCG00000002038	Bms1	99	84.591	ENSOARG00000003900	BMS1	99	84.047	Ovis_aries
ENSMOCG00000002038	Bms1	99	81.386	ENSPPAG00000027837	BMS1	99	81.386	Pan_paniscus
ENSMOCG00000002038	Bms1	99	85.503	ENSPPRG00000001311	BMS1	99	84.801	Panthera_pardus
ENSMOCG00000002038	Bms1	99	83.788	ENSPTIG00000009652	BMS1	99	83.164	Panthera_tigris_altaica
ENSMOCG00000002038	Bms1	99	85.113	ENSPTRG00000002441	BMS1	99	85.113	Pan_troglodytes
ENSMOCG00000002038	Bms1	99	71.298	ENSPSIG00000006481	BMS1	98	72.158	Pelodiscus_sinensis
ENSMOCG00000002038	Bms1	99	84.633	ENSPEMG00000022467	Bms1	100	84.358	Peromyscus_maniculatus_bairdii
ENSMOCG00000002038	Bms1	95	89.933	ENSPCIG00000001339	BMS1	98	85.434	Phascolarctos_cinereus
ENSMOCG00000002038	Bms1	86	66.528	ENSPFOG00000015180	bms1	99	65.158	Poecilia_formosa
ENSMOCG00000002038	Bms1	81	74.631	ENSPMEG00000023176	bms1	93	65.887	Poecilia_mexicana
ENSMOCG00000002038	Bms1	79	73.350	ENSPREG00000002695	bms1	98	65.113	Poecilia_reticulata
ENSMOCG00000002038	Bms1	61	81.714	ENSPPYG00000002836	-	99	81.074	Pongo_abelii
ENSMOCG00000002038	Bms1	73	95.238	ENSPCAG00000014528	BMS1	73	95.238	Procavia_capensis
ENSMOCG00000002038	Bms1	95	80.567	ENSPCOG00000023834	-	99	80.486	Propithecus_coquereli
ENSMOCG00000002038	Bms1	99	83.203	ENSPVAG00000000725	BMS1	99	82.188	Pteropus_vampyrus
ENSMOCG00000002038	Bms1	87	67.690	ENSPNYG00000018866	bms1	90	64.781	Pundamilia_nyererei
ENSMOCG00000002038	Bms1	82	88.297	ENSRNOG00000006576	Bms1	100	88.487	Rattus_norvegicus
ENSMOCG00000002038	Bms1	99	83.164	ENSRROG00000040101	BMS1	99	83.476	Rhinopithecus_roxellana
ENSMOCG00000002038	Bms1	73	46.012	YPL217C	-	79	48.826	Saccharomyces_cerevisiae
ENSMOCG00000002038	Bms1	99	85.659	ENSSBOG00000035778	BMS1	99	86.048	Saimiri_boliviensis_boliviensis
ENSMOCG00000002038	Bms1	99	75.268	ENSSHAG00000005062	BMS1	99	75.019	Sarcophilus_harrisii
ENSMOCG00000002038	Bms1	99	61.072	ENSSFOG00015022313	bms1	99	60.987	Scleropages_formosus
ENSMOCG00000002038	Bms1	88	68.123	ENSSLDG00000015199	bms1	98	60.290	Seriola_lalandi_dorsalis
ENSMOCG00000002038	Bms1	70	72.859	ENSSARG00000014407	BMS1	100	72.859	Sorex_araneus
ENSMOCG00000002038	Bms1	99	71.988	ENSSPUG00000014454	BMS1	99	71.582	Sphenodon_punctatus
ENSMOCG00000002038	Bms1	99	85.569	ENSSSCG00000010198	BMS1	99	85.413	Sus_scrofa
ENSMOCG00000002038	Bms1	99	70.606	ENSTGUG00000006302	-	99	70.356	Taeniopygia_guttata
ENSMOCG00000002038	Bms1	87	63.813	ENSTRUG00000008028	bms1	97	63.168	Takifugu_rubripes
ENSMOCG00000002038	Bms1	99	57.940	ENSTNIG00000006216	bms1	93	64.573	Tetraodon_nigroviridis
ENSMOCG00000002038	Bms1	60	89.116	ENSTBEG00000001673	-	64	88.197	Tupaia_belangeri
ENSMOCG00000002038	Bms1	99	82.307	ENSTTRG00000007983	BMS1	99	82.151	Tursiops_truncatus
ENSMOCG00000002038	Bms1	99	85.569	ENSUAMG00000023996	BMS1	99	85.335	Ursus_americanus
ENSMOCG00000002038	Bms1	99	85.491	ENSUMAG00000016523	BMS1	99	85.257	Ursus_maritimus
ENSMOCG00000002038	Bms1	88	78.716	ENSVPAG00000007477	BMS1	99	78.980	Vicugna_pacos
ENSMOCG00000002038	Bms1	99	85.035	ENSVVUG00000021305	BMS1	99	84.957	Vulpes_vulpes
ENSMOCG00000002038	Bms1	98	64.016	ENSXETG00000008158	bms1	99	64.688	Xenopus_tropicalis
ENSMOCG00000002038	Bms1	87	65.916	ENSXCOG00000000506	bms1	93	75.879	Xiphophorus_couchianus
ENSMOCG00000002038	Bms1	85	66.883	ENSXMAG00000014236	bms1	98	65.250	Xiphophorus_maculatus