EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000002054 (Gene tree)
Gene ID: 101979621
Gene Symbol: Zc3h6
Alias: 4631426G04Rik|4833425H18Rik
Full Name: zinc finger CCCH-type containing 6
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 57192 bases
Position: chrJH996433.1:18655181-18712372
Accession: 101979621
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000002611	zf-CCCH	PF00642.24	1.1e-11	1	2
ENSMOCP00000002611	zf-CCCH	PF00642.24	1.1e-11	2	2
ENSMOCP00000002613	zf-CCCH	PF00642.24	1.5e-10	1	2
ENSMOCP00000002613	zf-CCCH	PF00642.24	1.5e-10	2	2
ENSMOCP00000002613	zf-CCCH_2	PF14608.6	1.2e-05	1	3
ENSMOCP00000002613	zf-CCCH_2	PF14608.6	1.2e-05	2	3
ENSMOCP00000002613	zf-CCCH_2	PF14608.6	1.2e-05	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000002771	-	3519	XM_005365650	ENSMOCP00000002611	1172 (aa)	XP_005365707	UPI00038C4244
ENSMOCT00000002773	-	3519	-	ENSMOCP00000002613	1172 (aa)	-	-

Gene Model

Click here to download ENSMOCG00000002054's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000002054's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000002054	Zc3h6	100	78.235	ENSG00000188177	ZC3H6	100	78.151	Homo_sapiens
ENSMOCG00000002054	Zc3h6	62	64.904	ENSAPOG00000002681	zc3h6	84	47.799	Acanthochromis_polyacanthus
ENSMOCG00000002054	Zc3h6	100	75.294	ENSAMEG00000016194	ZC3H6	100	74.622	Ailuropoda_melanoleuca
ENSMOCG00000002054	Zc3h6	61	67.358	ENSACIG00000021843	zc3h6	68	67.358	Amphilophus_citrinellus
ENSMOCG00000002054	Zc3h6	62	64.904	ENSAOCG00000004039	zc3h6	84	47.182	Amphiprion_ocellaris
ENSMOCG00000002054	Zc3h6	62	64.904	ENSAPEG00000014561	zc3h6	84	46.764	Amphiprion_percula
ENSMOCG00000002054	Zc3h6	80	40.080	ENSATEG00000019063	zc3h6	84	47.146	Anabas_testudineus
ENSMOCG00000002054	Zc3h6	99	57.734	ENSAPLG00000014287	ZC3H6	99	58.230	Anas_platyrhynchos
ENSMOCG00000002054	Zc3h6	100	77.246	ENSANAG00000024229	ZC3H6	100	76.910	Aotus_nancymaae
ENSMOCG00000002054	Zc3h6	82	44.231	ENSACLG00000026343	zc3h6	88	45.627	Astatotilapia_calliptera
ENSMOCG00000002054	Zc3h6	100	77.582	ENSCJAG00000016479	ZC3H6	100	77.246	Callithrix_jacchus
ENSMOCG00000002054	Zc3h6	100	75.442	ENSCAFG00000007160	ZC3H6	100	74.853	Canis_familiaris
ENSMOCG00000002054	Zc3h6	100	73.759	ENSCAFG00020017525	ZC3H6	100	73.171	Canis_lupus_dingo
ENSMOCG00000002054	Zc3h6	81	71.204	ENSCHIG00000019719	-	97	70.890	Capra_hircus
ENSMOCG00000002054	Zc3h6	100	77.143	ENSTSYG00000031857	ZC3H6	100	76.471	Carlito_syrichta
ENSMOCG00000002054	Zc3h6	99	72.704	ENSCPOG00000003445	ZC3H6	100	73.083	Cavia_porcellus
ENSMOCG00000002054	Zc3h6	100	78.235	ENSCATG00000036595	ZC3H6	100	78.151	Cercocebus_atys
ENSMOCG00000002054	Zc3h6	90	75.701	ENSCLAG00000006605	ZC3H6	100	75.794	Chinchilla_lanigera
ENSMOCG00000002054	Zc3h6	90	77.009	ENSCSAG00000016793	ZC3H6	100	76.916	Chlorocebus_sabaeus
ENSMOCG00000002054	Zc3h6	99	78.117	ENSCANG00000041036	ZC3H6	100	78.032	Colobus_angolensis_palliatus
ENSMOCG00000002054	Zc3h6	99	87.009	ENSCGRG00001022022	Zc3h6	99	87.009	Cricetulus_griseus_chok1gshd
ENSMOCG00000002054	Zc3h6	99	89.222	ENSCGRG00000016162	Zc3h6	100	89.222	Cricetulus_griseus_crigri
ENSMOCG00000002054	Zc3h6	68	54.152	ENSCSEG00000012267	zc3h6	78	62.222	Cynoglossus_semilaevis
ENSMOCG00000002054	Zc3h6	99	68.639	ENSDNOG00000044811	ZC3H6	100	69.113	Dasypus_novemcinctus
ENSMOCG00000002054	Zc3h6	99	75.212	ENSDORG00000013967	Zc3h6	100	75.212	Dipodomys_ordii
ENSMOCG00000002054	Zc3h6	83	75.455	ENSEASG00005006493	ZC3H6	99	75.455	Equus_asinus_asinus
ENSMOCG00000002054	Zc3h6	100	76.955	ENSECAG00000023620	ZC3H6	100	76.619	Equus_caballus
ENSMOCG00000002054	Zc3h6	82	69.714	ENSEEUG00000013883	-	84	69.905	Erinaceus_europaeus
ENSMOCG00000002054	Zc3h6	100	76.535	ENSFCAG00000008089	ZC3H6	100	76.114	Felis_catus
ENSMOCG00000002054	Zc3h6	99	58.048	ENSFALG00000011589	ZC3H6	99	58.382	Ficedula_albicollis
ENSMOCG00000002054	Zc3h6	99	76.211	ENSFDAG00000002521	ZC3H6	99	76.126	Fukomys_damarensis
ENSMOCG00000002054	Zc3h6	99	57.947	ENSGALG00000008269	ZC3H6	98	59.091	Gallus_gallus
ENSMOCG00000002054	Zc3h6	61	62.694	ENSGAFG00000006771	zc3h6	77	61.658	Gambusia_affinis
ENSMOCG00000002054	Zc3h6	61	65.625	ENSGACG00000005343	zc3h6	92	44.007	Gasterosteus_aculeatus
ENSMOCG00000002054	Zc3h6	99	60.568	ENSGAGG00000010857	ZC3H6	100	60.000	Gopherus_agassizii
ENSMOCG00000002054	Zc3h6	100	78.319	ENSGGOG00000001665	ZC3H6	100	78.235	Gorilla_gorilla
ENSMOCG00000002054	Zc3h6	82	44.231	ENSHBUG00000010088	zc3h6	88	45.627	Haplochromis_burtoni
ENSMOCG00000002054	Zc3h6	99	75.786	ENSHGLG00000011882	ZC3H6	96	75.871	Heterocephalus_glaber_female
ENSMOCG00000002054	Zc3h6	99	74.276	ENSHGLG00100002559	ZC3H6	100	74.276	Heterocephalus_glaber_male
ENSMOCG00000002054	Zc3h6	99	36.179	ENSHCOG00000012519	zc3h6	87	45.283	Hippocampus_comes
ENSMOCG00000002054	Zc3h6	90	76.757	ENSSTOG00000008120	-	100	76.570	Ictidomys_tridecemlineatus
ENSMOCG00000002054	Zc3h6	100	78.517	ENSJJAG00000013206	Zc3h6	100	78.433	Jaculus_jaculus
ENSMOCG00000002054	Zc3h6	61	65.625	ENSKMAG00000016252	zc3h6	85	47.257	Kryptolebias_marmoratus
ENSMOCG00000002054	Zc3h6	59	63.235	ENSLBEG00000003054	zc3h6	78	49.541	Labrus_bergylta
ENSMOCG00000002054	Zc3h6	99	46.203	ENSLACG00000012014	ZC3H6	100	47.068	Latimeria_chalumnae
ENSMOCG00000002054	Zc3h6	100	43.180	ENSLOCG00000016548	zc3h6	98	44.043	Lepisosteus_oculatus
ENSMOCG00000002054	Zc3h6	92	71.273	ENSLAFG00000001151	ZC3H6	99	71.237	Loxodonta_africana
ENSMOCG00000002054	Zc3h6	100	78.235	ENSMFAG00000036963	ZC3H6	100	78.151	Macaca_fascicularis
ENSMOCG00000002054	Zc3h6	100	78.151	ENSMMUG00000016430	ZC3H6	100	78.067	Macaca_mulatta
ENSMOCG00000002054	Zc3h6	100	77.983	ENSMNEG00000031225	ZC3H6	100	77.899	Macaca_nemestrina
ENSMOCG00000002054	Zc3h6	100	78.319	ENSMLEG00000038821	ZC3H6	100	78.235	Mandrillus_leucophaeus
ENSMOCG00000002054	Zc3h6	89	42.495	ENSMAMG00000021546	zc3h6	92	44.538	Mastacembelus_armatus
ENSMOCG00000002054	Zc3h6	82	44.231	ENSMZEG00005006828	zc3h6	88	45.627	Maylandia_zebra
ENSMOCG00000002054	Zc3h6	99	58.017	ENSMGAG00000003025	ZC3H6	99	58.760	Meleagris_gallopavo
ENSMOCG00000002054	Zc3h6	100	88.898	ENSMAUG00000017009	Zc3h6	100	88.898	Mesocricetus_auratus
ENSMOCG00000002054	Zc3h6	100	77.815	ENSMICG00000036353	ZC3H6	100	77.227	Microcebus_murinus
ENSMOCG00000002054	Zc3h6	99	61.538	ENSMODG00000006612	ZC3H6	100	61.037	Monodelphis_domestica
ENSMOCG00000002054	Zc3h6	61	65.990	ENSMALG00000002048	zc3h6	87	42.763	Monopterus_albus
ENSMOCG00000002054	Zc3h6	100	83.531	MGP_CAROLIEiJ_G0024278	Zc3h6	100	83.531	Mus_caroli
ENSMOCG00000002054	Zc3h6	100	83.701	ENSMUSG00000042851	Zc3h6	100	83.701	Mus_musculus
ENSMOCG00000002054	Zc3h6	100	83.616	MGP_PahariEiJ_G0025723	Zc3h6	100	83.616	Mus_pahari
ENSMOCG00000002054	Zc3h6	100	84.126	MGP_SPRETEiJ_G0025198	Zc3h6	100	84.126	Mus_spretus
ENSMOCG00000002054	Zc3h6	90	73.669	ENSMPUG00000009624	ZC3H6	100	73.203	Mustela_putorius_furo
ENSMOCG00000002054	Zc3h6	99	71.909	ENSMLUG00000004896	ZC3H6	99	72.077	Myotis_lucifugus
ENSMOCG00000002054	Zc3h6	94	77.728	ENSNGAG00000013596	Zc3h6	99	78.038	Nannospalax_galili
ENSMOCG00000002054	Zc3h6	60	65.196	ENSNBRG00000015382	zc3h6	71	57.312	Neolamprologus_brichardi
ENSMOCG00000002054	Zc3h6	99	77.138	ENSNLEG00000033657	ZC3H6	99	77.053	Nomascus_leucogenys
ENSMOCG00000002054	Zc3h6	100	73.025	ENSOPRG00000012717	ZC3H6	95	82.271	Ochotona_princeps
ENSMOCG00000002054	Zc3h6	94	74.332	ENSODEG00000009099	ZC3H6	99	74.619	Octodon_degus
ENSMOCG00000002054	Zc3h6	82	43.617	ENSONIG00000009880	zc3h6	84	47.780	Oreochromis_niloticus
ENSMOCG00000002054	Zc3h6	99	62.732	ENSOANG00000012054	-	96	62.732	Ornithorhynchus_anatinus
ENSMOCG00000002054	Zc3h6	95	74.934	ENSOCUG00000011125	ZC3H6	100	73.856	Oryctolagus_cuniculus
ENSMOCG00000002054	Zc3h6	67	68.229	ENSORLG00000011179	zc3h6	86	49.145	Oryzias_latipes
ENSMOCG00000002054	Zc3h6	82	44.161	ENSORLG00020017202	zc3h6	86	49.145	Oryzias_latipes_hni
ENSMOCG00000002054	Zc3h6	89	44.374	ENSORLG00015001664	zc3h6	86	49.359	Oryzias_latipes_hsok
ENSMOCG00000002054	Zc3h6	82	46.681	ENSOMEG00000001296	zc3h6	86	49.359	Oryzias_melastigma
ENSMOCG00000002054	Zc3h6	99	77.119	ENSOGAG00000002556	ZC3H6	100	76.441	Otolemur_garnettii
ENSMOCG00000002054	Zc3h6	100	73.636	ENSOARG00000014503	ZC3H6	100	72.796	Ovis_aries
ENSMOCG00000002054	Zc3h6	99	77.947	ENSPPAG00000030495	ZC3H6	100	77.863	Pan_paniscus
ENSMOCG00000002054	Zc3h6	100	76.787	ENSPPRG00000005673	ZC3H6	100	76.367	Panthera_pardus
ENSMOCG00000002054	Zc3h6	99	75.552	ENSPTIG00000015800	ZC3H6	99	75.127	Panthera_tigris_altaica
ENSMOCG00000002054	Zc3h6	100	78.151	ENSPTRG00000012363	ZC3H6	100	78.067	Pan_troglodytes
ENSMOCG00000002054	Zc3h6	100	78.067	ENSPANG00000025224	ZC3H6	100	77.983	Papio_anubis
ENSMOCG00000002054	Zc3h6	62	67.708	ENSPKIG00000007353	zc3h6	97	67.708	Paramormyrops_kingsleyae
ENSMOCG00000002054	Zc3h6	98	60.504	ENSPSIG00000002520	ZC3H6	100	60.336	Pelodiscus_sinensis
ENSMOCG00000002054	Zc3h6	99	86.842	ENSPEMG00000000918	Zc3h6	100	86.842	Peromyscus_maniculatus_bairdii
ENSMOCG00000002054	Zc3h6	90	64.630	ENSPCIG00000029741	ZC3H6	100	64.259	Phascolarctos_cinereus
ENSMOCG00000002054	Zc3h6	61	65.625	ENSPFOG00000015748	zc3h6	86	48.485	Poecilia_formosa
ENSMOCG00000002054	Zc3h6	61	65.625	ENSPLAG00000002469	zc3h6	86	48.485	Poecilia_latipinna
ENSMOCG00000002054	Zc3h6	61	65.625	ENSPMEG00000020802	zc3h6	83	66.310	Poecilia_mexicana
ENSMOCG00000002054	Zc3h6	62	63.107	ENSPREG00000023126	zc3h6	90	41.164	Poecilia_reticulata
ENSMOCG00000002054	Zc3h6	78	68.716	ENSPCAG00000015468	ZC3H6	79	67.869	Procavia_capensis
ENSMOCG00000002054	Zc3h6	100	77.899	ENSPCOG00000016627	ZC3H6	100	77.479	Propithecus_coquereli
ENSMOCG00000002054	Zc3h6	69	88.119	ENSPVAG00000013728	ZC3H6	70	88.119	Pteropus_vampyrus
ENSMOCG00000002054	Zc3h6	62	64.706	ENSPNYG00000018130	zc3h6	73	56.917	Pundamilia_nyererei
ENSMOCG00000002054	Zc3h6	79	41.709	ENSPNAG00000009331	zc3h6	98	39.524	Pygocentrus_nattereri
ENSMOCG00000002054	Zc3h6	100	83.672	ENSRNOG00000026277	Zc3h6	100	84.010	Rattus_norvegicus
ENSMOCG00000002054	Zc3h6	100	77.414	ENSSBOG00000033489	ZC3H6	100	77.078	Saimiri_boliviensis_boliviensis
ENSMOCG00000002054	Zc3h6	83	64.121	ENSSHAG00000016634	ZC3H6	100	64.121	Sarcophilus_harrisii
ENSMOCG00000002054	Zc3h6	100	38.653	ENSSFOG00015004488	zc3h6	98	39.602	Scleropages_formosus
ENSMOCG00000002054	Zc3h6	62	64.216	ENSSMAG00000008411	zc3h6	91	43.333	Scophthalmus_maximus
ENSMOCG00000002054	Zc3h6	61	67.708	ENSSDUG00000006105	zc3h6	84	47.992	Seriola_dumerili
ENSMOCG00000002054	Zc3h6	61	67.708	ENSSLDG00000021813	zc3h6	84	47.992	Seriola_lalandi_dorsalis
ENSMOCG00000002054	Zc3h6	99	69.499	ENSSARG00000001035	ZC3H6	100	69.015	Sorex_araneus
ENSMOCG00000002054	Zc3h6	55	61.417	ENSSPUG00000013031	-	89	34.441	Sphenodon_punctatus
ENSMOCG00000002054	Zc3h6	100	75.694	ENSSSCG00000008096	ZC3H6	100	75.021	Sus_scrofa
ENSMOCG00000002054	Zc3h6	99	57.486	ENSTGUG00000007468	ZC3H6	100	58.161	Taeniopygia_guttata
ENSMOCG00000002054	Zc3h6	82	42.644	ENSTRUG00000012901	zc3h6	85	45.085	Takifugu_rubripes
ENSMOCG00000002054	Zc3h6	61	63.547	ENSTNIG00000016608	zc3h6	90	48.179	Tetraodon_nigroviridis
ENSMOCG00000002054	Zc3h6	85	79.636	ENSTBEG00000016232	ZC3H6	92	76.976	Tupaia_belangeri
ENSMOCG00000002054	Zc3h6	76	85.149	ENSTTRG00000013154	ZC3H6	75	85.149	Tursiops_truncatus
ENSMOCG00000002054	Zc3h6	90	73.527	ENSUAMG00000002401	ZC3H6	100	72.778	Ursus_americanus
ENSMOCG00000002054	Zc3h6	90	73.527	ENSUMAG00000008663	ZC3H6	100	74.037	Ursus_maritimus
ENSMOCG00000002054	Zc3h6	99	74.153	ENSVPAG00000005912	ZC3H6	100	73.559	Vicugna_pacos
ENSMOCG00000002054	Zc3h6	90	74.369	ENSVVUG00000028662	ZC3H6	100	73.620	Vulpes_vulpes
ENSMOCG00000002054	Zc3h6	77	56.812	ENSXETG00000013762	zc3h6	88	57.796	Xenopus_tropicalis
ENSMOCG00000002054	Zc3h6	53	60.360	ENSXCOG00000011662	zc3h6	71	53.875	Xiphophorus_couchianus
ENSMOCG00000002054	Zc3h6	61	65.625	ENSXMAG00000020822	zc3h6	86	47.368	Xiphophorus_maculatus