EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000002138 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: 60S ribosomal protein L39 pseudogene
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 156 bases
Position: chr8:61653012-61653167
Accession: 102002002
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000002693	Ribosomal_L39	PF00832.20	1.2e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000002865	-	156	-	ENSMOCP00000002693	51 (aa)	-	UPI00006D3002

Gene Model

Click here to download ENSMOCG00000002138's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000002138's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000002138	-	100	98.039	ENSMOCG00000003914	-	100	98.039
ENSMOCG00000002138	-	100	94.118	ENSMOCG00000005535	-	100	94.118
ENSMOCG00000002138	-	100	92.157	ENSMOCG00000001545	Rpl39l	100	92.157
ENSMOCG00000002138	-	100	96.078	ENSMOCG00000002794	-	100	96.078
ENSMOCG00000002138	-	100	98.039	ENSMOCG00000010499	-	100	98.039
ENSMOCG00000002138	-	92	97.872	ENSMOCG00000008820	-	100	97.872
ENSMOCG00000002138	-	100	94.118	ENSMOCG00000005250	-	100	94.118
ENSMOCG00000002138	-	100	96.078	ENSMOCG00000001977	-	100	96.078
ENSMOCG00000002138	-	100	96.078	ENSMOCG00000006299	-	100	96.078

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000002138	-	100	100.000	ENSAMEG00000019848	-	100	100.000	Ailuropoda_melanoleuca
ENSMOCG00000002138	-	100	92.157	ENSANAG00000016436	-	100	92.157	Aotus_nancymaae
ENSMOCG00000002138	-	100	100.000	ENSANAG00000031418	-	100	100.000	Aotus_nancymaae
ENSMOCG00000002138	-	100	98.039	ENSANAG00000016046	-	100	98.039	Aotus_nancymaae
ENSMOCG00000002138	-	100	96.078	ENSCAFG00020023883	-	100	96.078	Canis_lupus_dingo
ENSMOCG00000002138	-	100	92.157	ENSCAFG00020027515	-	100	92.157	Canis_lupus_dingo
ENSMOCG00000002138	-	100	98.039	ENSCAFG00020026664	-	100	98.039	Canis_lupus_dingo
ENSMOCG00000002138	-	100	96.078	ENSCAFG00020002578	-	100	96.078	Canis_lupus_dingo
ENSMOCG00000002138	-	100	98.039	ENSCAFG00020009904	-	100	98.039	Canis_lupus_dingo
ENSMOCG00000002138	-	90	91.304	ENSTSYG00000026787	-	82	91.304	Carlito_syrichta
ENSMOCG00000002138	-	100	96.078	ENSTSYG00000026785	-	100	96.078	Carlito_syrichta
ENSMOCG00000002138	-	100	100.000	ENSCAPG00000007210	-	100	100.000	Cavia_aperea
ENSMOCG00000002138	-	100	100.000	ENSCPOG00000036636	-	100	100.000	Cavia_porcellus
ENSMOCG00000002138	-	100	98.039	ENSCLAG00000017874	-	100	98.039	Chinchilla_lanigera
ENSMOCG00000002138	-	100	94.118	ENSCLAG00000017707	-	100	94.118	Chinchilla_lanigera
ENSMOCG00000002138	-	100	96.078	ENSCGRG00001012052	-	100	96.078	Cricetulus_griseus_chok1gshd
ENSMOCG00000002138	-	100	86.275	ENSCGRG00001008057	-	100	86.275	Cricetulus_griseus_chok1gshd
ENSMOCG00000002138	-	100	94.118	ENSCGRG00001003230	Rpl39l	100	94.118	Cricetulus_griseus_chok1gshd
ENSMOCG00000002138	-	100	96.078	ENSCGRG00000019654	-	100	96.078	Cricetulus_griseus_crigri
ENSMOCG00000002138	-	100	94.118	ENSCGRG00000018615	Rpl39l	100	94.118	Cricetulus_griseus_crigri
ENSMOCG00000002138	-	100	98.039	ENSDORG00000028485	-	100	98.039	Dipodomys_ordii
ENSMOCG00000002138	-	100	96.078	ENSDORG00000027732	-	100	96.078	Dipodomys_ordii
ENSMOCG00000002138	-	100	75.000	ENSFCAG00000038709	-	91	75.000	Felis_catus
ENSMOCG00000002138	-	100	82.353	ENSFCAG00000044333	RPL39L	100	82.353	Felis_catus
ENSMOCG00000002138	-	100	96.078	ENSFDAG00000021400	-	100	96.078	Fukomys_damarensis
ENSMOCG00000002138	-	92	93.617	ENSGGOG00000040312	-	65	93.617	Gorilla_gorilla
ENSMOCG00000002138	-	100	92.157	ENSGGOG00000036596	-	100	92.157	Gorilla_gorilla
ENSMOCG00000002138	-	100	96.078	ENSHGLG00000020604	-	100	96.078	Heterocephalus_glaber_female
ENSMOCG00000002138	-	100	96.078	ENSHGLG00100011216	-	100	96.078	Heterocephalus_glaber_male
ENSMOCG00000002138	-	100	98.039	ENSSTOG00000028051	-	100	98.039	Ictidomys_tridecemlineatus
ENSMOCG00000002138	-	100	100.000	ENSSTOG00000030492	-	100	100.000	Ictidomys_tridecemlineatus
ENSMOCG00000002138	-	100	92.157	ENSJJAG00000010041	-	100	92.157	Jaculus_jaculus
ENSMOCG00000002138	-	100	96.078	ENSLAFG00000028648	-	100	96.078	Loxodonta_africana
ENSMOCG00000002138	-	100	98.039	ENSMFAG00000020492	-	100	98.039	Macaca_fascicularis
ENSMOCG00000002138	-	100	100.000	ENSMMUG00000044527	-	100	100.000	Macaca_mulatta
ENSMOCG00000002138	-	100	94.118	ENSMMUG00000038479	-	100	94.118	Macaca_mulatta
ENSMOCG00000002138	-	100	98.039	ENSMMUG00000045452	-	100	98.039	Macaca_mulatta
ENSMOCG00000002138	-	100	92.157	ENSMNEG00000001683	-	68	92.157	Macaca_nemestrina
ENSMOCG00000002138	-	100	98.039	ENSMNEG00000000126	-	100	98.039	Macaca_nemestrina
ENSMOCG00000002138	-	98	98.000	ENSMLEG00000000739	-	100	98.000	Mandrillus_leucophaeus
ENSMOCG00000002138	-	100	98.039	ENSMLEG00000018088	-	100	98.039	Mandrillus_leucophaeus
ENSMOCG00000002138	-	100	94.118	ENSMLEG00000009433	-	100	94.118	Mandrillus_leucophaeus
ENSMOCG00000002138	-	100	100.000	ENSMLEG00000003517	-	100	100.000	Mandrillus_leucophaeus
ENSMOCG00000002138	-	100	94.118	ENSMAUG00000002516	-	100	94.118	Mesocricetus_auratus
ENSMOCG00000002138	-	100	94.118	ENSMAUG00000015776	Rpl39l	100	94.118	Mesocricetus_auratus
ENSMOCG00000002138	-	100	96.078	MGP_CAROLIEiJ_G0020438	Rpl39l	100	96.078	Mus_caroli
ENSMOCG00000002138	-	100	96.078	ENSMUSG00000039209	Rpl39l	100	96.078	Mus_musculus
ENSMOCG00000002138	-	100	96.078	MGP_SPRETEiJ_G0021332	Rpl39l	100	96.078	Mus_spretus
ENSMOCG00000002138	-	100	92.157	ENSMLUG00000025012	-	100	92.157	Myotis_lucifugus
ENSMOCG00000002138	-	100	92.157	ENSMLUG00000015029	-	100	92.157	Myotis_lucifugus
ENSMOCG00000002138	-	90	91.304	ENSNGAG00000022494	-	96	91.304	Nannospalax_galili
ENSMOCG00000002138	-	100	90.196	ENSNGAG00000008665	-	100	90.196	Nannospalax_galili
ENSMOCG00000002138	-	100	94.118	ENSNGAG00000012570	Rpl39l	100	94.118	Nannospalax_galili
ENSMOCG00000002138	-	100	98.039	ENSODEG00000020114	-	100	98.039	Octodon_degus
ENSMOCG00000002138	-	100	94.118	ENSOGAG00000024799	-	100	94.118	Otolemur_garnettii
ENSMOCG00000002138	-	100	90.196	ENSPPRG00000020779	-	100	90.196	Panthera_pardus
ENSMOCG00000002138	-	100	92.157	ENSPTIG00000006209	-	100	92.157	Panthera_tigris_altaica
ENSMOCG00000002138	-	98	98.000	ENSPANG00000030226	-	100	98.000	Papio_anubis
ENSMOCG00000002138	-	100	96.078	ENSRNOG00000032300	Rpl39l	100	96.078	Rattus_norvegicus
ENSMOCG00000002138	-	100	98.039	ENSRBIG00000010842	-	100	98.039	Rhinopithecus_bieti
ENSMOCG00000002138	-	100	98.039	ENSRROG00000037724	-	100	98.039	Rhinopithecus_roxellana
ENSMOCG00000002138	-	100	98.039	ENSRROG00000023025	-	100	98.039	Rhinopithecus_roxellana
ENSMOCG00000002138	-	100	88.235	ENSSSCG00000033224	-	100	88.235	Sus_scrofa
ENSMOCG00000002138	-	100	94.118	ENSSSCG00000038385	-	69	94.118	Sus_scrofa
ENSMOCG00000002138	-	90	93.478	ENSUAMG00000000067	-	98	93.478	Ursus_americanus
ENSMOCG00000002138	-	100	100.000	ENSUAMG00000020990	-	100	100.000	Ursus_americanus
ENSMOCG00000002138	-	100	100.000	ENSUMAG00000015280	-	100	100.000	Ursus_maritimus
ENSMOCG00000002138	-	98	96.000	ENSVVUG00000022951	-	100	96.000	Vulpes_vulpes
ENSMOCG00000002138	-	100	100.000	ENSVVUG00000030147	-	100	100.000	Vulpes_vulpes
ENSMOCG00000002138	-	100	90.196	ENSVVUG00000014095	-	100	90.196	Vulpes_vulpes