EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000002646 (Gene tree)
Gene ID: 101982884
Gene Symbol: R3hdm4
Alias: C030046I01Rik
Full Name: R3H domain containing 4
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 6142 bases
Position: chrLG1:3879897-3886038
Accession: 101982884
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000003341	R3H	PF01424.22	5.4e-05	1	1
ENSMOCP00000003333	R3H	PF01424.22	5.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000003576	-	780	-	ENSMOCP00000003341	259 (aa)	-	-
ENSMOCT00000003568	-	1682	XM_005359095	ENSMOCP00000003333	263 (aa)	XP_005359152	UPI00038C3932
ENSMOCT00000003578	-	804	-	ENSMOCP00000003343	267 (aa)	-	-

Gene Model

Click here to download ENSMOCG00000002646's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000002646's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000002646	R3hdm4	100	84.644	ENSG00000198858	R3HDM4	99	84.270	Homo_sapiens
ENSMOCG00000002646	R3hdm4	92	86.008	ENSAMEG00000003001	R3HDM4	99	85.597	Ailuropoda_melanoleuca
ENSMOCG00000002646	R3hdm4	89	55.745	ENSACIG00000004672	r3hdm4	91	54.894	Amphilophus_citrinellus
ENSMOCG00000002646	R3hdm4	88	54.506	ENSATEG00000015913	r3hdm4	91	54.077	Anabas_testudineus
ENSMOCG00000002646	R3hdm4	92	87.603	ENSANAG00000029748	R3HDM4	99	87.190	Aotus_nancymaae
ENSMOCG00000002646	R3hdm4	97	84.375	ENSBTAG00000046406	R3HDM4	99	81.550	Bos_taurus
ENSMOCG00000002646	R3hdm4	95	85.600	ENSCJAG00000020114	R3HDM4	93	85.200	Callithrix_jacchus
ENSMOCG00000002646	R3hdm4	100	82.657	ENSCAFG00000019665	R3HDM4	99	82.288	Canis_familiaris
ENSMOCG00000002646	R3hdm4	100	82.288	ENSCAFG00020016880	R3HDM4	99	81.919	Canis_lupus_dingo
ENSMOCG00000002646	R3hdm4	100	82.288	ENSCHIG00000020110	R3HDM4	99	83.525	Capra_hircus
ENSMOCG00000002646	R3hdm4	98	82.558	ENSCCAG00000019955	R3HDM4	93	82.171	Cebus_capucinus
ENSMOCG00000002646	R3hdm4	100	82.528	ENSCATG00000037269	R3HDM4	99	82.900	Cercocebus_atys
ENSMOCG00000002646	R3hdm4	92	88.066	ENSCLAG00000007094	R3HDM4	99	87.654	Chinchilla_lanigera
ENSMOCG00000002646	R3hdm4	100	83.895	ENSCSAG00000012574	R3HDM4	99	83.521	Chlorocebus_sabaeus
ENSMOCG00000002646	R3hdm4	99	66.160	ENSCPBG00000009805	R3HDM4	99	65.779	Chrysemys_picta_bellii
ENSMOCG00000002646	R3hdm4	92	87.705	ENSCANG00000040439	R3HDM4	86	87.295	Colobus_angolensis_palliatus
ENSMOCG00000002646	R3hdm4	100	94.717	ENSCGRG00001021650	R3hdm4	100	95.472	Cricetulus_griseus_chok1gshd
ENSMOCG00000002646	R3hdm4	100	94.717	ENSCGRG00000013169	R3hdm4	100	95.472	Cricetulus_griseus_crigri
ENSMOCG00000002646	R3hdm4	89	52.542	ENSCSEG00000018211	r3hdm4	91	51.489	Cynoglossus_semilaevis
ENSMOCG00000002646	R3hdm4	89	54.661	ENSCVAG00000017127	r3hdm4	91	54.894	Cyprinodon_variegatus
ENSMOCG00000002646	R3hdm4	94	87.251	ENSDORG00000006605	R3hdm4	100	88.980	Dipodomys_ordii
ENSMOCG00000002646	R3hdm4	92	89.712	ENSEASG00005021556	R3HDM4	88	89.300	Equus_asinus_asinus
ENSMOCG00000002646	R3hdm4	92	89.754	ENSECAG00000000003	R3HDM4	99	84.815	Equus_caballus
ENSMOCG00000002646	R3hdm4	100	83.271	ENSFCAG00000042437	R3HDM4	99	82.900	Felis_catus
ENSMOCG00000002646	R3hdm4	90	68.067	ENSFALG00000013938	R3HDM4	98	67.647	Ficedula_albicollis
ENSMOCG00000002646	R3hdm4	92	86.475	ENSFDAG00000017040	R3HDM4	99	86.066	Fukomys_damarensis
ENSMOCG00000002646	R3hdm4	89	55.932	ENSFHEG00000017636	r3hdm4	91	54.468	Fundulus_heteroclitus
ENSMOCG00000002646	R3hdm4	89	52.361	ENSGMOG00000001231	r3hdm4	95	52.564	Gadus_morhua
ENSMOCG00000002646	R3hdm4	97	63.566	ENSGALG00000001998	R3HDM4	97	63.178	Gallus_gallus
ENSMOCG00000002646	R3hdm4	89	56.356	ENSGAFG00000004173	r3hdm4	91	56.170	Gambusia_affinis
ENSMOCG00000002646	R3hdm4	96	66.537	ENSGAGG00000019698	R3HDM4	97	66.148	Gopherus_agassizii
ENSMOCG00000002646	R3hdm4	99	83.774	ENSGGOG00000008040	R3HDM4	99	87.243	Gorilla_gorilla
ENSMOCG00000002646	R3hdm4	89	55.319	ENSHBUG00000014810	r3hdm4	91	55.745	Haplochromis_burtoni
ENSMOCG00000002646	R3hdm4	95	86.056	ENSHGLG00000016194	R3HDM4	99	82.836	Heterocephalus_glaber_female
ENSMOCG00000002646	R3hdm4	89	55.128	ENSHCOG00000008422	r3hdm4	91	54.894	Hippocampus_comes
ENSMOCG00000002646	R3hdm4	89	54.701	ENSIPUG00000006716	r3hdm4	91	53.617	Ictalurus_punctatus
ENSMOCG00000002646	R3hdm4	92	85.185	ENSSTOG00000023015	R3HDM4	99	86.008	Ictidomys_tridecemlineatus
ENSMOCG00000002646	R3hdm4	100	85.821	ENSJJAG00000012475	R3hdm4	100	85.075	Jaculus_jaculus
ENSMOCG00000002646	R3hdm4	99	52.091	ENSKMAG00000005853	r3hdm4	99	51.331	Kryptolebias_marmoratus
ENSMOCG00000002646	R3hdm4	89	54.274	ENSLBEG00000000730	r3hdm4	91	54.043	Labrus_bergylta
ENSMOCG00000002646	R3hdm4	99	57.795	ENSLACG00000016445	R3HDM4	94	59.350	Latimeria_chalumnae
ENSMOCG00000002646	R3hdm4	94	57.028	ENSLOCG00000002423	r3hdm4	99	54.924	Lepisosteus_oculatus
ENSMOCG00000002646	R3hdm4	97	83.203	ENSLAFG00000017796	R3HDM4	99	82.812	Loxodonta_africana
ENSMOCG00000002646	R3hdm4	100	83.895	ENSMFAG00000044131	R3HDM4	99	83.521	Macaca_fascicularis
ENSMOCG00000002646	R3hdm4	100	78.788	ENSMMUG00000009682	R3HDM4	99	78.409	Macaca_mulatta
ENSMOCG00000002646	R3hdm4	92	87.654	ENSMNEG00000044115	R3HDM4	98	87.243	Macaca_nemestrina
ENSMOCG00000002646	R3hdm4	92	85.306	ENSMLEG00000035693	R3HDM4	90	85.714	Mandrillus_leucophaeus
ENSMOCG00000002646	R3hdm4	77	56.863	ENSMAMG00000005652	r3hdm4	82	56.863	Mastacembelus_armatus
ENSMOCG00000002646	R3hdm4	100	92.830	ENSMAUG00000010611	R3hdm4	100	93.585	Mesocricetus_auratus
ENSMOCG00000002646	R3hdm4	100	84.015	ENSMICG00000010124	R3HDM4	99	83.643	Microcebus_murinus
ENSMOCG00000002646	R3hdm4	89	54.043	ENSMMOG00000008253	r3hdm4	91	53.617	Mola_mola
ENSMOCG00000002646	R3hdm4	87	65.368	ENSMODG00000005698	R3HDM4	99	64.935	Monodelphis_domestica
ENSMOCG00000002646	R3hdm4	89	54.894	ENSMALG00000018856	r3hdm4	90	54.894	Monopterus_albus
ENSMOCG00000002646	R3hdm4	100	91.255	MGP_CAROLIEiJ_G0015551	R3hdm4	100	91.255	Mus_caroli
ENSMOCG00000002646	R3hdm4	100	91.635	ENSMUSG00000035781	R3hdm4	100	91.635	Mus_musculus
ENSMOCG00000002646	R3hdm4	100	90.494	MGP_PahariEiJ_G0030964	R3hdm4	100	90.494	Mus_pahari
ENSMOCG00000002646	R3hdm4	100	91.255	MGP_SPRETEiJ_G0016369	-	84	91.255	Mus_spretus
ENSMOCG00000002646	R3hdm4	92	85.597	ENSMPUG00000009394	R3HDM4	90	85.185	Mustela_putorius_furo
ENSMOCG00000002646	R3hdm4	89	54.894	ENSNBRG00000004438	r3hdm4	91	55.319	Neolamprologus_brichardi
ENSMOCG00000002646	R3hdm4	86	86.147	ENSNLEG00000001022	R3HDM4	100	83.983	Nomascus_leucogenys
ENSMOCG00000002646	R3hdm4	92	63.673	ENSMEUG00000011020	R3HDM4	99	62.449	Notamacropus_eugenii
ENSMOCG00000002646	R3hdm4	100	83.955	ENSODEG00000011745	R3HDM4	99	83.582	Octodon_degus
ENSMOCG00000002646	R3hdm4	89	55.319	ENSONIG00000012675	r3hdm4	84	55.745	Oreochromis_niloticus
ENSMOCG00000002646	R3hdm4	89	55.085	ENSOMEG00000003005	r3hdm4	91	53.617	Oryzias_melastigma
ENSMOCG00000002646	R3hdm4	99	82.890	ENSOGAG00000025656	R3HDM4	99	82.890	Otolemur_garnettii
ENSMOCG00000002646	R3hdm4	92	88.066	ENSOARG00000009945	R3HDM4	99	87.654	Ovis_aries
ENSMOCG00000002646	R3hdm4	99	84.151	ENSPPAG00000042371	R3HDM4	99	87.654	Pan_paniscus
ENSMOCG00000002646	R3hdm4	100	83.895	ENSPANG00000015203	R3HDM4	99	83.521	Papio_anubis
ENSMOCG00000002646	R3hdm4	86	56.332	ENSPKIG00000007421	r3hdm4	88	54.113	Paramormyrops_kingsleyae
ENSMOCG00000002646	R3hdm4	89	52.564	ENSPMGG00000020467	r3hdm4	90	52.340	Periophthalmus_magnuspinnatus
ENSMOCG00000002646	R3hdm4	92	96.281	ENSPEMG00000008365	Tmem259	100	96.281	Peromyscus_maniculatus_bairdii
ENSMOCG00000002646	R3hdm4	89	55.932	ENSPFOG00000003199	r3hdm4	91	54.894	Poecilia_formosa
ENSMOCG00000002646	R3hdm4	89	55.932	ENSPMEG00000014183	r3hdm4	91	54.894	Poecilia_mexicana
ENSMOCG00000002646	R3hdm4	89	56.356	ENSPREG00000010709	r3hdm4	91	55.319	Poecilia_reticulata
ENSMOCG00000002646	R3hdm4	100	82.397	ENSPPYG00000009297	R3HDM4	99	82.022	Pongo_abelii
ENSMOCG00000002646	R3hdm4	58	85.430	ENSPCAG00000010997	R3HDM4	55	82.119	Procavia_capensis
ENSMOCG00000002646	R3hdm4	100	83.643	ENSPCOG00000016785	R3HDM4	99	83.271	Propithecus_coquereli
ENSMOCG00000002646	R3hdm4	89	55.319	ENSPNYG00000017489	r3hdm4	91	55.745	Pundamilia_nyererei
ENSMOCG00000002646	R3hdm4	100	92.776	ENSRNOG00000011489	R3hdm4	100	92.776	Rattus_norvegicus
ENSMOCG00000002646	R3hdm4	92	88.477	ENSRROG00000028842	R3HDM4	91	88.066	Rhinopithecus_roxellana
ENSMOCG00000002646	R3hdm4	94	83.730	ENSSBOG00000019298	R3HDM4	74	83.730	Saimiri_boliviensis_boliviensis
ENSMOCG00000002646	R3hdm4	55	69.444	ENSSHAG00000003036	-	99	68.276	Sarcophilus_harrisii
ENSMOCG00000002646	R3hdm4	89	54.468	ENSSFOG00015020574	r3hdm4	86	53.191	Scleropages_formosus
ENSMOCG00000002646	R3hdm4	89	55.319	ENSSMAG00000021090	r3hdm4	67	55.319	Scophthalmus_maximus
ENSMOCG00000002646	R3hdm4	89	56.596	ENSSDUG00000008488	r3hdm4	91	56.170	Seriola_dumerili
ENSMOCG00000002646	R3hdm4	89	56.596	ENSSLDG00000025328	r3hdm4	91	56.170	Seriola_lalandi_dorsalis
ENSMOCG00000002646	R3hdm4	90	68.067	ENSSPUG00000005434	R3HDM4	93	67.647	Sphenodon_punctatus
ENSMOCG00000002646	R3hdm4	89	53.846	ENSSPAG00000002562	r3hdm4	90	53.419	Stegastes_partitus
ENSMOCG00000002646	R3hdm4	100	82.657	ENSSSCG00000013419	R3HDM4	99	82.288	Sus_scrofa
ENSMOCG00000002646	R3hdm4	78	64.593	ENSTGUG00000000663	R3HDM4	100	63.158	Taeniopygia_guttata
ENSMOCG00000002646	R3hdm4	92	83.058	ENSTTRG00000001470	R3HDM4	99	82.231	Tursiops_truncatus
ENSMOCG00000002646	R3hdm4	100	72.285	ENSUAMG00000005751	R3HDM4	99	86.486	Ursus_americanus
ENSMOCG00000002646	R3hdm4	100	82.657	ENSVVUG00000022685	R3HDM4	99	82.288	Vulpes_vulpes
ENSMOCG00000002646	R3hdm4	89	47.257	ENSXETG00000033624	R3HDM4	91	47.009	Xenopus_tropicalis
ENSMOCG00000002646	R3hdm4	89	56.118	ENSXCOG00000005127	r3hdm4	91	55.085	Xiphophorus_couchianus
ENSMOCG00000002646	R3hdm4	89	56.356	ENSXMAG00000022875	r3hdm4	91	55.319	Xiphophorus_maculatus