EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000002892 (Gene tree)
Gene ID: 101998359
Gene Symbol: -
Alias: -
Full Name: small nuclear ribonucleoprotein polypeptides B and B1
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 8101 bases
Position: chrJH996433.1:17600154-17608254
Accession: 101998359
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000003624	LSM	PF01423.22	6.5e-20	1	1
ENSMOCP00000003625	LSM	PF01423.22	7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000003892	-	738	-	ENSMOCP00000003625	245 (aa)	-	-
ENSMOCT00000003891	-	1143	XM_005365629	ENSMOCP00000003624	231 (aa)	XP_005365686	UPI00038C4421

Gene Model

Click here to download ENSMOCG00000002892's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000002892's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000002892	-	96	93.213	ENSMOCG00000015350	Snrpn	92	93.213
ENSMOCG00000002892	-	72	70.659	ENSMOCG00000021362	-	72	73.988

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000002892	-	100	99.567	ENSG00000125835	SNRPB	100	99.567	Homo_sapiens
ENSMOCG00000002892	-	78	92.265	ENSAPOG00000019606	snrpb	56	94.048	Acanthochromis_polyacanthus
ENSMOCG00000002892	-	99	99.561	ENSAMEG00000011353	SNRPB	94	99.561	Ailuropoda_melanoleuca
ENSMOCG00000002892	-	76	92.000	ENSACIG00000014480	snrpb	71	93.827	Amphilophus_citrinellus
ENSMOCG00000002892	-	78	92.265	ENSAOCG00000006876	snrpb	69	94.048	Amphiprion_ocellaris
ENSMOCG00000002892	-	78	92.265	ENSAPEG00000021585	snrpb	71	94.048	Amphiprion_percula
ENSMOCG00000002892	-	78	91.713	ENSATEG00000009836	snrpb	69	93.452	Anabas_testudineus
ENSMOCG00000002892	-	92	94.836	ENSACAG00000002053	SNRPB	92	94.836	Anolis_carolinensis
ENSMOCG00000002892	-	99	92.609	ENSANAG00000036271	-	76	92.593	Aotus_nancymaae
ENSMOCG00000002892	-	100	99.567	ENSANAG00000024443	-	100	99.567	Aotus_nancymaae
ENSMOCG00000002892	-	78	92.265	ENSACLG00000014707	snrpb	69	94.048	Astatotilapia_calliptera
ENSMOCG00000002892	-	73	92.262	ENSAMXG00000029434	snrpb	70	93.452	Astyanax_mexicanus
ENSMOCG00000002892	-	100	99.134	ENSBTAG00000001038	SNRPB	100	99.134	Bos_taurus
ENSMOCG00000002892	-	100	99.567	ENSCJAG00000020971	-	100	99.567	Callithrix_jacchus
ENSMOCG00000002892	-	93	91.589	ENSCJAG00000023097	-	79	91.534	Callithrix_jacchus
ENSMOCG00000002892	-	100	99.567	ENSCAFG00000006693	-	100	99.567	Canis_familiaris
ENSMOCG00000002892	-	81	87.895	ENSCAFG00000031109	-	79	84.211	Canis_familiaris
ENSMOCG00000002892	-	99	99.563	ENSCAFG00020016981	-	95	99.563	Canis_lupus_dingo
ENSMOCG00000002892	-	100	99.134	ENSCHIG00000025449	-	100	99.134	Capra_hircus
ENSMOCG00000002892	-	97	76.889	ENSTSYG00000032303	-	55	80.405	Carlito_syrichta
ENSMOCG00000002892	-	100	99.567	ENSTSYG00000014498	-	100	99.567	Carlito_syrichta
ENSMOCG00000002892	-	99	99.565	ENSCAPG00000012669	SNRPB	100	99.565	Cavia_aperea
ENSMOCG00000002892	-	100	99.567	ENSCPOG00000039408	SNRPB	100	99.567	Cavia_porcellus
ENSMOCG00000002892	-	55	87.402	ENSCCAG00000035140	-	89	86.275	Cebus_capucinus
ENSMOCG00000002892	-	100	99.567	ENSCCAG00000026002	SNRPB	100	99.567	Cebus_capucinus
ENSMOCG00000002892	-	100	99.567	ENSCATG00000030230	SNRPB	100	99.567	Cercocebus_atys
ENSMOCG00000002892	-	98	99.558	ENSCLAG00000012442	SNRPB	95	99.558	Chinchilla_lanigera
ENSMOCG00000002892	-	100	99.567	ENSCSAG00000010840	SNRPB	100	99.567	Chlorocebus_sabaeus
ENSMOCG00000002892	-	99	96.070	ENSCPBG00000026801	SNRPB	100	95.652	Chrysemys_picta_bellii
ENSMOCG00000002892	-	100	99.567	ENSCANG00000019461	SNRPB	100	99.567	Colobus_angolensis_palliatus
ENSMOCG00000002892	-	100	99.567	ENSCGRG00001023046	Snrpb	100	99.567	Cricetulus_griseus_chok1gshd
ENSMOCG00000002892	-	96	99.548	ENSCGRG00000010423	Snrpb	99	98.661	Cricetulus_griseus_crigri
ENSMOCG00000002892	-	79	92.350	ENSCSEG00000020328	snrpb	70	94.048	Cynoglossus_semilaevis
ENSMOCG00000002892	-	73	92.857	ENSDARG00000011125	snrpb	69	94.048	Danio_rerio
ENSMOCG00000002892	-	75	93.642	ENSDNOG00000007896	-	71	93.642	Dasypus_novemcinctus
ENSMOCG00000002892	-	99	99.563	ENSDNOG00000015545	-	95	99.563	Dasypus_novemcinctus
ENSMOCG00000002892	-	97	99.103	ENSDORG00000029558	Snrpb	97	99.103	Dipodomys_ordii
ENSMOCG00000002892	-	65	69.799	FBgn0262601	SmB	74	69.799	Drosophila_melanogaster
ENSMOCG00000002892	-	79	78.142	ENSETEG00000006830	SNRPB	74	76.786	Echinops_telfairi
ENSMOCG00000002892	-	78	79.570	ENSEBUG00000007467	SNRPB	62	87.919	Eptatretus_burgeri
ENSMOCG00000002892	-	100	99.134	ENSEASG00005012991	SNRPB	100	99.134	Equus_asinus_asinus
ENSMOCG00000002892	-	100	99.567	ENSECAG00000011944	SNRPB	100	99.567	Equus_caballus
ENSMOCG00000002892	-	98	99.558	ENSEEUG00000015568	SNRPB	80	99.558	Erinaceus_europaeus
ENSMOCG00000002892	-	63	95.172	ENSELUG00000014564	snrpb	71	92.593	Esox_lucius
ENSMOCG00000002892	-	100	99.567	ENSFCAG00000034090	-	100	99.567	Felis_catus
ENSMOCG00000002892	-	74	95.349	ENSFALG00000004866	SNRPB	92	95.305	Ficedula_albicollis
ENSMOCG00000002892	-	100	99.567	ENSFDAG00000009937	SNRPB	100	99.567	Fukomys_damarensis
ENSMOCG00000002892	-	78	95.556	ENSGALG00000035421	SNRPN	92	95.475	Gallus_gallus
ENSMOCG00000002892	-	74	92.442	ENSGAFG00000019558	snrpb	72	93.413	Gambusia_affinis
ENSMOCG00000002892	-	79	90.710	ENSGACG00000003262	snrpb	70	94.048	Gasterosteus_aculeatus
ENSMOCG00000002892	-	99	96.070	ENSGAGG00000001308	SNRPB	95	96.070	Gopherus_agassizii
ENSMOCG00000002892	-	100	99.567	ENSGGOG00000016138	SNRPB	100	99.567	Gorilla_gorilla
ENSMOCG00000002892	-	78	92.265	ENSHBUG00000008369	snrpb	69	94.048	Haplochromis_burtoni
ENSMOCG00000002892	-	65	90.000	ENSHGLG00000016505	-	72	90.000	Heterocephalus_glaber_female
ENSMOCG00000002892	-	100	99.567	ENSHGLG00000016241	-	100	99.567	Heterocephalus_glaber_female
ENSMOCG00000002892	-	65	90.000	ENSHGLG00100004178	-	72	90.000	Heterocephalus_glaber_male
ENSMOCG00000002892	-	100	99.567	ENSHGLG00100012877	-	100	99.567	Heterocephalus_glaber_male
ENSMOCG00000002892	-	79	92.350	ENSHCOG00000014888	snrpb	70	94.048	Hippocampus_comes
ENSMOCG00000002892	-	73	92.857	ENSIPUG00000024569	SNRPB	70	94.048	Ictalurus_punctatus
ENSMOCG00000002892	-	99	97.817	ENSSTOG00000033664	-	95	97.817	Ictidomys_tridecemlineatus
ENSMOCG00000002892	-	94	81.481	ENSSTOG00000027821	-	62	98.529	Ictidomys_tridecemlineatus
ENSMOCG00000002892	-	100	99.567	ENSJJAG00000024170	Snrpb	100	99.567	Jaculus_jaculus
ENSMOCG00000002892	-	75	93.642	ENSKMAG00000014494	snrpb	68	94.643	Kryptolebias_marmoratus
ENSMOCG00000002892	-	79	92.350	ENSLBEG00000005678	snrpb	70	94.048	Labrus_bergylta
ENSMOCG00000002892	-	96	92.760	ENSLACG00000011459	SNRPB	92	92.760	Latimeria_chalumnae
ENSMOCG00000002892	-	73	93.452	ENSLOCG00000002687	snrpb	70	94.643	Lepisosteus_oculatus
ENSMOCG00000002892	-	99	95.614	ENSLAFG00000017588	SNRPB	99	95.614	Loxodonta_africana
ENSMOCG00000002892	-	100	99.567	ENSMFAG00000038756	SNRPB	100	99.567	Macaca_fascicularis
ENSMOCG00000002892	-	100	99.567	ENSMMUG00000010050	SNRPB	100	99.567	Macaca_mulatta
ENSMOCG00000002892	-	100	99.567	ENSMNEG00000027954	SNRPB	100	99.567	Macaca_nemestrina
ENSMOCG00000002892	-	100	99.567	ENSMLEG00000022346	SNRPB	100	99.567	Mandrillus_leucophaeus
ENSMOCG00000002892	-	78	92.222	ENSMAMG00000009294	snrpb	67	94.012	Mastacembelus_armatus
ENSMOCG00000002892	-	78	92.265	ENSMZEG00005011856	snrpb	69	94.048	Maylandia_zebra
ENSMOCG00000002892	-	100	99.134	ENSMICG00000016519	SNRPB	100	99.134	Microcebus_murinus
ENSMOCG00000002892	-	97	84.889	ENSMICG00000015983	-	87	89.418	Microcebus_murinus
ENSMOCG00000002892	-	79	92.308	ENSMMOG00000013226	snrpb	71	94.012	Mola_mola
ENSMOCG00000002892	-	78	91.713	ENSMALG00000020839	snrpb	56	93.452	Monopterus_albus
ENSMOCG00000002892	-	100	99.134	MGP_CAROLIEiJ_G0024293	Snrpb	100	99.134	Mus_caroli
ENSMOCG00000002892	-	100	99.134	ENSMUSG00000027404	Snrpb	100	99.134	Mus_musculus
ENSMOCG00000002892	-	100	99.134	MGP_PahariEiJ_G0025738	Snrpb	100	99.134	Mus_pahari
ENSMOCG00000002892	-	100	99.134	MGP_SPRETEiJ_G0025213	Snrpb	100	99.134	Mus_spretus
ENSMOCG00000002892	-	100	99.567	ENSMPUG00000009283	SNRPB	100	99.567	Mustela_putorius_furo
ENSMOCG00000002892	-	99	96.507	ENSMLUG00000016951	SNRPB	95	96.507	Myotis_lucifugus
ENSMOCG00000002892	-	100	99.567	ENSNGAG00000012051	Snrpb	100	99.567	Nannospalax_galili
ENSMOCG00000002892	-	78	89.503	ENSNBRG00000006353	snrpb	62	92.683	Neolamprologus_brichardi
ENSMOCG00000002892	-	99	99.563	ENSNLEG00000029067	SNRPB	97	98.701	Nomascus_leucogenys
ENSMOCG00000002892	-	97	96.889	ENSMEUG00000015625	SNRPB	100	96.889	Notamacropus_eugenii
ENSMOCG00000002892	-	98	96.018	ENSODEG00000016060	-	95	96.018	Octodon_degus
ENSMOCG00000002892	-	100	99.567	ENSODEG00000004305	-	100	99.567	Octodon_degus
ENSMOCG00000002892	-	78	92.265	ENSONIG00000000248	snrpb	69	94.048	Oreochromis_niloticus
ENSMOCG00000002892	-	93	94.419	ENSOCUG00000021456	-	78	95.238	Oryctolagus_cuniculus
ENSMOCG00000002892	-	99	96.507	ENSOCUG00000028215	-	95	96.507	Oryctolagus_cuniculus
ENSMOCG00000002892	-	77	92.737	ENSOCUG00000022423	-	86	95.833	Oryctolagus_cuniculus
ENSMOCG00000002892	-	99	99.127	ENSOCUG00000014042	-	95	99.127	Oryctolagus_cuniculus
ENSMOCG00000002892	-	91	72.038	ENSOCUG00000026813	-	63	70.270	Oryctolagus_cuniculus
ENSMOCG00000002892	-	78	91.713	ENSORLG00000021862	snrpb	69	94.048	Oryzias_latipes
ENSMOCG00000002892	-	99	99.563	ENSOGAG00000016149	SNRPB	95	99.563	Otolemur_garnettii
ENSMOCG00000002892	-	100	99.134	ENSOARG00000006740	SNRPB	100	99.134	Ovis_aries
ENSMOCG00000002892	-	100	99.567	ENSPPAG00000036314	SNRPB	100	99.567	Pan_paniscus
ENSMOCG00000002892	-	100	99.567	ENSPPRG00000003233	-	100	99.567	Panthera_pardus
ENSMOCG00000002892	-	99	99.565	ENSPTIG00000007468	SNRPB	99	99.565	Panthera_tigris_altaica
ENSMOCG00000002892	-	100	99.567	ENSPTRG00000013176	SNRPB	100	99.567	Pan_troglodytes
ENSMOCG00000002892	-	99	99.565	ENSPANG00000020362	SNRPB	95	99.563	Papio_anubis
ENSMOCG00000002892	-	73	92.262	ENSPKIG00000002865	snrpb	70	93.452	Paramormyrops_kingsleyae
ENSMOCG00000002892	-	99	96.053	ENSPSIG00000014125	SNRPB	94	96.053	Pelodiscus_sinensis
ENSMOCG00000002892	-	77	90.449	ENSPMGG00000016349	snrpb	69	92.025	Periophthalmus_magnuspinnatus
ENSMOCG00000002892	-	100	99.567	ENSPEMG00000007948	Snrpb	100	99.567	Peromyscus_maniculatus_bairdii
ENSMOCG00000002892	-	99	97.368	ENSPCIG00000004694	SNRPB	95	97.368	Phascolarctos_cinereus
ENSMOCG00000002892	-	82	76.316	ENSPREG00000015515	snrpb	62	94.815	Poecilia_reticulata
ENSMOCG00000002892	-	100	99.567	ENSPPYG00000010841	SNRPB	100	99.567	Pongo_abelii
ENSMOCG00000002892	-	100	99.567	ENSPCOG00000013686	SNRPB	100	99.567	Propithecus_coquereli
ENSMOCG00000002892	-	98	98.238	ENSPVAG00000017013	SNRPB	86	92.623	Pteropus_vampyrus
ENSMOCG00000002892	-	78	92.265	ENSPNYG00000014788	snrpb	69	94.048	Pundamilia_nyererei
ENSMOCG00000002892	-	77	92.655	ENSPNAG00000016126	snrpb	70	94.048	Pygocentrus_nattereri
ENSMOCG00000002892	-	100	99.567	ENSRNOG00000006961	Snrpb	100	99.567	Rattus_norvegicus
ENSMOCG00000002892	-	100	99.134	ENSRBIG00000040505	SNRPB	100	99.134	Rhinopithecus_bieti
ENSMOCG00000002892	-	100	99.567	ENSRROG00000036094	SNRPB	100	99.567	Rhinopithecus_roxellana
ENSMOCG00000002892	-	100	99.567	ENSSBOG00000027310	SNRPB	100	99.567	Saimiri_boliviensis_boliviensis
ENSMOCG00000002892	-	99	97.817	ENSSHAG00000010394	SNRPB	95	97.817	Sarcophilus_harrisii
ENSMOCG00000002892	-	73	91.667	ENSSFOG00015002870	snrpb	70	92.857	Scleropages_formosus
ENSMOCG00000002892	-	79	91.803	ENSSMAG00000006766	snrpb	70	93.452	Scophthalmus_maximus
ENSMOCG00000002892	-	78	92.265	ENSSDUG00000018539	snrpb	69	94.048	Seriola_dumerili
ENSMOCG00000002892	-	78	92.265	ENSSLDG00000022391	snrpb	69	94.048	Seriola_lalandi_dorsalis
ENSMOCG00000002892	-	74	84.302	ENSSARG00000003084	SNRPB	74	84.302	Sorex_araneus
ENSMOCG00000002892	-	99	96.053	ENSSPUG00000015659	SNRPB	95	96.053	Sphenodon_punctatus
ENSMOCG00000002892	-	78	92.265	ENSSPAG00000021992	snrpb	69	94.048	Stegastes_partitus
ENSMOCG00000002892	-	100	80.087	ENSSSCG00000011966	-	91	75.943	Sus_scrofa
ENSMOCG00000002892	-	100	99.134	ENSSSCG00000040857	-	100	99.134	Sus_scrofa
ENSMOCG00000002892	-	77	79.096	ENSTGUG00000005684	SNRPB	59	95.714	Taeniopygia_guttata
ENSMOCG00000002892	-	79	91.257	ENSTRUG00000023094	snrpb	72	93.452	Takifugu_rubripes
ENSMOCG00000002892	-	79	91.257	ENSTNIG00000002991	snrpb	70	93.452	Tetraodon_nigroviridis
ENSMOCG00000002892	-	75	99.422	ENSUAMG00000005984	-	83	99.422	Ursus_americanus
ENSMOCG00000002892	-	59	98.540	ENSUMAG00000002123	-	63	98.540	Ursus_maritimus
ENSMOCG00000002892	-	99	99.127	ENSVVUG00000025654	-	95	99.127	Vulpes_vulpes
ENSMOCG00000002892	-	97	79.295	ENSVVUG00000010086	-	85	80.612	Vulpes_vulpes
ENSMOCG00000002892	-	82	95.238	ENSXETG00000027266	snrpb	72	94.706	Xenopus_tropicalis
ENSMOCG00000002892	-	74	78.363	ENSXMAG00000028767	snrpb	58	94.815	Xiphophorus_maculatus