EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000003396 (Gene tree)
Gene ID: 101996099
Gene Symbol: Poc1a
Alias: 2510040D07Rik|Wdr51a|cha
Full Name: POC1 centriolar protein A
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 49379 bases
Position: chrJH996463.1:3109376-3158754
Accession: 101996099
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000004205	eIF2A	PF08662.11	7e-11	1	1
ENSMOCP00000004206	eIF2A	PF08662.11	8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000004570	-	1498	XM_005368501	ENSMOCP00000004205	372 (aa)	XP_005368558	-
ENSMOCT00000004572	-	1152	-	ENSMOCP00000004206	383 (aa)	-	-

Gene Model

Click here to download ENSMOCG00000003396's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000003396's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000003396	Poc1a	54	30.332	ENSMOCG00000016916	Pex7	66	30.332
ENSMOCG00000003396	Poc1a	65	37.037	ENSMOCG00000011609	Dcaf13	67	37.037
ENSMOCG00000003396	Poc1a	78	30.000	ENSMOCG00000018273	Prpf4	56	30.000
ENSMOCG00000003396	Poc1a	98	64.865	ENSMOCG00000015822	Poc1b	92	53.623
ENSMOCG00000003396	Poc1a	78	32.941	ENSMOCG00000003274	Wdr61	97	31.746
ENSMOCG00000003396	Poc1a	91	32.099	ENSMOCG00000014361	Wdr3	60	32.099
ENSMOCG00000003396	Poc1a	77	30.037	ENSMOCG00000010383	Prpf19	56	30.037
ENSMOCG00000003396	Poc1a	80	35.354	ENSMOCG00000009518	Ciao1	90	35.354

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000003396	Poc1a	100	93.067	ENSG00000164087	POC1A	91	94.495	Homo_sapiens
ENSMOCG00000003396	Poc1a	96	75.166	ENSAPOG00000002677	POC1A	91	68.478	Acanthochromis_polyacanthus
ENSMOCG00000003396	Poc1a	100	92.267	ENSAMEG00000009136	POC1A	91	92.742	Ailuropoda_melanoleuca
ENSMOCG00000003396	Poc1a	85	73.313	ENSACIG00000018288	poc1a	75	72.948	Amphilophus_citrinellus
ENSMOCG00000003396	Poc1a	99	70.745	ENSAOCG00000001066	POC1A	92	70.449	Amphiprion_ocellaris
ENSMOCG00000003396	Poc1a	81	79.139	ENSAPEG00000005795	poc1a	88	79.139	Amphiprion_percula
ENSMOCG00000003396	Poc1a	98	78.226	ENSAPLG00000007756	POC1A	93	77.867	Anas_platyrhynchos
ENSMOCG00000003396	Poc1a	100	91.733	ENSANAG00000030897	POC1A	92	91.733	Aotus_nancymaae
ENSMOCG00000003396	Poc1a	85	75.153	ENSACLG00000017869	POC1A	87	74.772	Astatotilapia_calliptera
ENSMOCG00000003396	Poc1a	85	76.115	ENSAMXG00000024703	poc1a	89	76.115	Astyanax_mexicanus
ENSMOCG00000003396	Poc1a	97	91.496	ENSBTAG00000001471	POC1A	92	90.882	Bos_taurus
ENSMOCG00000003396	Poc1a	100	91.733	ENSCJAG00000005972	POC1A	91	93.272	Callithrix_jacchus
ENSMOCG00000003396	Poc1a	100	85.294	ENSCAFG00020022379	POC1A	92	85.294	Canis_lupus_dingo
ENSMOCG00000003396	Poc1a	100	91.733	ENSCHIG00000002571	POC1A	92	91.957	Capra_hircus
ENSMOCG00000003396	Poc1a	100	92.800	ENSTSYG00000008302	POC1A	91	94.801	Carlito_syrichta
ENSMOCG00000003396	Poc1a	98	81.967	ENSCAPG00000016201	POC1A	91	81.501	Cavia_aperea
ENSMOCG00000003396	Poc1a	100	90.400	ENSCPOG00000006740	POC1A	92	90.400	Cavia_porcellus
ENSMOCG00000003396	Poc1a	100	92.533	ENSCCAG00000023380	POC1A	92	92.533	Cebus_capucinus
ENSMOCG00000003396	Poc1a	100	92.533	ENSCATG00000021822	POC1A	92	92.533	Cercocebus_atys
ENSMOCG00000003396	Poc1a	100	85.867	ENSCLAG00000010593	POC1A	92	85.867	Chinchilla_lanigera
ENSMOCG00000003396	Poc1a	97	92.878	ENSCSAG00000013862	POC1A	92	92.353	Chlorocebus_sabaeus
ENSMOCG00000003396	Poc1a	75	87.454	ENSCPBG00000016728	POC1A	98	87.454	Chrysemys_picta_bellii
ENSMOCG00000003396	Poc1a	96	64.286	ENSCSAVG00000008477	-	97	64.798	Ciona_savignyi
ENSMOCG00000003396	Poc1a	96	92.878	ENSCANG00000033064	POC1A	91	93.884	Colobus_angolensis_palliatus
ENSMOCG00000003396	Poc1a	100	94.638	ENSCGRG00001007357	Poc1a	92	94.638	Cricetulus_griseus_chok1gshd
ENSMOCG00000003396	Poc1a	98	66.940	ENSCSEG00000010287	POC1A	88	66.667	Cynoglossus_semilaevis
ENSMOCG00000003396	Poc1a	98	67.196	ENSCVAG00000015594	POC1A	90	66.929	Cyprinodon_variegatus
ENSMOCG00000003396	Poc1a	98	54.358	ENSEBUG00000002614	POC1A	88	54.358	Eptatretus_burgeri
ENSMOCG00000003396	Poc1a	78	61.246	ENSEBUG00000008013	poc1a	83	61.246	Eptatretus_burgeri
ENSMOCG00000003396	Poc1a	72	58.621	ENSEBUG00000008246	POC1A	55	57.823	Eptatretus_burgeri
ENSMOCG00000003396	Poc1a	84	77.955	ENSELUG00000015504	poc1a	93	67.663	Esox_lucius
ENSMOCG00000003396	Poc1a	100	93.333	ENSFCAG00000015704	POC1A	91	94.801	Felis_catus
ENSMOCG00000003396	Poc1a	100	74.339	ENSFALG00000008922	POC1A	92	74.339	Ficedula_albicollis
ENSMOCG00000003396	Poc1a	100	91.467	ENSFDAG00000011606	POC1A	92	91.979	Fukomys_damarensis
ENSMOCG00000003396	Poc1a	98	60.606	ENSFHEG00000015504	POC1A	77	77.431	Fundulus_heteroclitus
ENSMOCG00000003396	Poc1a	100	74.734	ENSGALG00000034572	-	100	74.734	Gallus_gallus
ENSMOCG00000003396	Poc1a	98	69.973	ENSGACG00000007015	poc1a	91	69.393	Gasterosteus_aculeatus
ENSMOCG00000003396	Poc1a	100	78.307	ENSGAGG00000014637	POC1A	92	78.307	Gopherus_agassizii
ENSMOCG00000003396	Poc1a	100	92.800	ENSGGOG00000006652	POC1A	91	94.190	Gorilla_gorilla
ENSMOCG00000003396	Poc1a	100	92.267	ENSHGLG00000013436	POC1A	92	92.267	Heterocephalus_glaber_female
ENSMOCG00000003396	Poc1a	100	92.267	ENSHGLG00100003479	POC1A	92	92.954	Heterocephalus_glaber_male
ENSMOCG00000003396	Poc1a	98	68.579	ENSIPUG00000001227	POC1A	90	66.923	Ictalurus_punctatus
ENSMOCG00000003396	Poc1a	100	93.067	ENSSTOG00000002638	POC1A	91	94.495	Ictidomys_tridecemlineatus
ENSMOCG00000003396	Poc1a	100	92.267	ENSJJAG00000018739	Poc1a	99	87.222	Jaculus_jaculus
ENSMOCG00000003396	Poc1a	80	77.365	ENSLBEG00000016119	POC1A	93	60.508	Labrus_bergylta
ENSMOCG00000003396	Poc1a	100	68.317	ENSLACG00000018788	POC1A	89	79.870	Latimeria_chalumnae
ENSMOCG00000003396	Poc1a	99	72.823	ENSLOCG00000013801	poc1a	90	72.823	Lepisosteus_oculatus
ENSMOCG00000003396	Poc1a	98	82.114	ENSLAFG00000028434	POC1A	99	88.255	Loxodonta_africana
ENSMOCG00000003396	Poc1a	90	92.582	ENSMFAG00000001970	POC1A	92	92.059	Macaca_fascicularis
ENSMOCG00000003396	Poc1a	100	92.533	ENSMMUG00000012485	POC1A	92	92.533	Macaca_mulatta
ENSMOCG00000003396	Poc1a	90	92.285	ENSMNEG00000042811	POC1A	92	91.765	Macaca_nemestrina
ENSMOCG00000003396	Poc1a	90	92.582	ENSMLEG00000039574	POC1A	91	93.578	Mandrillus_leucophaeus
ENSMOCG00000003396	Poc1a	97	60.591	ENSMAMG00000014233	POC1A	92	60.591	Mastacembelus_armatus
ENSMOCG00000003396	Poc1a	85	75.153	ENSMZEG00005013503	POC1A	70	74.772	Maylandia_zebra
ENSMOCG00000003396	Poc1a	99	67.866	ENSMGAG00000001628	POC1A	93	67.866	Meleagris_gallopavo
ENSMOCG00000003396	Poc1a	100	97.051	ENSMAUG00000017403	Poc1a	92	97.051	Mesocricetus_auratus
ENSMOCG00000003396	Poc1a	100	93.850	ENSMICG00000002709	POC1A	91	95.399	Microcebus_murinus
ENSMOCG00000003396	Poc1a	99	65.405	ENSMMOG00000010427	poc1a	88	65.323	Mola_mola
ENSMOCG00000003396	Poc1a	98	79.946	ENSMODG00000011717	POC1A	96	79.946	Monodelphis_domestica
ENSMOCG00000003396	Poc1a	87	73.112	ENSMALG00000009054	poc1a	90	72.404	Monopterus_albus
ENSMOCG00000003396	Poc1a	100	94.370	MGP_CAROLIEiJ_G0032617	Poc1a	91	95.692	Mus_caroli
ENSMOCG00000003396	Poc1a	100	94.102	ENSMUSG00000023345	Poc1a	97	94.828	Mus_musculus
ENSMOCG00000003396	Poc1a	100	94.638	MGP_PahariEiJ_G0015485	Poc1a	92	94.638	Mus_pahari
ENSMOCG00000003396	Poc1a	100	93.834	MGP_SPRETEiJ_G0033763	Poc1a	91	95.077	Mus_spretus
ENSMOCG00000003396	Poc1a	100	92.533	ENSMPUG00000011723	POC1A	92	92.533	Mustela_putorius_furo
ENSMOCG00000003396	Poc1a	99	91.176	ENSMLUG00000015092	POC1A	85	91.176	Myotis_lucifugus
ENSMOCG00000003396	Poc1a	100	95.722	ENSNGAG00000005212	Poc1a	92	95.722	Nannospalax_galili
ENSMOCG00000003396	Poc1a	84	74.845	ENSNBRG00000022135	poc1a	76	74.845	Neolamprologus_brichardi
ENSMOCG00000003396	Poc1a	90	91.988	ENSNLEG00000007084	POC1A	91	93.578	Nomascus_leucogenys
ENSMOCG00000003396	Poc1a	80	75.510	ENSMEUG00000007715	-	72	75.510	Notamacropus_eugenii
ENSMOCG00000003396	Poc1a	97	89.118	ENSOPRG00000008831	POC1A	84	89.118	Ochotona_princeps
ENSMOCG00000003396	Poc1a	98	91.622	ENSODEG00000018290	POC1A	93	91.153	Octodon_degus
ENSMOCG00000003396	Poc1a	85	73.926	ENSONIG00000014378	POC1A	70	73.556	Oreochromis_niloticus
ENSMOCG00000003396	Poc1a	97	91.395	ENSOCUG00000002080	POC1A	92	90.882	Oryctolagus_cuniculus
ENSMOCG00000003396	Poc1a	95	66.759	ENSOMEG00000019834	POC1A	94	59.765	Oryzias_melastigma
ENSMOCG00000003396	Poc1a	100	93.048	ENSOGAG00000032245	POC1A	93	91.799	Otolemur_garnettii
ENSMOCG00000003396	Poc1a	100	91.733	ENSOARG00000006352	POC1A	92	91.957	Ovis_aries
ENSMOCG00000003396	Poc1a	90	92.878	ENSPPAG00000043583	POC1A	91	94.495	Pan_paniscus
ENSMOCG00000003396	Poc1a	100	93.333	ENSPPRG00000003365	POC1A	91	94.801	Panthera_pardus
ENSMOCG00000003396	Poc1a	97	92.878	ENSPTIG00000005388	POC1A	92	92.353	Panthera_tigris_altaica
ENSMOCG00000003396	Poc1a	90	93.175	ENSPTRG00000014989	POC1A	91	94.495	Pan_troglodytes
ENSMOCG00000003396	Poc1a	83	86.408	ENSPSIG00000014809	POC1A	89	85.623	Pelodiscus_sinensis
ENSMOCG00000003396	Poc1a	98	69.210	ENSPMGG00000005356	poc1a	90	68.919	Periophthalmus_magnuspinnatus
ENSMOCG00000003396	Poc1a	98	96.458	ENSPEMG00000024131	Poc1a	100	96.923	Peromyscus_maniculatus_bairdii
ENSMOCG00000003396	Poc1a	99	62.356	ENSPMAG00000000333	poc1a	94	62.243	Petromyzon_marinus
ENSMOCG00000003396	Poc1a	100	78.552	ENSPCIG00000018160	POC1A	99	78.552	Phascolarctos_cinereus
ENSMOCG00000003396	Poc1a	100	92.800	ENSPPYG00000013816	POC1A	92	92.800	Pongo_abelii
ENSMOCG00000003396	Poc1a	100	87.733	ENSPCAG00000002118	POC1A	92	87.733	Procavia_capensis
ENSMOCG00000003396	Poc1a	97	94.643	ENSPCOG00000012625	POC1A	91	96.319	Propithecus_coquereli
ENSMOCG00000003396	Poc1a	87	81.288	ENSPVAG00000012480	POC1A	80	81.288	Pteropus_vampyrus
ENSMOCG00000003396	Poc1a	98	69.973	ENSPNYG00000019517	poc1a	91	69.393	Pundamilia_nyererei
ENSMOCG00000003396	Poc1a	98	69.949	ENSPNAG00000007556	POC1A	90	69.576	Pygocentrus_nattereri
ENSMOCG00000003396	Poc1a	97	93.731	ENSRNOG00000037295	Poc1a	91	93.731	Rattus_norvegicus
ENSMOCG00000003396	Poc1a	96	92.582	ENSRBIG00000031748	POC1A	91	93.884	Rhinopithecus_bieti
ENSMOCG00000003396	Poc1a	90	92.582	ENSRROG00000044472	POC1A	91	93.884	Rhinopithecus_roxellana
ENSMOCG00000003396	Poc1a	90	92.878	ENSSBOG00000027902	POC1A	92	92.353	Saimiri_boliviensis_boliviensis
ENSMOCG00000003396	Poc1a	96	77.385	ENSSMAG00000013505	POC1A	91	67.454	Scophthalmus_maximus
ENSMOCG00000003396	Poc1a	85	75.000	ENSSDUG00000016161	POC1A	70	75.000	Seriola_dumerili
ENSMOCG00000003396	Poc1a	85	74.695	ENSSLDG00000003828	POC1A	87	77.855	Seriola_lalandi_dorsalis
ENSMOCG00000003396	Poc1a	90	76.375	ENSSPUG00000008656	POC1A	63	82.671	Sphenodon_punctatus
ENSMOCG00000003396	Poc1a	98	57.527	ENSSPAG00000020330	POC1A	87	57.333	Stegastes_partitus
ENSMOCG00000003396	Poc1a	100	92.000	ENSSSCG00000011426	POC1A	92	92.000	Sus_scrofa
ENSMOCG00000003396	Poc1a	98	74.865	ENSTGUG00000006036	POC1A	93	74.531	Taeniopygia_guttata
ENSMOCG00000003396	Poc1a	98	60.241	ENSTRUG00000007900	POC1A	78	72.917	Takifugu_rubripes
ENSMOCG00000003396	Poc1a	86	68.580	ENSTNIG00000014818	POC1A	68	68.580	Tetraodon_nigroviridis
ENSMOCG00000003396	Poc1a	100	88.800	ENSTTRG00000016798	POC1A	92	88.800	Tursiops_truncatus
ENSMOCG00000003396	Poc1a	100	92.000	ENSUAMG00000020816	POC1A	96	94.118	Ursus_americanus
ENSMOCG00000003396	Poc1a	97	92.285	ENSUMAG00000021482	POC1A	92	91.765	Ursus_maritimus
ENSMOCG00000003396	Poc1a	99	65.000	ENSXETG00000010813	poc1a	91	65.000	Xenopus_tropicalis