EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000003447 (Gene tree)
Gene ID: 102002278
Gene Symbol: Thumpd1
Alias: 6330575P11Rik
Full Name: THUMP domain containing 1
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 5767 bases
Position: chr8:15860200-15865966
Accession: 102002278
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000004239	THUMP	PF02926.17	3.4e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000004625	-	2740	XM_005351168	ENSMOCP00000004239	353 (aa)	XP_005351225	UPI00038C4B89

Gene Model

Click here to download ENSMOCG00000003447's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000003447's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000003447	Thumpd1	100	85.593	ENSG00000066654	THUMPD1	93	93.333	Homo_sapiens
ENSMOCG00000003447	Thumpd1	86	53.503	ENSAPOG00000008440	thumpd1	93	54.140	Acanthochromis_polyacanthus
ENSMOCG00000003447	Thumpd1	100	86.313	ENSAMEG00000006257	THUMPD1	99	86.313	Ailuropoda_melanoleuca
ENSMOCG00000003447	Thumpd1	76	58.303	ENSACIG00000024395	thumpd1	97	52.469	Amphilophus_citrinellus
ENSMOCG00000003447	Thumpd1	96	50.729	ENSAOCG00000003509	thumpd1	98	51.312	Amphiprion_ocellaris
ENSMOCG00000003447	Thumpd1	96	51.020	ENSAPEG00000010515	thumpd1	98	51.603	Amphiprion_percula
ENSMOCG00000003447	Thumpd1	76	57.778	ENSATEG00000004737	thumpd1	83	57.778	Anabas_testudineus
ENSMOCG00000003447	Thumpd1	80	73.239	ENSAPLG00000015259	THUMPD1	93	73.944	Anas_platyrhynchos
ENSMOCG00000003447	Thumpd1	76	69.065	ENSACAG00000009625	-	83	74.436	Anolis_carolinensis
ENSMOCG00000003447	Thumpd1	100	83.898	ENSANAG00000026882	-	100	83.898	Aotus_nancymaae
ENSMOCG00000003447	Thumpd1	100	68.079	ENSANAG00000027040	-	100	68.079	Aotus_nancymaae
ENSMOCG00000003447	Thumpd1	99	66.667	ENSANAG00000027311	-	100	66.667	Aotus_nancymaae
ENSMOCG00000003447	Thumpd1	90	50.467	ENSACLG00000004830	thumpd1	96	50.453	Astatotilapia_calliptera
ENSMOCG00000003447	Thumpd1	95	53.709	ENSAMXG00000012356	thumpd1	98	53.709	Astyanax_mexicanus
ENSMOCG00000003447	Thumpd1	99	85.434	ENSBTAG00000047673	THUMPD1	100	85.434	Bos_taurus
ENSMOCG00000003447	Thumpd1	96	84.412	ENSCJAG00000009499	THUMPD1	100	83.898	Callithrix_jacchus
ENSMOCG00000003447	Thumpd1	100	85.475	ENSCAFG00000017985	THUMPD1	99	85.475	Canis_familiaris
ENSMOCG00000003447	Thumpd1	100	85.475	ENSCAFG00020021861	THUMPD1	99	85.475	Canis_lupus_dingo
ENSMOCG00000003447	Thumpd1	99	84.874	ENSCHIG00000010134	THUMPD1	99	84.874	Capra_hircus
ENSMOCG00000003447	Thumpd1	100	85.634	ENSTSYG00000011537	THUMPD1	100	85.634	Carlito_syrichta
ENSMOCG00000003447	Thumpd1	96	84.164	ENSCPOG00000023684	-	100	83.662	Cavia_porcellus
ENSMOCG00000003447	Thumpd1	96	84.164	ENSCPOG00000008919	-	100	83.662	Cavia_porcellus
ENSMOCG00000003447	Thumpd1	100	77.966	ENSCCAG00000019379	-	86	77.966	Cebus_capucinus
ENSMOCG00000003447	Thumpd1	100	83.616	ENSCCAG00000030205	THUMPD1	100	83.616	Cebus_capucinus
ENSMOCG00000003447	Thumpd1	100	84.463	ENSCATG00000040309	THUMPD1	100	84.463	Cercocebus_atys
ENSMOCG00000003447	Thumpd1	99	69.832	ENSCATG00000020844	-	99	69.832	Cercocebus_atys
ENSMOCG00000003447	Thumpd1	100	82.768	ENSCLAG00000016508	THUMPD1	100	82.768	Chinchilla_lanigera
ENSMOCG00000003447	Thumpd1	100	67.318	ENSCSAG00000009860	-	80	67.318	Chlorocebus_sabaeus
ENSMOCG00000003447	Thumpd1	99	84.419	ENSCSAG00000007610	THUMPD1	99	84.419	Chlorocebus_sabaeus
ENSMOCG00000003447	Thumpd1	100	84.078	ENSCHOG00000005587	THUMPD1	100	84.078	Choloepus_hoffmanni
ENSMOCG00000003447	Thumpd1	90	70.533	ENSCPBG00000019055	THUMPD1	88	70.533	Chrysemys_picta_bellii
ENSMOCG00000003447	Thumpd1	87	74.110	ENSCANG00000035822	-	100	74.110	Colobus_angolensis_palliatus
ENSMOCG00000003447	Thumpd1	87	76.547	ENSCANG00000038770	THUMPD1	100	76.547	Colobus_angolensis_palliatus
ENSMOCG00000003447	Thumpd1	100	93.484	ENSCGRG00001014829	Thumpd1	100	93.484	Cricetulus_griseus_chok1gshd
ENSMOCG00000003447	Thumpd1	100	93.484	ENSCGRG00000000060	Thumpd1	100	93.484	Cricetulus_griseus_crigri
ENSMOCG00000003447	Thumpd1	74	57.955	ENSCSEG00000002041	thumpd1	84	57.955	Cynoglossus_semilaevis
ENSMOCG00000003447	Thumpd1	72	61.923	ENSCVAG00000014960	thumpd1	92	54.921	Cyprinodon_variegatus
ENSMOCG00000003447	Thumpd1	69	57.937	ENSDARG00000100264	thumpd1	72	59.127	Danio_rerio
ENSMOCG00000003447	Thumpd1	100	84.637	ENSDNOG00000043510	THUMPD1	100	84.637	Dasypus_novemcinctus
ENSMOCG00000003447	Thumpd1	99	80.737	ENSDORG00000028216	Thumpd1	100	80.223	Dipodomys_ordii
ENSMOCG00000003447	Thumpd1	78	34.471	FBgn0035532	CG15014	89	34.069	Drosophila_melanogaster
ENSMOCG00000003447	Thumpd1	100	74.722	ENSETEG00000002763	THUMPD1	84	75.000	Echinops_telfairi
ENSMOCG00000003447	Thumpd1	76	42.294	ENSEBUG00000011011	THUMPD1	75	42.294	Eptatretus_burgeri
ENSMOCG00000003447	Thumpd1	54	77.157	ENSEASG00005017428	-	100	77.157	Equus_asinus_asinus
ENSMOCG00000003447	Thumpd1	100	82.682	ENSECAG00000005354	THUMPD1	100	82.682	Equus_caballus
ENSMOCG00000003447	Thumpd1	100	81.543	ENSEEUG00000011256	THUMPD1	88	81.818	Erinaceus_europaeus
ENSMOCG00000003447	Thumpd1	74	60.536	ENSELUG00000013612	thumpd1	61	61.832	Esox_lucius
ENSMOCG00000003447	Thumpd1	100	86.034	ENSFCAG00000039296	THUMPD1	100	86.034	Felis_catus
ENSMOCG00000003447	Thumpd1	64	81.659	ENSFALG00000014029	THUMPD1	97	70.629	Ficedula_albicollis
ENSMOCG00000003447	Thumpd1	82	54.110	ENSFHEG00000013319	thumpd1	96	51.170	Fundulus_heteroclitus
ENSMOCG00000003447	Thumpd1	72	63.137	ENSGMOG00000003369	thumpd1	80	63.137	Gadus_morhua
ENSMOCG00000003447	Thumpd1	51	74.033	ENSGALG00000031384	-	75	74.033	Gallus_gallus
ENSMOCG00000003447	Thumpd1	82	55.172	ENSGAFG00000011000	thumpd1	90	55.517	Gambusia_affinis
ENSMOCG00000003447	Thumpd1	72	62.745	ENSGACG00000019511	thumpd1	76	62.745	Gasterosteus_aculeatus
ENSMOCG00000003447	Thumpd1	86	71.803	ENSGAGG00000008225	THUMPD1	94	71.803	Gopherus_agassizii
ENSMOCG00000003447	Thumpd1	100	85.311	ENSGGOG00000005231	-	80	85.311	Gorilla_gorilla
ENSMOCG00000003447	Thumpd1	96	61.176	ENSGGOG00000043232	-	100	61.299	Gorilla_gorilla
ENSMOCG00000003447	Thumpd1	90	50.467	ENSHBUG00000017996	thumpd1	96	50.151	Haplochromis_burtoni
ENSMOCG00000003447	Thumpd1	100	83.944	ENSHGLG00000011001	-	100	83.944	Heterocephalus_glaber_female
ENSMOCG00000003447	Thumpd1	60	70.561	ENSHGLG00000000952	-	100	70.561	Heterocephalus_glaber_female
ENSMOCG00000003447	Thumpd1	100	84.507	ENSHGLG00100016023	THUMPD1	100	84.507	Heterocephalus_glaber_male
ENSMOCG00000003447	Thumpd1	60	70.561	ENSHGLG00100010577	-	100	70.561	Heterocephalus_glaber_male
ENSMOCG00000003447	Thumpd1	69	54.918	ENSHCOG00000008618	thumpd1	56	54.918	Hippocampus_comes
ENSMOCG00000003447	Thumpd1	66	60.345	ENSIPUG00000012500	thumpd1	60	57.198	Ictalurus_punctatus
ENSMOCG00000003447	Thumpd1	100	86.441	ENSSTOG00000007011	THUMPD1	100	86.441	Ictidomys_tridecemlineatus
ENSMOCG00000003447	Thumpd1	100	83.616	ENSJJAG00000004295	-	100	83.616	Jaculus_jaculus
ENSMOCG00000003447	Thumpd1	73	52.632	ENSKMAG00000009545	thumpd1	88	45.082	Kryptolebias_marmoratus
ENSMOCG00000003447	Thumpd1	80	58.246	ENSLBEG00000009349	thumpd1	85	58.246	Labrus_bergylta
ENSMOCG00000003447	Thumpd1	74	66.667	ENSLACG00000005833	THUMPD1	78	66.667	Latimeria_chalumnae
ENSMOCG00000003447	Thumpd1	83	59.933	ENSLOCG00000000854	thumpd1	92	60.606	Lepisosteus_oculatus
ENSMOCG00000003447	Thumpd1	100	83.240	ENSLAFG00000025838	THUMPD1	100	83.240	Loxodonta_africana
ENSMOCG00000003447	Thumpd1	100	84.463	ENSMFAG00000036996	THUMPD1	100	84.463	Macaca_fascicularis
ENSMOCG00000003447	Thumpd1	87	70.513	ENSMFAG00000041474	-	100	70.513	Macaca_fascicularis
ENSMOCG00000003447	Thumpd1	87	70.192	ENSMMUG00000038414	-	100	70.192	Macaca_mulatta
ENSMOCG00000003447	Thumpd1	100	84.463	ENSMMUG00000004225	THUMPD1	100	84.463	Macaca_mulatta
ENSMOCG00000003447	Thumpd1	100	84.463	ENSMNEG00000020726	THUMPD1	100	84.463	Macaca_nemestrina
ENSMOCG00000003447	Thumpd1	87	70.192	ENSMNEG00000038856	-	100	70.192	Macaca_nemestrina
ENSMOCG00000003447	Thumpd1	87	70.645	ENSMLEG00000030012	-	99	70.645	Mandrillus_leucophaeus
ENSMOCG00000003447	Thumpd1	100	84.463	ENSMLEG00000036436	THUMPD1	100	84.463	Mandrillus_leucophaeus
ENSMOCG00000003447	Thumpd1	77	58.303	ENSMAMG00000006858	thumpd1	98	52.454	Mastacembelus_armatus
ENSMOCG00000003447	Thumpd1	90	50.467	ENSMZEG00005013693	thumpd1	96	50.151	Maylandia_zebra
ENSMOCG00000003447	Thumpd1	63	75.785	ENSMGAG00000010340	THUMPD1	99	75.785	Meleagris_gallopavo
ENSMOCG00000003447	Thumpd1	100	92.918	ENSMAUG00000013306	Thumpd1	100	92.918	Mesocricetus_auratus
ENSMOCG00000003447	Thumpd1	100	87.006	ENSMICG00000038483	-	100	87.006	Microcebus_murinus
ENSMOCG00000003447	Thumpd1	99	68.000	ENSMICG00000030865	-	96	68.000	Microcebus_murinus
ENSMOCG00000003447	Thumpd1	73	58.846	ENSMMOG00000011323	thumpd1	76	58.846	Mola_mola
ENSMOCG00000003447	Thumpd1	99	72.527	ENSMODG00000024776	-	99	74.176	Monodelphis_domestica
ENSMOCG00000003447	Thumpd1	99	73.077	ENSMODG00000006971	-	98	74.176	Monodelphis_domestica
ENSMOCG00000003447	Thumpd1	73	59.766	ENSMALG00000019522	thumpd1	98	52.665	Monopterus_albus
ENSMOCG00000003447	Thumpd1	100	90.935	MGP_CAROLIEiJ_G0030382	Thumpd1	100	90.935	Mus_caroli
ENSMOCG00000003447	Thumpd1	100	92.351	ENSMUSG00000030942	Thumpd1	100	92.351	Mus_musculus
ENSMOCG00000003447	Thumpd1	100	90.704	MGP_PahariEiJ_G0013593	Thumpd1	100	90.704	Mus_pahari
ENSMOCG00000003447	Thumpd1	90	83.801	ENSMLUG00000010547	THUMPD1	90	83.801	Myotis_lucifugus
ENSMOCG00000003447	Thumpd1	99	90.935	ENSNGAG00000018643	Thumpd1	100	90.935	Nannospalax_galili
ENSMOCG00000003447	Thumpd1	72	58.462	ENSNBRG00000006987	thumpd1	89	50.151	Neolamprologus_brichardi
ENSMOCG00000003447	Thumpd1	100	84.746	ENSNLEG00000012369	THUMPD1	100	84.746	Nomascus_leucogenys
ENSMOCG00000003447	Thumpd1	100	66.384	ENSOPRG00000011342	THUMPD1	86	66.384	Ochotona_princeps
ENSMOCG00000003447	Thumpd1	100	83.662	ENSODEG00000012360	THUMPD1	100	83.662	Octodon_degus
ENSMOCG00000003447	Thumpd1	73	58.238	ENSONIG00000000146	thumpd1	89	58.621	Oreochromis_niloticus
ENSMOCG00000003447	Thumpd1	99	66.209	ENSOANG00000014297	THUMPD1	100	66.209	Ornithorhynchus_anatinus
ENSMOCG00000003447	Thumpd1	62	78.182	ENSOCUG00000025354	-	100	78.182	Oryctolagus_cuniculus
ENSMOCG00000003447	Thumpd1	98	84.150	ENSOCUG00000009895	-	98	84.150	Oryctolagus_cuniculus
ENSMOCG00000003447	Thumpd1	76	56.506	ENSORLG00000027557	thumpd1	87	56.506	Oryzias_latipes
ENSMOCG00000003447	Thumpd1	76	56.134	ENSORLG00020010206	thumpd1	86	56.134	Oryzias_latipes_hni
ENSMOCG00000003447	Thumpd1	69	61.157	ENSORLG00015009581	thumpd1	78	61.157	Oryzias_latipes_hsok
ENSMOCG00000003447	Thumpd1	67	63.404	ENSOMEG00000019361	thumpd1	71	63.404	Oryzias_melastigma
ENSMOCG00000003447	Thumpd1	100	84.463	ENSOGAG00000026723	THUMPD1	100	84.463	Otolemur_garnettii
ENSMOCG00000003447	Thumpd1	99	85.154	ENSOARG00000013107	THUMPD1	99	85.154	Ovis_aries
ENSMOCG00000003447	Thumpd1	96	65.882	ENSPPAG00000001653	-	96	72.026	Pan_paniscus
ENSMOCG00000003447	Thumpd1	100	85.028	ENSPPAG00000033818	-	80	85.028	Pan_paniscus
ENSMOCG00000003447	Thumpd1	100	86.872	ENSPPRG00000014118	-	100	86.872	Panthera_pardus
ENSMOCG00000003447	Thumpd1	100	86.034	ENSPTIG00000013856	-	100	86.034	Panthera_tigris_altaica
ENSMOCG00000003447	Thumpd1	100	84.746	ENSPTRG00000007848	THUMPD1	80	84.746	Pan_troglodytes
ENSMOCG00000003447	Thumpd1	96	64.809	ENSPTRG00000046073	-	100	64.789	Pan_troglodytes
ENSMOCG00000003447	Thumpd1	100	84.463	ENSPANG00000025507	THUMPD1	100	84.463	Papio_anubis
ENSMOCG00000003447	Thumpd1	87	70.418	ENSPANG00000034881	-	99	70.418	Papio_anubis
ENSMOCG00000003447	Thumpd1	67	69.787	ENSPKIG00000014491	thumpd1	73	69.787	Paramormyrops_kingsleyae
ENSMOCG00000003447	Thumpd1	76	78.229	ENSPSIG00000012430	THUMPD1	93	78.229	Pelodiscus_sinensis
ENSMOCG00000003447	Thumpd1	75	59.398	ENSPMGG00000014479	thumpd1	91	59.774	Periophthalmus_magnuspinnatus
ENSMOCG00000003447	Thumpd1	66	74.786	ENSPEMG00000002608	-	100	74.786	Peromyscus_maniculatus_bairdii
ENSMOCG00000003447	Thumpd1	61	52.558	ENSPMAG00000001389	thumpd1	96	53.521	Petromyzon_marinus
ENSMOCG00000003447	Thumpd1	99	72.329	ENSPCIG00000029241	THUMPD1	72	73.425	Phascolarctos_cinereus
ENSMOCG00000003447	Thumpd1	83	53.247	ENSPFOG00000012649	thumpd1	94	53.571	Poecilia_formosa
ENSMOCG00000003447	Thumpd1	83	53.268	ENSPLAG00000000137	thumpd1	94	53.595	Poecilia_latipinna
ENSMOCG00000003447	Thumpd1	83	53.420	ENSPMEG00000007750	thumpd1	94	53.746	Poecilia_mexicana
ENSMOCG00000003447	Thumpd1	73	59.615	ENSPREG00000000144	thumpd1	87	60.000	Poecilia_reticulata
ENSMOCG00000003447	Thumpd1	78	83.032	ENSPPYG00000007160	-	100	83.032	Pongo_abelii
ENSMOCG00000003447	Thumpd1	78	79.078	ENSPCAG00000001534	THUMPD1	100	79.078	Procavia_capensis
ENSMOCG00000003447	Thumpd1	100	86.723	ENSPCOG00000024663	THUMPD1	100	86.723	Propithecus_coquereli
ENSMOCG00000003447	Thumpd1	100	76.667	ENSPVAG00000005659	-	100	76.667	Pteropus_vampyrus
ENSMOCG00000003447	Thumpd1	61	71.429	ENSPVAG00000003286	-	99	71.429	Pteropus_vampyrus
ENSMOCG00000003447	Thumpd1	90	50.467	ENSPNYG00000007061	thumpd1	97	49.558	Pundamilia_nyererei
ENSMOCG00000003447	Thumpd1	79	57.045	ENSPNAG00000024872	thumpd1	93	59.091	Pygocentrus_nattereri
ENSMOCG00000003447	Thumpd1	62	89.041	ENSRNOG00000014946	AABR07005588.1	100	89.041	Rattus_norvegicus
ENSMOCG00000003447	Thumpd1	87	73.786	ENSRBIG00000040136	-	100	73.786	Rhinopithecus_bieti
ENSMOCG00000003447	Thumpd1	100	84.463	ENSRBIG00000040752	THUMPD1	100	84.463	Rhinopithecus_bieti
ENSMOCG00000003447	Thumpd1	87	73.463	ENSRROG00000045699	-	100	73.463	Rhinopithecus_roxellana
ENSMOCG00000003447	Thumpd1	100	84.746	ENSRROG00000042189	THUMPD1	100	84.746	Rhinopithecus_roxellana
ENSMOCG00000003447	Thumpd1	100	83.616	ENSSBOG00000034246	THUMPD1	100	83.616	Saimiri_boliviensis_boliviensis
ENSMOCG00000003447	Thumpd1	99	73.829	ENSSHAG00000003853	THUMPD1	99	73.829	Sarcophilus_harrisii
ENSMOCG00000003447	Thumpd1	73	55.172	ENSSFOG00015007512	thumpd1	77	55.172	Scleropages_formosus
ENSMOCG00000003447	Thumpd1	93	51.515	ENSSMAG00000000723	thumpd1	91	51.515	Scophthalmus_maximus
ENSMOCG00000003447	Thumpd1	80	54.577	ENSSDUG00000014502	thumpd1	87	56.294	Seriola_dumerili
ENSMOCG00000003447	Thumpd1	80	54.930	ENSSLDG00000007694	thumpd1	87	56.643	Seriola_lalandi_dorsalis
ENSMOCG00000003447	Thumpd1	77	76.619	ENSSPUG00000005096	THUMPD1	83	77.698	Sphenodon_punctatus
ENSMOCG00000003447	Thumpd1	85	53.094	ENSSPAG00000006993	thumpd1	83	57.818	Stegastes_partitus
ENSMOCG00000003447	Thumpd1	100	85.237	ENSSSCG00000024748	THUMPD1	100	85.237	Sus_scrofa
ENSMOCG00000003447	Thumpd1	69	80.816	ENSTGUG00000009247	THUMPD1	89	81.633	Taeniopygia_guttata
ENSMOCG00000003447	Thumpd1	74	58.935	ENSTRUG00000015656	thumpd1	96	53.226	Takifugu_rubripes
ENSMOCG00000003447	Thumpd1	84	55.743	ENSTNIG00000001584	thumpd1	95	56.081	Tetraodon_nigroviridis
ENSMOCG00000003447	Thumpd1	100	84.746	ENSTBEG00000005252	THUMPD1	88	84.746	Tupaia_belangeri
ENSMOCG00000003447	Thumpd1	100	85.475	ENSTTRG00000016435	THUMPD1	100	85.475	Tursiops_truncatus
ENSMOCG00000003447	Thumpd1	62	73.214	ENSUAMG00000005779	-	100	73.214	Ursus_americanus
ENSMOCG00000003447	Thumpd1	100	83.520	ENSVPAG00000003422	THUMPD1	100	83.520	Vicugna_pacos
ENSMOCG00000003447	Thumpd1	100	85.196	ENSVVUG00000023241	THUMPD1	99	85.196	Vulpes_vulpes
ENSMOCG00000003447	Thumpd1	78	61.232	ENSXETG00000005539	thumpd1	93	61.455	Xenopus_tropicalis
ENSMOCG00000003447	Thumpd1	72	59.533	ENSXMAG00000026052	thumpd1	89	55.363	Xiphophorus_maculatus