EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000003458 (Gene tree)
Gene ID: 101989415
Gene Symbol: Twistnb
Alias: 2810024J17Rik|D16Wsu83e
Full Name: TWIST neighbor
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 10854 bases
Position: chr1:81211105-81221958
Accession: 101989415
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000004249	SHS2_Rpb7-N	PF03876.17	2.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000004641	-	1313	XM_005343862	ENSMOCP00000004249	324 (aa)	XP_005343919	UPI00038BB5A8

Gene Model

Click here to download ENSMOCG00000003458's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000003458's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000003458	Twistnb	98	77.259	ENSG00000105849	TWISTNB	95	76.471	Homo_sapiens
ENSMOCG00000003458	Twistnb	98	68.293	ENSAMEG00000008558	TWISTNB	94	68.293	Ailuropoda_melanoleuca
ENSMOCG00000003458	Twistnb	95	41.796	ENSACIG00000020400	twistnb	80	45.847	Amphilophus_citrinellus
ENSMOCG00000003458	Twistnb	59	59.896	ENSATEG00000017956	twistnb	83	46.006	Anabas_testudineus
ENSMOCG00000003458	Twistnb	52	64.497	ENSACAG00000011817	TWISTNB	86	64.497	Anolis_carolinensis
ENSMOCG00000003458	Twistnb	98	76.324	ENSANAG00000026418	TWISTNB	95	76.324	Aotus_nancymaae
ENSMOCG00000003458	Twistnb	59	58.115	ENSACLG00000022280	twistnb	73	47.635	Astatotilapia_calliptera
ENSMOCG00000003458	Twistnb	59	55.789	ENSAMXG00000035868	twistnb	59	55.155	Astyanax_mexicanus
ENSMOCG00000003458	Twistnb	95	74.593	ENSBTAG00000006721	TWISTNB	92	73.290	Bos_taurus
ENSMOCG00000003458	Twistnb	98	77.329	ENSCJAG00000001148	TWISTNB	96	76.852	Callithrix_jacchus
ENSMOCG00000003458	Twistnb	98	72.121	ENSCAFG00000002511	TWISTNB	94	74.242	Canis_familiaris
ENSMOCG00000003458	Twistnb	98	73.006	ENSCAFG00020002140	TWISTNB	88	75.000	Canis_lupus_dingo
ENSMOCG00000003458	Twistnb	95	75.161	ENSCHIG00000024078	TWISTNB	86	77.700	Capra_hircus
ENSMOCG00000003458	Twistnb	95	75.484	ENSTSYG00000001471	TWISTNB	94	75.466	Carlito_syrichta
ENSMOCG00000003458	Twistnb	98	77.882	ENSCPOG00000031651	TWISTNB	95	77.882	Cavia_porcellus
ENSMOCG00000003458	Twistnb	98	76.875	ENSCCAG00000026416	TWISTNB	95	76.398	Cebus_capucinus
ENSMOCG00000003458	Twistnb	95	76.375	ENSCATG00000035621	TWISTNB	94	76.324	Cercocebus_atys
ENSMOCG00000003458	Twistnb	98	76.636	ENSCLAG00000012696	TWISTNB	95	76.636	Chinchilla_lanigera
ENSMOCG00000003458	Twistnb	98	76.947	ENSCSAG00000013544	TWISTNB	95	76.161	Chlorocebus_sabaeus
ENSMOCG00000003458	Twistnb	73	86.364	ENSCHOG00000006034	TWISTNB	75	86.364	Choloepus_hoffmanni
ENSMOCG00000003458	Twistnb	91	59.933	ENSCPBG00000000367	TWISTNB	90	59.933	Chrysemys_picta_bellii
ENSMOCG00000003458	Twistnb	98	76.947	ENSCANG00000038759	TWISTNB	95	76.161	Colobus_angolensis_palliatus
ENSMOCG00000003458	Twistnb	100	86.728	ENSCGRG00001000499	Twistnb	98	86.728	Cricetulus_griseus_chok1gshd
ENSMOCG00000003458	Twistnb	95	76.623	ENSDNOG00000006438	-	92	77.023	Dasypus_novemcinctus
ENSMOCG00000003458	Twistnb	95	75.649	ENSDORG00000007795	Twistnb	98	76.341	Dipodomys_ordii
ENSMOCG00000003458	Twistnb	99	78.638	ENSEASG00005021702	TWISTNB	91	78.328	Equus_asinus_asinus
ENSMOCG00000003458	Twistnb	99	78.638	ENSECAG00000014563	TWISTNB	91	78.328	Equus_caballus
ENSMOCG00000003458	Twistnb	92	45.981	ENSELUG00000000098	TWISTNB	50	61.111	Esox_lucius
ENSMOCG00000003458	Twistnb	98	77.743	ENSFCAG00000025987	TWISTNB	95	76.947	Felis_catus
ENSMOCG00000003458	Twistnb	79	54.212	ENSFALG00000009761	TWISTNB	87	54.745	Ficedula_albicollis
ENSMOCG00000003458	Twistnb	99	75.542	ENSFDAG00000017368	TWISTNB	96	75.542	Fukomys_damarensis
ENSMOCG00000003458	Twistnb	54	62.069	ENSFHEG00000013318	twistnb	60	52.790	Fundulus_heteroclitus
ENSMOCG00000003458	Twistnb	87	59.431	ENSGALG00000010863	TWISTNB	73	57.770	Gallus_gallus
ENSMOCG00000003458	Twistnb	77	44.664	ENSGACG00000006425	twistnb	100	43.182	Gasterosteus_aculeatus
ENSMOCG00000003458	Twistnb	98	76.947	ENSGGOG00000026888	TWISTNB	95	76.161	Gorilla_gorilla
ENSMOCG00000003458	Twistnb	59	58.115	ENSHBUG00000020155	twistnb	73	47.635	Haplochromis_burtoni
ENSMOCG00000003458	Twistnb	95	76.699	ENSHGLG00000010976	TWISTNB	91	76.375	Heterocephalus_glaber_female
ENSMOCG00000003458	Twistnb	95	76.699	ENSHGLG00100005410	TWISTNB	91	76.375	Heterocephalus_glaber_male
ENSMOCG00000003458	Twistnb	65	52.607	ENSIPUG00000004117	twistnb	55	52.764	Ictalurus_punctatus
ENSMOCG00000003458	Twistnb	98	78.438	ENSSTOG00000022702	TWISTNB	88	77.950	Ictidomys_tridecemlineatus
ENSMOCG00000003458	Twistnb	95	78.827	ENSJJAG00000015887	Twistnb	91	78.502	Jaculus_jaculus
ENSMOCG00000003458	Twistnb	95	52.885	ENSLACG00000010508	TWISTNB	52	70.330	Latimeria_chalumnae
ENSMOCG00000003458	Twistnb	58	63.102	ENSLOCG00000011399	twistnb	68	58.850	Lepisosteus_oculatus
ENSMOCG00000003458	Twistnb	98	76.324	ENSLAFG00000008755	TWISTNB	96	75.542	Loxodonta_africana
ENSMOCG00000003458	Twistnb	98	76.947	ENSMFAG00000045328	TWISTNB	95	76.161	Macaca_fascicularis
ENSMOCG00000003458	Twistnb	98	76.636	ENSMMUG00000009609	TWISTNB	93	76.636	Macaca_mulatta
ENSMOCG00000003458	Twistnb	98	76.324	ENSMNEG00000041159	TWISTNB	95	75.542	Macaca_nemestrina
ENSMOCG00000003458	Twistnb	95	76.699	ENSMLEG00000042783	TWISTNB	94	76.636	Mandrillus_leucophaeus
ENSMOCG00000003458	Twistnb	59	58.115	ENSMZEG00005007561	twistnb	73	47.635	Maylandia_zebra
ENSMOCG00000003458	Twistnb	95	78.317	ENSMICG00000036489	TWISTNB	96	78.193	Microcebus_murinus
ENSMOCG00000003458	Twistnb	86	61.484	ENSMODG00000001402	-	61	61.702	Monodelphis_domestica
ENSMOCG00000003458	Twistnb	53	58.480	ENSMALG00000016407	twistnb	78	43.522	Monopterus_albus
ENSMOCG00000003458	Twistnb	99	84.830	MGP_CAROLIEiJ_G0017692	Twistnb	98	84.830	Mus_caroli
ENSMOCG00000003458	Twistnb	98	83.750	ENSMUSG00000020561	Twistnb	98	83.851	Mus_musculus
ENSMOCG00000003458	Twistnb	98	84.688	MGP_PahariEiJ_G0029450	Twistnb	97	84.688	Mus_pahari
ENSMOCG00000003458	Twistnb	99	84.472	MGP_SPRETEiJ_G0018534	Twistnb	98	85.093	Mus_spretus
ENSMOCG00000003458	Twistnb	98	77.743	ENSMPUG00000013948	TWISTNB	89	77.743	Mustela_putorius_furo
ENSMOCG00000003458	Twistnb	91	73.401	ENSMLUG00000008848	TWISTNB	95	74.074	Myotis_lucifugus
ENSMOCG00000003458	Twistnb	61	90.452	ENSNGAG00000022455	Twistnb	99	90.452	Nannospalax_galili
ENSMOCG00000003458	Twistnb	59	58.115	ENSNBRG00000008652	twistnb	78	47.811	Neolamprologus_brichardi
ENSMOCG00000003458	Twistnb	93	78.146	ENSNLEG00000035755	TWISTNB	87	78.716	Nomascus_leucogenys
ENSMOCG00000003458	Twistnb	95	73.718	ENSOPRG00000016109	TWISTNB	86	76.125	Ochotona_princeps
ENSMOCG00000003458	Twistnb	98	76.012	ENSODEG00000007222	TWISTNB	96	76.161	Octodon_degus
ENSMOCG00000003458	Twistnb	90	45.307	ENSORLG00000004005	twistnb	71	47.826	Oryzias_latipes
ENSMOCG00000003458	Twistnb	90	45.955	ENSORLG00020002579	twistnb	79	48.495	Oryzias_latipes_hni
ENSMOCG00000003458	Twistnb	91	45.484	ENSORLG00015013403	twistnb	74	47.604	Oryzias_latipes_hsok
ENSMOCG00000003458	Twistnb	94	77.023	ENSOGAG00000009189	TWISTNB	91	77.097	Otolemur_garnettii
ENSMOCG00000003458	Twistnb	95	75.728	ENSOARG00000009803	TWISTNB	85	78.322	Ovis_aries
ENSMOCG00000003458	Twistnb	95	77.346	ENSPPAG00000034623	TWISTNB	91	77.023	Pan_paniscus
ENSMOCG00000003458	Twistnb	98	77.116	ENSPPRG00000005877	TWISTNB	95	76.324	Panthera_pardus
ENSMOCG00000003458	Twistnb	87	78.799	ENSPTIG00000021539	TWISTNB	94	78.445	Panthera_tigris_altaica
ENSMOCG00000003458	Twistnb	98	77.570	ENSPTRG00000018962	TWISTNB	95	76.780	Pan_troglodytes
ENSMOCG00000003458	Twistnb	95	76.699	ENSPANG00000015736	TWISTNB	95	75.851	Papio_anubis
ENSMOCG00000003458	Twistnb	90	58.163	ENSPCIG00000017456	TWISTNB	84	58.451	Phascolarctos_cinereus
ENSMOCG00000003458	Twistnb	98	75.701	ENSPPYG00000017752	TWISTNB	95	75.232	Pongo_abelii
ENSMOCG00000003458	Twistnb	95	75.806	ENSPCOG00000017601	TWISTNB	96	77.640	Propithecus_coquereli
ENSMOCG00000003458	Twistnb	98	72.981	ENSPVAG00000015574	TWISTNB	95	72.531	Pteropus_vampyrus
ENSMOCG00000003458	Twistnb	59	58.115	ENSPNYG00000002674	twistnb	78	47.635	Pundamilia_nyererei
ENSMOCG00000003458	Twistnb	98	84.639	ENSRNOG00000010750	Twistnb	100	84.112	Rattus_norvegicus
ENSMOCG00000003458	Twistnb	98	76.947	ENSRBIG00000043007	TWISTNB	94	76.161	Rhinopithecus_bieti
ENSMOCG00000003458	Twistnb	98	76.947	ENSRROG00000040155	TWISTNB	95	76.161	Rhinopithecus_roxellana
ENSMOCG00000003458	Twistnb	98	75.389	ENSSBOG00000023188	TWISTNB	95	76.012	Saimiri_boliviensis_boliviensis
ENSMOCG00000003458	Twistnb	55	58.659	ENSSFOG00015012788	twistnb	56	58.659	Scleropages_formosus
ENSMOCG00000003458	Twistnb	63	53.431	ENSSMAG00000012792	twistnb	78	46.980	Scophthalmus_maximus
ENSMOCG00000003458	Twistnb	92	51.613	ENSSPUG00000007595	TWISTNB	90	50.871	Sphenodon_punctatus
ENSMOCG00000003458	Twistnb	95	77.742	ENSSSCG00000025298	TWISTNB	92	77.742	Sus_scrofa
ENSMOCG00000003458	Twistnb	98	43.505	ENSTNIG00000017778	twistnb	58	54.974	Tetraodon_nigroviridis
ENSMOCG00000003458	Twistnb	98	77.188	ENSTBEG00000003554	TWISTNB	95	77.019	Tupaia_belangeri
ENSMOCG00000003458	Twistnb	98	78.997	ENSUAMG00000017593	TWISTNB	95	78.997	Ursus_americanus
ENSMOCG00000003458	Twistnb	98	78.683	ENSUMAG00000022203	TWISTNB	95	78.683	Ursus_maritimus
ENSMOCG00000003458	Twistnb	98	73.620	ENSVVUG00000008386	TWISTNB	95	75.767	Vulpes_vulpes