EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000003536 (Gene tree)
Gene ID: 102002425
Gene Symbol: Snai3
Alias: Smuc|Snail-related gene from muscle cells|Zfp293
Full Name: snail family transcriptional repressor 3
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 6470 bases
Position: chr4:30220591-30227060
Accession: 102002425
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000004311	zf-C2H2	PF00096.26	4.5e-25	1	4
ENSMOCP00000004311	zf-C2H2	PF00096.26	4.5e-25	2	4
ENSMOCP00000004311	zf-C2H2	PF00096.26	4.5e-25	3	4
ENSMOCP00000004311	zf-C2H2	PF00096.26	4.5e-25	4	4
ENSMOCP00000004311	zf-met	PF12874.7	1.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000004737	-	1100	XM_005345795	ENSMOCP00000004311	287 (aa)	XP_005345852	UPI00038C6332

Gene Model

Click here to download ENSMOCG00000003536's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000003536's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000003536	Snai3	52	37.226	ENSMOCG00000017961	Zfp39	72	37.226
ENSMOCG00000003536	Snai3	51	44.000	ENSMOCG00000005017	Zbtb17	53	44.000
ENSMOCG00000003536	Snai3	57	40.336	ENSMOCG00000003394	-	60	40.336
ENSMOCG00000003536	Snai3	71	48.649	ENSMOCG00000022870	Zfp236	57	48.649
ENSMOCG00000003536	Snai3	55	34.848	ENSMOCG00000004478	-	100	34.848
ENSMOCG00000003536	Snai3	61	42.105	ENSMOCG00000007791	-	69	42.105
ENSMOCG00000003536	Snai3	64	36.090	ENSMOCG00000015696	Mynn	53	36.090
ENSMOCG00000003536	Snai3	54	36.296	ENSMOCG00000001762	-	71	36.296
ENSMOCG00000003536	Snai3	50	34.559	ENSMOCG00000005503	Zfp319	79	34.559
ENSMOCG00000003536	Snai3	52	44.872	ENSMOCG00000002167	Zfp712	87	44.872
ENSMOCG00000003536	Snai3	69	37.778	ENSMOCG00000007851	-	79	37.778
ENSMOCG00000003536	Snai3	53	43.269	ENSMOCG00000016267	Prdm5	76	43.269
ENSMOCG00000003536	Snai3	66	38.182	ENSMOCG00000016268	Zfp574	56	38.182
ENSMOCG00000003536	Snai3	80	39.316	ENSMOCG00000020296	Zfp628	56	37.778
ENSMOCG00000003536	Snai3	62	43.373	ENSMOCG00000009299	Zfp784	81	43.373
ENSMOCG00000003536	Snai3	79	41.758	ENSMOCG00000004895	Zfp64	60	41.758
ENSMOCG00000003536	Snai3	50	38.961	ENSMOCG00000014774	Zfp961	69	38.961

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000003536	Snai3	100	72.260	ENSG00000185669	SNAI3	100	73.973	Homo_sapiens
ENSMOCG00000003536	Snai3	99	47.917	ENSG00000019549	SNAI2	99	48.611	Homo_sapiens
ENSMOCG00000003536	Snai3	99	46.853	ENSANAG00000021163	SNAI2	99	47.552	Aotus_nancymaae
ENSMOCG00000003536	Snai3	100	73.973	ENSANAG00000032748	SNAI3	100	73.973	Aotus_nancymaae
ENSMOCG00000003536	Snai3	99	67.466	ENSBTAG00000017528	SNAI3	99	67.466	Bos_taurus
ENSMOCG00000003536	Snai3	99	47.018	ENSBTAG00000013227	SNAI2	99	47.552	Bos_taurus
ENSMOCG00000003536	Snai3	99	47.917	ENSCJAG00000013499	SNAI2	99	48.611	Callithrix_jacchus
ENSMOCG00000003536	Snai3	100	66.096	ENSCAFG00000029458	SNAI3	100	67.808	Canis_familiaris
ENSMOCG00000003536	Snai3	100	66.438	ENSCAFG00020004719	SNAI3	100	68.151	Canis_lupus_dingo
ENSMOCG00000003536	Snai3	99	47.018	ENSCHIG00000024410	SNAI2	99	47.552	Capra_hircus
ENSMOCG00000003536	Snai3	99	67.123	ENSCHIG00000018087	SNAI3	99	67.123	Capra_hircus
ENSMOCG00000003536	Snai3	91	70.455	ENSTSYG00000025594	SNAI3	91	71.970	Carlito_syrichta
ENSMOCG00000003536	Snai3	99	47.917	ENSCCAG00000024100	SNAI2	99	48.611	Cebus_capucinus
ENSMOCG00000003536	Snai3	100	74.315	ENSCATG00000031714	SNAI3	100	74.315	Cercocebus_atys
ENSMOCG00000003536	Snai3	99	47.917	ENSCATG00000028656	SNAI2	99	48.611	Cercocebus_atys
ENSMOCG00000003536	Snai3	100	68.493	ENSCSAG00000003047	SNAI3	100	68.493	Chlorocebus_sabaeus
ENSMOCG00000003536	Snai3	99	47.917	ENSCSAG00000014787	SNAI2	99	48.611	Chlorocebus_sabaeus
ENSMOCG00000003536	Snai3	99	58.725	ENSCPBG00000023474	SNAI3	99	58.725	Chrysemys_picta_bellii
ENSMOCG00000003536	Snai3	56	56.287	ENSCSAVG00000009819	-	87	56.287	Ciona_savignyi
ENSMOCG00000003536	Snai3	99	47.917	ENSCANG00000029656	SNAI2	99	48.611	Colobus_angolensis_palliatus
ENSMOCG00000003536	Snai3	93	71.587	ENSCANG00000031124	SNAI3	83	71.587	Colobus_angolensis_palliatus
ENSMOCG00000003536	Snai3	100	89.895	ENSCGRG00001011389	Snai3	100	89.895	Cricetulus_griseus_chok1gshd
ENSMOCG00000003536	Snai3	100	89.895	ENSCGRG00000014932	Snai3	100	89.895	Cricetulus_griseus_crigri
ENSMOCG00000003536	Snai3	79	48.485	ENSDNOG00000035204	-	100	51.082	Dasypus_novemcinctus
ENSMOCG00000003536	Snai3	91	66.165	ENSEASG00005000614	SNAI3	87	68.045	Equus_asinus_asinus
ENSMOCG00000003536	Snai3	99	68.041	ENSECAG00000012131	SNAI3	99	69.759	Equus_caballus
ENSMOCG00000003536	Snai3	100	60.274	ENSEEUG00000000841	SNAI3	100	60.274	Erinaceus_europaeus
ENSMOCG00000003536	Snai3	99	49.310	ENSELUG00000018742	-	99	49.310	Esox_lucius
ENSMOCG00000003536	Snai3	100	64.138	ENSFCAG00000043885	SNAI3	100	64.138	Felis_catus
ENSMOCG00000003536	Snai3	99	59.322	ENSGAGG00000023571	SNAI3	99	59.322	Gopherus_agassizii
ENSMOCG00000003536	Snai3	100	72.260	ENSGGOG00000012559	SNAI3	100	73.973	Gorilla_gorilla
ENSMOCG00000003536	Snai3	99	47.917	ENSGGOG00000000959	SNAI2	99	48.611	Gorilla_gorilla
ENSMOCG00000003536	Snai3	51	71.233	ENSIPUG00000000131	snai2	99	47.203	Ictalurus_punctatus
ENSMOCG00000003536	Snai3	100	78.082	ENSJJAG00000019934	Snai3	100	79.452	Jaculus_jaculus
ENSMOCG00000003536	Snai3	99	47.917	ENSLOCG00000005992	SNAI2	99	47.917	Lepisosteus_oculatus
ENSMOCG00000003536	Snai3	100	67.466	ENSLAFG00000005117	SNAI3	100	68.493	Loxodonta_africana
ENSMOCG00000003536	Snai3	100	73.973	ENSMFAG00000032064	SNAI3	100	73.973	Macaca_fascicularis
ENSMOCG00000003536	Snai3	99	47.917	ENSMFAG00000046061	SNAI2	99	48.611	Macaca_fascicularis
ENSMOCG00000003536	Snai3	99	47.917	ENSMMUG00000016195	SNAI2	99	48.611	Macaca_mulatta
ENSMOCG00000003536	Snai3	100	73.973	ENSMMUG00000008716	SNAI3	100	73.973	Macaca_mulatta
ENSMOCG00000003536	Snai3	99	47.917	ENSMNEG00000034216	SNAI2	99	48.611	Macaca_nemestrina
ENSMOCG00000003536	Snai3	100	74.315	ENSMNEG00000045515	SNAI3	100	74.315	Macaca_nemestrina
ENSMOCG00000003536	Snai3	99	47.917	ENSMLEG00000034407	SNAI2	99	48.611	Mandrillus_leucophaeus
ENSMOCG00000003536	Snai3	92	72.593	ENSMLEG00000033191	SNAI3	92	72.593	Mandrillus_leucophaeus
ENSMOCG00000003536	Snai3	100	87.805	ENSMAUG00000001685	Snai3	100	87.805	Mesocricetus_auratus
ENSMOCG00000003536	Snai3	99	46.528	ENSMODG00000010173	SNAI2	99	46.528	Monodelphis_domestica
ENSMOCG00000003536	Snai3	100	85.714	MGP_CAROLIEiJ_G0031662	Snai3	100	85.714	Mus_caroli
ENSMOCG00000003536	Snai3	99	46.503	MGP_CAROLIEiJ_G0020483	Snai2	99	48.097	Mus_caroli
ENSMOCG00000003536	Snai3	100	86.760	ENSMUSG00000006587	Snai3	100	86.760	Mus_musculus
ENSMOCG00000003536	Snai3	99	46.503	ENSMUSG00000022676	Snai2	99	48.097	Mus_musculus
ENSMOCG00000003536	Snai3	100	87.153	MGP_PahariEiJ_G0023260	Snai3	100	87.153	Mus_pahari
ENSMOCG00000003536	Snai3	99	46.503	MGP_PahariEiJ_G0016188	Snai2	99	48.097	Mus_pahari
ENSMOCG00000003536	Snai3	99	48.084	MGP_SPRETEiJ_G0021379	Snai2	99	48.097	Mus_spretus
ENSMOCG00000003536	Snai3	100	86.760	MGP_SPRETEiJ_G0032780	Snai3	100	86.760	Mus_spretus
ENSMOCG00000003536	Snai3	100	64.384	ENSMPUG00000008104	SNAI3	100	66.096	Mustela_putorius_furo
ENSMOCG00000003536	Snai3	100	80.137	ENSNGAG00000023039	Snai3	100	80.137	Nannospalax_galili
ENSMOCG00000003536	Snai3	100	72.945	ENSNLEG00000000595	SNAI3	100	74.658	Nomascus_leucogenys
ENSMOCG00000003536	Snai3	99	48.264	ENSNLEG00000013421	SNAI2	99	48.958	Nomascus_leucogenys
ENSMOCG00000003536	Snai3	98	47.719	ENSMEUG00000009510	SNAI2	100	47.719	Notamacropus_eugenii
ENSMOCG00000003536	Snai3	100	68.166	ENSOGAG00000000419	SNAI3	100	71.233	Otolemur_garnettii
ENSMOCG00000003536	Snai3	90	48.507	ENSOARG00000013069	-	99	48.507	Ovis_aries
ENSMOCG00000003536	Snai3	99	47.018	ENSOARG00000013030	SNAI2	99	47.552	Ovis_aries
ENSMOCG00000003536	Snai3	100	71.918	ENSPPAG00000043301	SNAI3	100	73.630	Pan_paniscus
ENSMOCG00000003536	Snai3	99	47.917	ENSPPAG00000015662	SNAI2	99	48.611	Pan_paniscus
ENSMOCG00000003536	Snai3	99	63.986	ENSPPRG00000008511	SNAI3	99	63.986	Panthera_pardus
ENSMOCG00000003536	Snai3	100	71.918	ENSPTRG00000008460	SNAI3	100	73.630	Pan_troglodytes
ENSMOCG00000003536	Snai3	99	47.917	ENSPTRG00000020235	SNAI2	99	48.611	Pan_troglodytes
ENSMOCG00000003536	Snai3	100	74.658	ENSPANG00000000509	SNAI3	100	74.658	Papio_anubis
ENSMOCG00000003536	Snai3	99	47.917	ENSPANG00000017540	SNAI2	99	48.611	Papio_anubis
ENSMOCG00000003536	Snai3	99	51.667	ENSPKIG00000007872	SNAI3	99	51.667	Paramormyrops_kingsleyae
ENSMOCG00000003536	Snai3	76	60.435	ENSPSIG00000004262	SNAI3	91	60.435	Pelodiscus_sinensis
ENSMOCG00000003536	Snai3	56	65.839	ENSPMGG00000013179	SNAI2	99	46.488	Periophthalmus_magnuspinnatus
ENSMOCG00000003536	Snai3	99	46.528	ENSPCIG00000025156	SNAI2	99	46.528	Phascolarctos_cinereus
ENSMOCG00000003536	Snai3	100	71.918	ENSPPYG00000007643	SNAI3	100	73.630	Pongo_abelii
ENSMOCG00000003536	Snai3	99	47.917	ENSPPYG00000018578	SNAI2	99	48.611	Pongo_abelii
ENSMOCG00000003536	Snai3	100	86.411	ENSRNOG00000013586	Snai3	100	86.411	Rattus_norvegicus
ENSMOCG00000003536	Snai3	99	47.917	ENSRBIG00000041133	SNAI2	99	48.611	Rhinopithecus_bieti
ENSMOCG00000003536	Snai3	100	74.315	ENSRBIG00000025770	SNAI3	100	74.315	Rhinopithecus_bieti
ENSMOCG00000003536	Snai3	100	74.658	ENSRROG00000032757	SNAI3	100	74.658	Rhinopithecus_roxellana
ENSMOCG00000003536	Snai3	99	47.917	ENSRROG00000032273	SNAI2	99	48.611	Rhinopithecus_roxellana
ENSMOCG00000003536	Snai3	99	47.917	ENSSBOG00000035774	SNAI2	99	48.611	Saimiri_boliviensis_boliviensis
ENSMOCG00000003536	Snai3	99	46.528	ENSSHAG00000004205	SNAI2	99	46.528	Sarcophilus_harrisii
ENSMOCG00000003536	Snai3	99	48.958	ENSSFOG00015018025	SNAI2	99	50.694	Scleropages_formosus
ENSMOCG00000003536	Snai3	99	46.689	ENSSFOG00015016115	snai3	93	47.525	Scleropages_formosus
ENSMOCG00000003536	Snai3	99	66.327	ENSTTRG00000006262	SNAI3	99	66.327	Tursiops_truncatus
ENSMOCG00000003536	Snai3	100	68.836	ENSUAMG00000020030	SNAI3	100	70.205	Ursus_americanus
ENSMOCG00000003536	Snai3	100	66.781	ENSVVUG00000003233	SNAI3	100	68.493	Vulpes_vulpes
ENSMOCG00000003536	Snai3	99	47.423	ENSXETG00000024006	snai2	99	47.423	Xenopus_tropicalis