EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000003613 (Gene tree)
Gene ID: 101997739
Gene Symbol: Fam172a
Alias: 1110033M05Rik|2610318O14Rik|53-E6|9430037D06Rik|pEN87
Full Name: family with sequence similarity 172 member A
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 380896 bases
Position: chr19:21113691-21494586
Accession: 101997739
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000004393	Arb2	PF09757.9	4.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000004852	-	921	XM_013349683	ENSMOCP00000004395	306 (aa)	XP_013205137	UPI00067A9D87
ENSMOCT00000004850	-	1113	XM_005356546	ENSMOCP00000004393	370 (aa)	XP_005356603	UPI00038BED34

Gene Model

Click here to download ENSMOCG00000003613's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000003613's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000003613	Fam172a	100	94.054	ENSG00000113391	FAM172A	100	96.203	Homo_sapiens
ENSMOCG00000003613	Fam172a	100	85.946	ENSAPLG00000004055	FAM172A	89	85.946	Anas_platyrhynchos
ENSMOCG00000003613	Fam172a	61	38.095	ENSAPLG00000011555	-	97	38.095	Anas_platyrhynchos
ENSMOCG00000003613	Fam172a	90	86.446	ENSACAG00000013305	FAM172A	86	86.446	Anolis_carolinensis
ENSMOCG00000003613	Fam172a	92	85.546	ENSANAG00000035869	FAM172A	93	95.455	Aotus_nancymaae
ENSMOCG00000003613	Fam172a	100	95.135	ENSBTAG00000050195	FAM172A	89	95.135	Bos_taurus
ENSMOCG00000003613	Fam172a	100	94.595	ENSCJAG00000010444	FAM172A	89	94.595	Callithrix_jacchus
ENSMOCG00000003613	Fam172a	88	95.988	ENSCAFG00000008064	FAM172A	87	95.988	Canis_familiaris
ENSMOCG00000003613	Fam172a	100	94.595	ENSCAFG00020006210	FAM172A	94	95.437	Canis_lupus_dingo
ENSMOCG00000003613	Fam172a	100	95.135	ENSCHIG00000008440	FAM172A	89	95.135	Capra_hircus
ENSMOCG00000003613	Fam172a	72	95.113	ENSTSYG00000006286	FAM172A	85	95.113	Carlito_syrichta
ENSMOCG00000003613	Fam172a	61	88.496	ENSCAPG00000014103	-	100	88.496	Cavia_aperea
ENSMOCG00000003613	Fam172a	100	94.054	ENSCCAG00000023116	FAM172A	100	94.054	Cebus_capucinus
ENSMOCG00000003613	Fam172a	100	86.216	ENSCLAG00000005472	FAM172A	100	96.203	Chinchilla_lanigera
ENSMOCG00000003613	Fam172a	97	43.360	ENSCPBG00000004402	-	96	43.360	Chrysemys_picta_bellii
ENSMOCG00000003613	Fam172a	73	94.074	ENSCANG00000040412	FAM172A	92	94.074	Colobus_angolensis_palliatus
ENSMOCG00000003613	Fam172a	100	94.865	ENSDNOG00000004689	FAM172A	89	94.865	Dasypus_novemcinctus
ENSMOCG00000003613	Fam172a	73	94.815	ENSDORG00000013558	Fam172a	88	94.815	Dipodomys_ordii
ENSMOCG00000003613	Fam172a	89	40.303	ENSEBUG00000016097	-	62	40.303	Eptatretus_burgeri
ENSMOCG00000003613	Fam172a	100	91.622	ENSECAG00000018274	FAM172A	89	91.622	Equus_caballus
ENSMOCG00000003613	Fam172a	91	92.537	ENSEEUG00000002887	FAM172A	80	92.537	Erinaceus_europaeus
ENSMOCG00000003613	Fam172a	99	68.097	ENSELUG00000017647	fam172a	88	68.097	Esox_lucius
ENSMOCG00000003613	Fam172a	100	95.405	ENSFCAG00000025443	FAM172A	89	95.405	Felis_catus
ENSMOCG00000003613	Fam172a	96	43.454	ENSFALG00000006501	-	100	43.454	Ficedula_albicollis
ENSMOCG00000003613	Fam172a	88	87.385	ENSFALG00000009072	FAM172A	87	87.385	Ficedula_albicollis
ENSMOCG00000003613	Fam172a	100	86.486	ENSGALG00000014661	FAM172A	89	86.486	Gallus_gallus
ENSMOCG00000003613	Fam172a	94	44.476	ENSGAGG00000022828	-	93	44.476	Gopherus_agassizii
ENSMOCG00000003613	Fam172a	100	88.649	ENSGAGG00000003839	FAM172A	89	88.649	Gopherus_agassizii
ENSMOCG00000003613	Fam172a	100	94.324	ENSGGOG00000010296	FAM172A	92	94.074	Gorilla_gorilla
ENSMOCG00000003613	Fam172a	100	92.432	ENSHGLG00000011178	FAM172A	100	94.937	Heterocephalus_glaber_female
ENSMOCG00000003613	Fam172a	87	94.737	ENSHGLG00100013340	FAM172A	100	94.937	Heterocephalus_glaber_male
ENSMOCG00000003613	Fam172a	100	95.135	ENSSTOG00000009918	FAM172A	89	95.135	Ictidomys_tridecemlineatus
ENSMOCG00000003613	Fam172a	96	48.732	ENSLACG00000001532	si:ch73-41e3.7	93	48.732	Latimeria_chalumnae
ENSMOCG00000003613	Fam172a	100	74.799	ENSLOCG00000001629	fam172a	89	75.603	Lepisosteus_oculatus
ENSMOCG00000003613	Fam172a	73	94.074	ENSMFAG00000001171	FAM172A	92	94.074	Macaca_fascicularis
ENSMOCG00000003613	Fam172a	100	94.324	ENSMNEG00000039938	FAM172A	92	94.074	Macaca_nemestrina
ENSMOCG00000003613	Fam172a	100	95.405	ENSMICG00000030403	FAM172A	89	95.405	Microcebus_murinus
ENSMOCG00000003613	Fam172a	100	88.108	ENSMODG00000020131	FAM172A	89	88.108	Monodelphis_domestica
ENSMOCG00000003613	Fam172a	84	93.671	MGP_PahariEiJ_G0015818	Fam172a	100	93.671	Mus_pahari
ENSMOCG00000003613	Fam172a	100	95.946	ENSNGAG00000019570	Fam172a	100	95.946	Nannospalax_galili
ENSMOCG00000003613	Fam172a	73	94.074	ENSNLEG00000013903	FAM172A	89	94.074	Nomascus_leucogenys
ENSMOCG00000003613	Fam172a	88	89.506	ENSOANG00000011068	FAM172A	87	89.506	Ornithorhynchus_anatinus
ENSMOCG00000003613	Fam172a	97	94.150	ENSOCUG00000007299	FAM172A	85	94.150	Oryctolagus_cuniculus
ENSMOCG00000003613	Fam172a	100	92.703	ENSOGAG00000015189	FAM172A	89	92.703	Otolemur_garnettii
ENSMOCG00000003613	Fam172a	91	92.285	ENSOARG00000016711	FAM172A	77	92.285	Ovis_aries
ENSMOCG00000003613	Fam172a	73	94.444	ENSPPAG00000030542	FAM172A	92	94.444	Pan_paniscus
ENSMOCG00000003613	Fam172a	100	95.405	ENSPPRG00000006653	FAM172A	89	95.405	Panthera_pardus
ENSMOCG00000003613	Fam172a	100	95.405	ENSPTIG00000012681	FAM172A	89	95.405	Panthera_tigris_altaica
ENSMOCG00000003613	Fam172a	73	94.444	ENSPTRG00000017074	FAM172A	92	94.444	Pan_troglodytes
ENSMOCG00000003613	Fam172a	73	94.074	ENSPANG00000011687	FAM172A	92	94.074	Papio_anubis
ENSMOCG00000003613	Fam172a	97	74.722	ENSPKIG00000012314	fam172a	87	91.228	Paramormyrops_kingsleyae
ENSMOCG00000003613	Fam172a	100	97.027	ENSPEMG00000009604	-	100	98.734	Peromyscus_maniculatus_bairdii
ENSMOCG00000003613	Fam172a	100	88.108	ENSPCIG00000028612	FAM172A	89	88.108	Phascolarctos_cinereus
ENSMOCG00000003613	Fam172a	62	92.576	ENSPCOG00000024072	FAM172A	93	92.576	Propithecus_coquereli
ENSMOCG00000003613	Fam172a	73	95.167	ENSRNOG00000013844	Fam172a	99	95.167	Rattus_norvegicus
ENSMOCG00000003613	Fam172a	73	94.074	ENSRROG00000023807	FAM172A	92	94.074	Rhinopithecus_roxellana
ENSMOCG00000003613	Fam172a	100	94.324	ENSSBOG00000019860	FAM172A	89	94.324	Saimiri_boliviensis_boliviensis
ENSMOCG00000003613	Fam172a	100	88.108	ENSSHAG00000013743	FAM172A	89	88.108	Sarcophilus_harrisii
ENSMOCG00000003613	Fam172a	100	85.405	ENSSPUG00000008161	FAM172A	89	85.405	Sphenodon_punctatus
ENSMOCG00000003613	Fam172a	100	95.135	ENSSSCG00000027608	FAM172A	100	95.135	Sus_scrofa
ENSMOCG00000003613	Fam172a	100	84.595	ENSTGUG00000000715	FAM172A	97	84.595	Taeniopygia_guttata
ENSMOCG00000003613	Fam172a	90	46.429	ENSTGUG00000013623	-	100	46.429	Taeniopygia_guttata
ENSMOCG00000003613	Fam172a	81	55.921	ENSTNIG00000009902	fam172a	92	57.843	Tetraodon_nigroviridis
ENSMOCG00000003613	Fam172a	100	91.892	ENSTTRG00000001521	FAM172A	89	91.892	Tursiops_truncatus
ENSMOCG00000003613	Fam172a	100	95.135	ENSUMAG00000005442	FAM172A	89	95.135	Ursus_maritimus
ENSMOCG00000003613	Fam172a	100	94.595	ENSVVUG00000022112	FAM172A	89	94.595	Vulpes_vulpes
ENSMOCG00000003613	Fam172a	96	45.429	ENSXETG00000033027	-	93	45.429	Xenopus_tropicalis
ENSMOCG00000003613	Fam172a	100	79.515	ENSXETG00000011592	fam172a	88	79.515	Xenopus_tropicalis