EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000004128 (Gene tree)
Gene ID: 101987092
Gene Symbol: Tarbp1
Alias: Gm17296
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 50476 bases
Position: chr4:34068584-34119059
Accession: 101987092
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000004799	SpoU_methylase	PF00588.19	9.1e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000005471	-	5358	XM_005345899	ENSMOCP00000004799	1579 (aa)	XP_005345956	UPI00038BD6EA

Gene Model

Click here to download ENSMOCG00000004128's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000004128's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000004128	Tarbp1	99	73.824	ENSG00000059588	TARBP1	99	73.700	Homo_sapiens
ENSMOCG00000004128	Tarbp1	87	44.194	ENSAPOG00000016419	si:dkey-85a20.4	85	44.194	Acanthochromis_polyacanthus
ENSMOCG00000004128	Tarbp1	86	75.991	ENSAMEG00000003359	TARBP1	99	75.991	Ailuropoda_melanoleuca
ENSMOCG00000004128	Tarbp1	92	43.103	ENSATEG00000020266	si:dkey-85a20.4	90	43.170	Anabas_testudineus
ENSMOCG00000004128	Tarbp1	85	61.713	ENSAPLG00000007666	TARBP1	99	62.376	Anas_platyrhynchos
ENSMOCG00000004128	Tarbp1	98	54.488	ENSACAG00000001142	TARBP1	98	54.930	Anolis_carolinensis
ENSMOCG00000004128	Tarbp1	93	73.129	ENSANAG00000022031	TARBP1	99	68.847	Aotus_nancymaae
ENSMOCG00000004128	Tarbp1	99	72.020	ENSBTAG00000004517	TARBP1	99	77.344	Bos_taurus
ENSMOCG00000004128	Tarbp1	99	72.851	ENSCJAG00000018155	TARBP1	99	72.789	Callithrix_jacchus
ENSMOCG00000004128	Tarbp1	90	74.160	ENSCAFG00000011533	TARBP1	99	74.663	Canis_familiaris
ENSMOCG00000004128	Tarbp1	99	71.552	ENSCAFG00020027141	TARBP1	99	72.109	Canis_lupus_dingo
ENSMOCG00000004128	Tarbp1	99	71.147	ENSCHIG00000011437	TARBP1	99	71.393	Capra_hircus
ENSMOCG00000004128	Tarbp1	82	75.613	ENSTSYG00000010382	TARBP1	96	75.613	Carlito_syrichta
ENSMOCG00000004128	Tarbp1	81	68.779	ENSCAPG00000010831	TARBP1	100	68.779	Cavia_aperea
ENSMOCG00000004128	Tarbp1	99	73.711	ENSCPOG00000013995	TARBP1	99	74.465	Cavia_porcellus
ENSMOCG00000004128	Tarbp1	99	73.391	ENSCCAG00000037278	TARBP1	99	73.391	Cebus_capucinus
ENSMOCG00000004128	Tarbp1	99	73.160	ENSCATG00000011754	TARBP1	99	73.346	Cercocebus_atys
ENSMOCG00000004128	Tarbp1	85	77.710	ENSCLAG00000003655	TARBP1	99	77.710	Chinchilla_lanigera
ENSMOCG00000004128	Tarbp1	81	76.484	ENSCSAG00000010100	TARBP1	99	76.484	Chlorocebus_sabaeus
ENSMOCG00000004128	Tarbp1	94	61.267	ENSCPBG00000005587	TARBP1	98	61.467	Chrysemys_picta_bellii
ENSMOCG00000004128	Tarbp1	86	76.866	ENSCANG00000034343	TARBP1	99	76.866	Colobus_angolensis_palliatus
ENSMOCG00000004128	Tarbp1	100	90.570	ENSCGRG00001016690	Tarbp1	100	90.570	Cricetulus_griseus_chok1gshd
ENSMOCG00000004128	Tarbp1	98	90.063	ENSCGRG00000016893	Tarbp1	100	90.063	Cricetulus_griseus_crigri
ENSMOCG00000004128	Tarbp1	99	39.301	ENSCSEG00000005255	si:dkey-85a20.4	99	44.915	Cynoglossus_semilaevis
ENSMOCG00000004128	Tarbp1	99	42.583	ENSDARG00000079055	si:dkey-85a20.4	99	54.983	Danio_rerio
ENSMOCG00000004128	Tarbp1	99	70.206	ENSDNOG00000008637	TARBP1	99	70.449	Dasypus_novemcinctus
ENSMOCG00000004128	Tarbp1	82	74.575	ENSDORG00000007984	Tarbp1	100	74.575	Dipodomys_ordii
ENSMOCG00000004128	Tarbp1	99	74.159	ENSEASG00005000252	TARBP1	99	74.408	Equus_asinus_asinus
ENSMOCG00000004128	Tarbp1	99	73.671	ENSECAG00000023673	TARBP1	99	75.771	Equus_caballus
ENSMOCG00000004128	Tarbp1	87	44.499	ENSELUG00000012193	si:dkey-85a20.4	86	44.499	Esox_lucius
ENSMOCG00000004128	Tarbp1	99	69.981	ENSFCAG00000014183	TARBP1	99	70.229	Felis_catus
ENSMOCG00000004128	Tarbp1	82	62.912	ENSFALG00000013565	TARBP1	99	62.872	Ficedula_albicollis
ENSMOCG00000004128	Tarbp1	81	73.837	ENSFDAG00000001308	TARBP1	100	73.913	Fukomys_damarensis
ENSMOCG00000004128	Tarbp1	99	36.632	ENSFHEG00000007565	si:dkey-85a20.4	77	55.000	Fundulus_heteroclitus
ENSMOCG00000004128	Tarbp1	85	44.380	ENSGMOG00000004549	si:dkey-85a20.4	98	44.380	Gadus_morhua
ENSMOCG00000004128	Tarbp1	99	54.984	ENSGALG00000011000	TARBP1	99	55.250	Gallus_gallus
ENSMOCG00000004128	Tarbp1	87	43.559	ENSGAFG00000007387	si:dkey-85a20.4	85	43.559	Gambusia_affinis
ENSMOCG00000004128	Tarbp1	87	44.202	ENSGACG00000005865	si:dkey-85a20.4	99	44.273	Gasterosteus_aculeatus
ENSMOCG00000004128	Tarbp1	99	62.186	ENSGAGG00000012102	TARBP1	99	62.524	Gopherus_agassizii
ENSMOCG00000004128	Tarbp1	86	74.781	ENSGGOG00000022879	TARBP1	99	74.781	Gorilla_gorilla
ENSMOCG00000004128	Tarbp1	88	44.866	ENSHBUG00000008877	si:dkey-85a20.4	85	44.866	Haplochromis_burtoni
ENSMOCG00000004128	Tarbp1	99	74.311	ENSHGLG00000011592	TARBP1	100	74.937	Heterocephalus_glaber_female
ENSMOCG00000004128	Tarbp1	98	74.619	ENSHGLG00100015169	TARBP1	100	74.481	Heterocephalus_glaber_male
ENSMOCG00000004128	Tarbp1	87	41.981	ENSIPUG00000005249	si:dkey-85a20.4	83	42.151	Ictalurus_punctatus
ENSMOCG00000004128	Tarbp1	89	74.537	ENSSTOG00000032291	TARBP1	99	74.685	Ictidomys_tridecemlineatus
ENSMOCG00000004128	Tarbp1	95	75.089	ENSJJAG00000017840	Tarbp1	99	75.089	Jaculus_jaculus
ENSMOCG00000004128	Tarbp1	78	46.854	ENSKMAG00000017546	si:dkey-85a20.4	82	46.854	Kryptolebias_marmoratus
ENSMOCG00000004128	Tarbp1	68	48.681	ENSLBEG00000012132	si:dkey-85a20.4	87	48.681	Labrus_bergylta
ENSMOCG00000004128	Tarbp1	99	49.113	ENSLACG00000004337	TARBP1	99	49.143	Latimeria_chalumnae
ENSMOCG00000004128	Tarbp1	99	44.661	ENSLOCG00000016214	si:dkey-85a20.4	85	48.890	Lepisosteus_oculatus
ENSMOCG00000004128	Tarbp1	96	70.495	ENSLAFG00000011394	TARBP1	99	71.256	Loxodonta_africana
ENSMOCG00000004128	Tarbp1	99	71.902	ENSMFAG00000041068	TARBP1	99	71.965	Macaca_fascicularis
ENSMOCG00000004128	Tarbp1	99	71.279	ENSMMUG00000021703	TARBP1	99	71.279	Macaca_mulatta
ENSMOCG00000004128	Tarbp1	99	73.469	ENSMNEG00000045002	TARBP1	99	73.469	Macaca_nemestrina
ENSMOCG00000004128	Tarbp1	85	76.593	ENSMLEG00000044182	TARBP1	99	76.593	Mandrillus_leucophaeus
ENSMOCG00000004128	Tarbp1	93	43.140	ENSMAMG00000021760	si:dkey-85a20.4	93	43.140	Mastacembelus_armatus
ENSMOCG00000004128	Tarbp1	88	44.866	ENSMZEG00005005751	si:dkey-85a20.4	85	44.866	Maylandia_zebra
ENSMOCG00000004128	Tarbp1	100	89.747	ENSMAUG00000020968	Tarbp1	100	89.747	Mesocricetus_auratus
ENSMOCG00000004128	Tarbp1	99	66.378	ENSMICG00000015280	TARBP1	99	66.996	Microcebus_murinus
ENSMOCG00000004128	Tarbp1	87	43.484	ENSMMOG00000007795	si:dkey-85a20.4	85	43.555	Mola_mola
ENSMOCG00000004128	Tarbp1	99	63.923	ENSMODG00000008504	TARBP1	99	63.879	Monodelphis_domestica
ENSMOCG00000004128	Tarbp1	87	44.092	ENSMALG00000002916	si:dkey-85a20.4	85	44.086	Monopterus_albus
ENSMOCG00000004128	Tarbp1	100	87.017	MGP_CAROLIEiJ_G0031729	Tarbp1	100	87.017	Mus_caroli
ENSMOCG00000004128	Tarbp1	100	86.637	ENSMUSG00000090290	Tarbp1	100	86.637	Mus_musculus
ENSMOCG00000004128	Tarbp1	100	87.097	MGP_PahariEiJ_G0023326	Tarbp1	100	87.097	Mus_pahari
ENSMOCG00000004128	Tarbp1	99	86.849	MGP_SPRETEiJ_G0032846	Tarbp1	99	86.849	Mus_spretus
ENSMOCG00000004128	Tarbp1	79	74.378	ENSMPUG00000002802	TARBP1	100	74.378	Mustela_putorius_furo
ENSMOCG00000004128	Tarbp1	85	71.565	ENSMLUG00000002414	TARBP1	99	71.838	Myotis_lucifugus
ENSMOCG00000004128	Tarbp1	99	73.717	ENSNLEG00000002518	TARBP1	99	73.593	Nomascus_leucogenys
ENSMOCG00000004128	Tarbp1	66	71.674	ENSMEUG00000011370	-	67	71.674	Notamacropus_eugenii
ENSMOCG00000004128	Tarbp1	72	79.407	ENSOPRG00000013822	TARBP1	71	79.407	Ochotona_princeps
ENSMOCG00000004128	Tarbp1	99	72.521	ENSODEG00000005238	TARBP1	100	72.521	Octodon_degus
ENSMOCG00000004128	Tarbp1	87	44.845	ENSONIG00000009789	si:dkey-85a20.4	99	44.915	Oreochromis_niloticus
ENSMOCG00000004128	Tarbp1	99	73.144	ENSOCUG00000017418	TARBP1	99	73.205	Oryctolagus_cuniculus
ENSMOCG00000004128	Tarbp1	87	43.777	ENSORLG00000010529	si:dkey-85a20.4	85	43.777	Oryzias_latipes
ENSMOCG00000004128	Tarbp1	87	43.847	ENSORLG00020019264	si:dkey-85a20.4	85	43.777	Oryzias_latipes_hni
ENSMOCG00000004128	Tarbp1	87	43.604	ENSORLG00015003276	si:dkey-85a20.4	85	43.534	Oryzias_latipes_hsok
ENSMOCG00000004128	Tarbp1	99	71.004	ENSOGAG00000002379	TARBP1	99	71.004	Otolemur_garnettii
ENSMOCG00000004128	Tarbp1	92	73.581	ENSOARG00000003434	TARBP1	95	73.464	Ovis_aries
ENSMOCG00000004128	Tarbp1	86	77.320	ENSPPAG00000028097	TARBP1	99	77.320	Pan_paniscus
ENSMOCG00000004128	Tarbp1	99	66.895	ENSPPRG00000013561	TARBP1	99	66.894	Panthera_pardus
ENSMOCG00000004128	Tarbp1	85	75.859	ENSPTIG00000009281	TARBP1	99	75.859	Panthera_tigris_altaica
ENSMOCG00000004128	Tarbp1	99	73.687	ENSPTRG00000002124	TARBP1	99	73.564	Pan_troglodytes
ENSMOCG00000004128	Tarbp1	99	73.655	ENSPANG00000021933	TARBP1	99	73.655	Papio_anubis
ENSMOCG00000004128	Tarbp1	87	46.742	ENSPKIG00000016716	si:dkey-85a20.4	84	46.742	Paramormyrops_kingsleyae
ENSMOCG00000004128	Tarbp1	81	64.614	ENSPSIG00000010699	TARBP1	99	64.614	Pelodiscus_sinensis
ENSMOCG00000004128	Tarbp1	97	89.643	ENSPEMG00000006888	Tarbp1	100	89.643	Peromyscus_maniculatus_bairdii
ENSMOCG00000004128	Tarbp1	90	80.500	ENSPCIG00000029710	TARBP1	98	80.500	Phascolarctos_cinereus
ENSMOCG00000004128	Tarbp1	87	43.821	ENSPFOG00000013020	si:dkey-85a20.4	99	43.972	Poecilia_formosa
ENSMOCG00000004128	Tarbp1	87	43.852	ENSPLAG00000006044	si:dkey-85a20.4	85	44.003	Poecilia_latipinna
ENSMOCG00000004128	Tarbp1	87	43.639	ENSPMEG00000017857	si:dkey-85a20.4	85	43.790	Poecilia_mexicana
ENSMOCG00000004128	Tarbp1	87	44.168	ENSPREG00000022753	si:dkey-85a20.4	85	44.318	Poecilia_reticulata
ENSMOCG00000004128	Tarbp1	91	75.313	ENSPPYG00000000102	TARBP1	99	76.156	Pongo_abelii
ENSMOCG00000004128	Tarbp1	85	87.162	ENSPCAG00000004808	TARBP1	85	87.162	Procavia_capensis
ENSMOCG00000004128	Tarbp1	99	70.836	ENSPCOG00000005666	TARBP1	99	71.146	Propithecus_coquereli
ENSMOCG00000004128	Tarbp1	99	60.810	ENSPVAG00000014798	TARBP1	99	61.620	Pteropus_vampyrus
ENSMOCG00000004128	Tarbp1	88	44.382	ENSPNYG00000019135	si:dkey-85a20.4	85	44.382	Pundamilia_nyererei
ENSMOCG00000004128	Tarbp1	100	82.901	ENSRNOG00000053574	Tarbp1	100	82.901	Rattus_norvegicus
ENSMOCG00000004128	Tarbp1	95	70.223	ENSRBIG00000043362	TARBP1	99	81.818	Rhinopithecus_bieti
ENSMOCG00000004128	Tarbp1	99	71.902	ENSRROG00000029527	TARBP1	99	71.840	Rhinopithecus_roxellana
ENSMOCG00000004128	Tarbp1	91	75.179	ENSSBOG00000034503	TARBP1	99	77.778	Saimiri_boliviensis_boliviensis
ENSMOCG00000004128	Tarbp1	85	68.718	ENSSHAG00000000013	TARBP1	99	68.718	Sarcophilus_harrisii
ENSMOCG00000004128	Tarbp1	85	45.349	ENSSFOG00015002660	si:dkey-85a20.4	97	46.131	Scleropages_formosus
ENSMOCG00000004128	Tarbp1	86	44.835	ENSSMAG00000007081	si:dkey-85a20.4	82	44.835	Scophthalmus_maximus
ENSMOCG00000004128	Tarbp1	87	43.410	ENSSDUG00000023566	si:dkey-85a20.4	85	43.410	Seriola_dumerili
ENSMOCG00000004128	Tarbp1	87	44.382	ENSSLDG00000020200	si:dkey-85a20.4	86	44.696	Seriola_lalandi_dorsalis
ENSMOCG00000004128	Tarbp1	89	77.855	ENSSARG00000012207	TARBP1	89	77.855	Sorex_araneus
ENSMOCG00000004128	Tarbp1	99	59.615	ENSSPUG00000015364	TARBP1	99	59.567	Sphenodon_punctatus
ENSMOCG00000004128	Tarbp1	92	43.037	ENSSPAG00000007213	si:dkey-85a20.4	90	43.037	Stegastes_partitus
ENSMOCG00000004128	Tarbp1	99	73.189	ENSSSCG00000010160	TARBP1	99	74.775	Sus_scrofa
ENSMOCG00000004128	Tarbp1	82	62.691	ENSTGUG00000010214	TARBP1	100	62.691	Taeniopygia_guttata
ENSMOCG00000004128	Tarbp1	94	39.385	ENSTNIG00000016586	si:dkey-85a20.4	99	43.497	Tetraodon_nigroviridis
ENSMOCG00000004128	Tarbp1	92	71.243	ENSTTRG00000008707	TARBP1	96	71.243	Tursiops_truncatus
ENSMOCG00000004128	Tarbp1	84	76.021	ENSUMAG00000006730	TARBP1	99	76.021	Ursus_maritimus
ENSMOCG00000004128	Tarbp1	81	84.158	ENSVPAG00000007665	TARBP1	87	84.158	Vicugna_pacos
ENSMOCG00000004128	Tarbp1	88	74.569	ENSVVUG00000007460	TARBP1	99	74.912	Vulpes_vulpes
ENSMOCG00000004128	Tarbp1	85	52.971	ENSXETG00000016224	tarbp1	99	52.971	Xenopus_tropicalis
ENSMOCG00000004128	Tarbp1	80	47.690	ENSXCOG00000011779	si:dkey-85a20.4	93	47.891	Xiphophorus_couchianus
ENSMOCG00000004128	Tarbp1	66	41.963	ENSXMAG00000009600	si:dkey-85a20.4	100	41.893	Xiphophorus_maculatus