EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000004478 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: growth factor independent 1 transcriptional repressor
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 8288 bases
Position: chrLG1:57058660-57066947
Accession: 102002305
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000005067	zf-C2H2	PF00096.26	5e-25	1	4
ENSMOCP00000005067	zf-C2H2	PF00096.26	5e-25	2	4
ENSMOCP00000005067	zf-C2H2	PF00096.26	5e-25	3	4
ENSMOCP00000005067	zf-C2H2	PF00096.26	5e-25	4	4
ENSMOCP00000005067	zf-met	PF12874.7	1.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000005877	-	1389	XM_005359648	ENSMOCP00000005067	135 (aa)	XP_005359705	UPI0000ECFA75

Gene Model

Click here to download ENSMOCG00000004478's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000004478's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000004478	-	100	45.455	ENSMOCG00000002761	Zfp1	61	45.455
ENSMOCG00000004478	-	99	47.222	ENSMOCG00000001762	-	66	47.222
ENSMOCG00000004478	-	100	47.368	ENSMOCG00000004895	Zfp64	60	40.217
ENSMOCG00000004478	-	100	45.522	ENSMOCG00000002167	Zfp712	89	45.522
ENSMOCG00000004478	-	100	49.606	ENSMOCG00000017799	-	63	49.606
ENSMOCG00000004478	-	100	48.507	ENSMOCG00000021383	Zfp251	65	48.507
ENSMOCG00000004478	-	100	34.848	ENSMOCG00000003536	Snai3	55	34.848
ENSMOCG00000004478	-	100	39.535	ENSMOCG00000005503	Zfp319	86	39.535
ENSMOCG00000004478	-	99	46.212	ENSMOCG00000020165	Zfp101	65	46.212
ENSMOCG00000004478	-	100	42.857	ENSMOCG00000014774	Zfp961	69	42.857
ENSMOCG00000004478	-	100	44.444	ENSMOCG00000009299	Zfp784	65	44.444
ENSMOCG00000004478	-	100	48.819	ENSMOCG00000003692	Zfp354a	70	48.819
ENSMOCG00000004478	-	100	44.531	ENSMOCG00000017127	-	81	44.531
ENSMOCG00000004478	-	100	46.667	ENSMOCG00000007908	Zfp560	67	48.889
ENSMOCG00000004478	-	100	37.594	ENSMOCG00000006622	Snai2	52	37.594
ENSMOCG00000004478	-	100	46.739	ENSMOCG00000022870	Zfp236	54	46.739
ENSMOCG00000004478	-	99	41.322	ENSMOCG00000007851	-	67	41.322
ENSMOCG00000004478	-	100	44.037	ENSMOCG00000000804	Zfp317	66	44.037
ENSMOCG00000004478	-	100	43.284	ENSMOCG00000017961	Zfp39	60	43.284
ENSMOCG00000004478	-	100	43.182	ENSMOCG00000006946	Zfp53	79	43.284
ENSMOCG00000004478	-	99	45.570	ENSMOCG00000016268	Zfp574	52	43.478
ENSMOCG00000004478	-	99	50.000	ENSMOCG00000021124	Repin1	81	47.287
ENSMOCG00000004478	-	100	47.059	ENSMOCG00000007791	-	69	47.059
ENSMOCG00000004478	-	100	50.000	ENSMOCG00000000365	-	73	50.000
ENSMOCG00000004478	-	99	45.133	ENSMOCG00000016267	Prdm5	74	43.846
ENSMOCG00000004478	-	100	50.746	ENSMOCG00000015724	Zfp26	77	50.746
ENSMOCG00000004478	-	100	45.238	ENSMOCG00000003394	-	67	45.238

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000004478	-	100	100.000	ENSAMEG00000013858	-	92	100.000	Ailuropoda_melanoleuca
ENSMOCG00000004478	-	99	72.388	ENSACIG00000002180	-	99	72.388	Amphilophus_citrinellus
ENSMOCG00000004478	-	100	100.000	ENSAPLG00000015700	GFI1	50	100.000	Anas_platyrhynchos
ENSMOCG00000004478	-	84	82.143	ENSACLG00000001258	-	91	82.143	Astatotilapia_calliptera
ENSMOCG00000004478	-	99	93.284	ENSAMXG00000006669	GFI1	54	93.284	Astyanax_mexicanus
ENSMOCG00000004478	-	82	82.883	ENSAMXG00000015228	-	51	82.883	Astyanax_mexicanus
ENSMOCG00000004478	-	84	100.000	ENSCAPG00000016268	-	100	100.000	Cavia_aperea
ENSMOCG00000004478	-	100	99.259	ENSCPBG00000015742	-	100	99.259	Chrysemys_picta_bellii
ENSMOCG00000004478	-	99	78.358	ENSCING00000011342	-	71	78.358	Ciona_intestinalis
ENSMOCG00000004478	-	100	79.259	ENSCSAVG00000005904	-	83	79.259	Ciona_savignyi
ENSMOCG00000004478	-	100	100.000	ENSCGRG00000013485	-	100	100.000	Cricetulus_griseus_crigri
ENSMOCG00000004478	-	100	100.000	ENSDORG00000023443	-	100	100.000	Dipodomys_ordii
ENSMOCG00000004478	-	100	100.000	ENSFDAG00000019296	-	100	100.000	Fukomys_damarensis
ENSMOCG00000004478	-	100	99.259	ENSGAGG00000015899	GFI1	100	99.259	Gopherus_agassizii
ENSMOCG00000004478	-	100	96.296	ENSIPUG00000013414	GFI1	56	96.296	Ictalurus_punctatus
ENSMOCG00000004478	-	82	81.982	ENSIPUG00000021407	-	52	81.982	Ictalurus_punctatus
ENSMOCG00000004478	-	84	100.000	ENSJJAG00000022622	-	100	100.000	Jaculus_jaculus
ENSMOCG00000004478	-	100	100.000	ENSMMUG00000005068	GFI1	100	100.000	Macaca_mulatta
ENSMOCG00000004478	-	100	100.000	ENSMAUG00000021273	-	100	100.000	Mesocricetus_auratus
ENSMOCG00000004478	-	100	95.556	ENSMMOG00000005556	gfi1ab	62	95.556	Mola_mola
ENSMOCG00000004478	-	100	100.000	MGP_CAROLIEiJ_G0027508	Gfi1	100	100.000	Mus_caroli
ENSMOCG00000004478	-	100	100.000	MGP_PahariEiJ_G0017280	Gfi1	100	100.000	Mus_pahari
ENSMOCG00000004478	-	100	100.000	ENSNGAG00000002549	-	100	100.000	Nannospalax_galili
ENSMOCG00000004478	-	84	78.761	ENSNBRG00000001834	-	94	78.761	Neolamprologus_brichardi
ENSMOCG00000004478	-	84	80.531	ENSNBRG00000010351	-	88	80.531	Neolamprologus_brichardi
ENSMOCG00000004478	-	100	100.000	ENSODEG00000006410	-	100	100.000	Octodon_degus
ENSMOCG00000004478	-	100	98.519	ENSOANG00000022289	-	72	98.519	Ornithorhynchus_anatinus
ENSMOCG00000004478	-	99	88.722	ENSPTIG00000002680	-	99	88.722	Panthera_tigris_altaica
ENSMOCG00000004478	-	100	97.778	ENSPMGG00000012546	gfi1ab	73	97.778	Periophthalmus_magnuspinnatus
ENSMOCG00000004478	-	100	97.778	ENSPLAG00000010879	gfi1ab	55	97.778	Poecilia_latipinna
ENSMOCG00000004478	-	83	82.143	ENSPNYG00000001775	-	88	82.143	Pundamilia_nyererei
ENSMOCG00000004478	-	81	82.727	ENSPNAG00000014299	-	54	82.727	Pygocentrus_nattereri
ENSMOCG00000004478	-	96	71.756	ENSSLDG00000017614	-	95	71.756	Seriola_lalandi_dorsalis
ENSMOCG00000004478	-	100	97.778	ENSSPAG00000009140	gfi1ab	58	97.778	Stegastes_partitus
ENSMOCG00000004478	-	100	100.000	ENSTGUG00000006060	GFI1	58	100.000	Taeniopygia_guttata
ENSMOCG00000004478	-	100	100.000	ENSUMAG00000011251	-	100	100.000	Ursus_maritimus
ENSMOCG00000004478	-	83	92.857	ENSXCOG00000009186	-	90	92.857	Xiphophorus_couchianus
ENSMOCG00000004478	-	96	64.667	ENSXMAG00000006527	-	50	64.667	Xiphophorus_maculatus