EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000004848 (Gene tree)
Gene ID: 101981171
Gene Symbol: Chd3
Alias: 2600010P09Rik|Chd7|Mi-2 alpha|Prp7|Prp9-1
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 20858 bases
Position: chr7:29427065-29447922
Accession: 101981171
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000005428	ResIII	PF04851.15	1.8e-08	1	1
ENSMOCP00000005425	ResIII	PF04851.15	1.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000006424	-	5787	-	ENSMOCP00000005428	1928 (aa)	-	-
ENSMOCT00000006420	-	5892	XM_013347244	ENSMOCP00000005425	1963 (aa)	XP_013202698	-

Gene Model

Click here to download ENSMOCG00000004848's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000004848's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000004848	Chd3	96	70.141	ENSMOCG00000011049	Chd5	97	70.266
ENSMOCG00000004848	Chd3	91	70.971	ENSMOCG00000020624	Chd4	95	70.398

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000004848	Chd3	100	97.823	ENSG00000170004	CHD3	98	97.823	Homo_sapiens
ENSMOCG00000004848	Chd3	80	82.540	ENSAPOG00000005614	chd3	94	82.540	Acanthochromis_polyacanthus
ENSMOCG00000004848	Chd3	69	96.334	ENSAMEG00000003025	-	100	96.334	Ailuropoda_melanoleuca
ENSMOCG00000004848	Chd3	86	75.690	ENSACIG00000019671	chd3	99	82.011	Amphilophus_citrinellus
ENSMOCG00000004848	Chd3	93	80.205	ENSAOCG00000023784	chd3	97	81.771	Amphiprion_ocellaris
ENSMOCG00000004848	Chd3	93	79.522	ENSAPEG00000006341	chd3	96	72.821	Amphiprion_percula
ENSMOCG00000004848	Chd3	92	80.969	ENSATEG00000000848	chd3	99	74.092	Anabas_testudineus
ENSMOCG00000004848	Chd3	99	85.013	ENSACAG00000004276	CHD3	95	84.802	Anolis_carolinensis
ENSMOCG00000004848	Chd3	100	94.764	ENSANAG00000034323	CHD3	99	97.284	Aotus_nancymaae
ENSMOCG00000004848	Chd3	98	73.979	ENSACLG00000009222	chd3	99	73.927	Astatotilapia_calliptera
ENSMOCG00000004848	Chd3	100	96.997	ENSBTAG00000014377	CHD3	97	97.085	Bos_taurus
ENSMOCG00000004848	Chd3	100	97.719	ENSCJAG00000014766	CHD3	98	97.719	Callithrix_jacchus
ENSMOCG00000004848	Chd3	100	97.096	ENSCAFG00000016859	CHD3	98	97.096	Canis_familiaris
ENSMOCG00000004848	Chd3	96	97.016	ENSCAFG00020007422	CHD3	100	96.999	Canis_lupus_dingo
ENSMOCG00000004848	Chd3	100	97.301	ENSCHIG00000016737	CHD3	99	97.301	Capra_hircus
ENSMOCG00000004848	Chd3	100	97.719	ENSTSYG00000035658	CHD3	98	97.719	Carlito_syrichta
ENSMOCG00000004848	Chd3	100	94.756	ENSCAPG00000014864	CHD3	98	94.756	Cavia_aperea
ENSMOCG00000004848	Chd3	100	97.352	ENSCPOG00000022653	CHD3	98	97.352	Cavia_porcellus
ENSMOCG00000004848	Chd3	100	97.512	ENSCCAG00000034792	CHD3	98	97.352	Cebus_capucinus
ENSMOCG00000004848	Chd3	100	97.771	ENSCATG00000041717	CHD3	98	97.771	Cercocebus_atys
ENSMOCG00000004848	Chd3	100	97.667	ENSCLAG00000010523	CHD3	99	97.667	Chinchilla_lanigera
ENSMOCG00000004848	Chd3	100	97.352	ENSCSAG00000011122	CHD3	99	97.352	Chlorocebus_sabaeus
ENSMOCG00000004848	Chd3	91	83.759	ENSCPBG00000011966	CHD3	99	87.276	Chrysemys_picta_bellii
ENSMOCG00000004848	Chd3	100	97.667	ENSCANG00000037641	CHD3	98	97.667	Colobus_angolensis_palliatus
ENSMOCG00000004848	Chd3	100	99.170	ENSCGRG00001011306	Chd3	99	99.170	Cricetulus_griseus_chok1gshd
ENSMOCG00000004848	Chd3	94	100.000	ENSCGRG00000007878	Chd3	99	100.000	Cricetulus_griseus_crigri
ENSMOCG00000004848	Chd3	92	79.868	ENSCSEG00000004489	chd3	99	75.529	Cynoglossus_semilaevis
ENSMOCG00000004848	Chd3	94	74.342	ENSCVAG00000007293	chd3	95	82.072	Cyprinodon_variegatus
ENSMOCG00000004848	Chd3	95	76.627	ENSDARG00000021405	chd3	99	76.333	Danio_rerio
ENSMOCG00000004848	Chd3	100	82.210	ENSDNOG00000047846	CHD3	98	82.210	Dasypus_novemcinctus
ENSMOCG00000004848	Chd3	100	96.941	ENSDORG00000010713	Chd3	99	96.941	Dipodomys_ordii
ENSMOCG00000004848	Chd3	98	90.593	ENSETEG00000017733	CHD3	99	90.593	Echinops_telfairi
ENSMOCG00000004848	Chd3	76	69.949	ENSEBUG00000008310	chd3	99	70.479	Eptatretus_burgeri
ENSMOCG00000004848	Chd3	93	97.219	ENSEASG00005019360	CHD3	100	97.219	Equus_asinus_asinus
ENSMOCG00000004848	Chd3	93	97.219	ENSECAG00000010051	CHD3	100	97.219	Equus_caballus
ENSMOCG00000004848	Chd3	93	93.220	ENSEEUG00000015205	CHD3	93	93.220	Erinaceus_europaeus
ENSMOCG00000004848	Chd3	80	90.476	ENSELUG00000019499	chd3	99	90.476	Esox_lucius
ENSMOCG00000004848	Chd3	100	96.741	ENSFCAG00000009629	CHD3	95	96.741	Felis_catus
ENSMOCG00000004848	Chd3	100	94.756	ENSFDAG00000008220	CHD3	98	94.756	Fukomys_damarensis
ENSMOCG00000004848	Chd3	90	80.102	ENSGMOG00000013599	chd3	90	80.711	Gadus_morhua
ENSMOCG00000004848	Chd3	60	74.659	ENSGAFG00000004055	chd3	99	75.299	Gambusia_affinis
ENSMOCG00000004848	Chd3	99	70.692	ENSGACG00000019275	chd3	90	74.295	Gasterosteus_aculeatus
ENSMOCG00000004848	Chd3	76	86.558	ENSGAGG00000013164	CHD3	98	86.897	Gopherus_agassizii
ENSMOCG00000004848	Chd3	100	97.719	ENSGGOG00000013496	CHD3	98	97.719	Gorilla_gorilla
ENSMOCG00000004848	Chd3	100	97.615	ENSHGLG00000012017	CHD3	99	97.454	Heterocephalus_glaber_female
ENSMOCG00000004848	Chd3	89	89.787	ENSHGLG00100013902	CHD3	99	89.787	Heterocephalus_glaber_male
ENSMOCG00000004848	Chd3	95	72.010	ENSHCOG00000010170	chd3	96	72.389	Hippocampus_comes
ENSMOCG00000004848	Chd3	91	73.131	ENSIPUG00000003271	chd3	96	78.596	Ictalurus_punctatus
ENSMOCG00000004848	Chd3	100	97.460	ENSSTOG00000025907	CHD3	99	97.460	Ictidomys_tridecemlineatus
ENSMOCG00000004848	Chd3	100	96.993	ENSJJAG00000017633	Chd3	99	96.993	Jaculus_jaculus
ENSMOCG00000004848	Chd3	85	90.047	ENSKMAG00000019292	chd3	97	75.054	Kryptolebias_marmoratus
ENSMOCG00000004848	Chd3	97	70.285	ENSLBEG00000028485	chd3	93	75.899	Labrus_bergylta
ENSMOCG00000004848	Chd3	97	74.859	ENSLACG00000008031	CHD3	98	75.115	Latimeria_chalumnae
ENSMOCG00000004848	Chd3	98	76.734	ENSLOCG00000013965	chd3	97	77.102	Lepisosteus_oculatus
ENSMOCG00000004848	Chd3	96	93.362	ENSLAFG00000000572	CHD3	99	93.362	Loxodonta_africana
ENSMOCG00000004848	Chd3	100	97.823	ENSMFAG00000020113	CHD3	98	97.823	Macaca_fascicularis
ENSMOCG00000004848	Chd3	100	95.163	ENSMMUG00000022221	CHD3	98	95.163	Macaca_mulatta
ENSMOCG00000004848	Chd3	100	97.719	ENSMNEG00000001728	CHD3	99	96.889	Macaca_nemestrina
ENSMOCG00000004848	Chd3	100	97.771	ENSMLEG00000032249	CHD3	98	97.771	Mandrillus_leucophaeus
ENSMOCG00000004848	Chd3	86	76.781	ENSMAMG00000000564	chd3	99	76.544	Mastacembelus_armatus
ENSMOCG00000004848	Chd3	100	99.015	ENSMAUG00000013873	Chd3	99	96.499	Mesocricetus_auratus
ENSMOCG00000004848	Chd3	100	97.301	ENSMICG00000008741	CHD3	98	94.566	Microcebus_murinus
ENSMOCG00000004848	Chd3	96	74.427	ENSMMOG00000012699	chd3	99	73.899	Mola_mola
ENSMOCG00000004848	Chd3	93	93.837	ENSMODG00000007509	CHD3	100	93.948	Monodelphis_domestica
ENSMOCG00000004848	Chd3	100	98.290	MGP_CAROLIEiJ_G0016564	Chd3	100	98.408	Mus_caroli
ENSMOCG00000004848	Chd3	100	98.394	ENSMUSG00000018474	Chd3	99	98.515	Mus_musculus
ENSMOCG00000004848	Chd3	100	98.549	MGP_PahariEiJ_G0017695	Chd3	100	98.674	Mus_pahari
ENSMOCG00000004848	Chd3	100	98.394	MGP_SPRETEiJ_G0017400	Chd3	100	98.515	Mus_spretus
ENSMOCG00000004848	Chd3	87	97.025	ENSMPUG00000008861	CHD3	100	97.025	Mustela_putorius_furo
ENSMOCG00000004848	Chd3	100	96.033	ENSMLUG00000014643	-	98	95.880	Myotis_lucifugus
ENSMOCG00000004848	Chd3	100	98.116	ENSNGAG00000000773	Chd3	98	98.116	Nannospalax_galili
ENSMOCG00000004848	Chd3	86	75.981	ENSNBRG00000000636	chd3	98	75.384	Neolamprologus_brichardi
ENSMOCG00000004848	Chd3	98	94.706	ENSNLEG00000009770	CHD3	99	94.075	Nomascus_leucogenys
ENSMOCG00000004848	Chd3	86	91.758	ENSMEUG00000005852	CHD3	87	91.758	Notamacropus_eugenii
ENSMOCG00000004848	Chd3	95	95.571	ENSOPRG00000011069	CHD3	100	95.571	Ochotona_princeps
ENSMOCG00000004848	Chd3	100	97.047	ENSODEG00000017785	CHD3	99	97.047	Octodon_degus
ENSMOCG00000004848	Chd3	96	74.400	ENSONIG00000009292	chd3	100	74.395	Oreochromis_niloticus
ENSMOCG00000004848	Chd3	99	92.218	ENSOCUG00000029299	CHD3	100	91.713	Oryctolagus_cuniculus
ENSMOCG00000004848	Chd3	83	71.376	ENSORLG00000007107	chd3	93	71.253	Oryzias_latipes
ENSMOCG00000004848	Chd3	59	72.904	ENSORLG00020008387	chd3	95	72.816	Oryzias_latipes_hni
ENSMOCG00000004848	Chd3	72	79.872	ENSOMEG00000013691	chd3	99	77.408	Oryzias_melastigma
ENSMOCG00000004848	Chd3	100	96.843	ENSOGAG00000003216	CHD3	99	96.843	Otolemur_garnettii
ENSMOCG00000004848	Chd3	100	94.916	ENSOARG00000017855	CHD3	98	94.916	Ovis_aries
ENSMOCG00000004848	Chd3	100	95.403	ENSPPAG00000032886	CHD3	98	95.403	Pan_paniscus
ENSMOCG00000004848	Chd3	100	96.993	ENSPPRG00000000626	CHD3	98	96.993	Panthera_pardus
ENSMOCG00000004848	Chd3	100	97.875	ENSPTRG00000008714	CHD3	98	97.875	Pan_troglodytes
ENSMOCG00000004848	Chd3	100	97.505	ENSPANG00000023938	CHD3	98	97.505	Papio_anubis
ENSMOCG00000004848	Chd3	95	80.364	ENSPKIG00000006305	chd3	99	80.285	Paramormyrops_kingsleyae
ENSMOCG00000004848	Chd3	56	89.872	ENSPSIG00000010177	CHD3	98	90.328	Pelodiscus_sinensis
ENSMOCG00000004848	Chd3	100	98.777	ENSPEMG00000014262	Chd3	99	98.777	Peromyscus_maniculatus_bairdii
ENSMOCG00000004848	Chd3	100	93.302	ENSPCIG00000005442	CHD3	97	95.935	Phascolarctos_cinereus
ENSMOCG00000004848	Chd3	96	71.479	ENSPFOG00000012464	chd3	92	73.343	Poecilia_formosa
ENSMOCG00000004848	Chd3	88	83.401	ENSPLAG00000002887	chd3	98	71.844	Poecilia_latipinna
ENSMOCG00000004848	Chd3	54	81.585	ENSPMEG00000016725	chd3	94	72.294	Poecilia_mexicana
ENSMOCG00000004848	Chd3	97	75.213	ENSPREG00000011044	chd3	99	77.612	Poecilia_reticulata
ENSMOCG00000004848	Chd3	98	94.511	ENSPPYG00000007940	CHD3	98	94.511	Pongo_abelii
ENSMOCG00000004848	Chd3	96	96.841	ENSPCAG00000004350	CHD3	96	96.841	Procavia_capensis
ENSMOCG00000004848	Chd3	100	97.564	ENSPCOG00000020952	CHD3	98	97.303	Propithecus_coquereli
ENSMOCG00000004848	Chd3	87	95.434	ENSPVAG00000016344	CHD3	87	95.434	Pteropus_vampyrus
ENSMOCG00000004848	Chd3	98	77.363	ENSPNAG00000020393	chd3	98	80.097	Pygocentrus_nattereri
ENSMOCG00000004848	Chd3	93	97.711	ENSRNOG00000009722	Chd3	100	97.711	Rattus_norvegicus
ENSMOCG00000004848	Chd3	100	94.473	ENSRBIG00000033562	CHD3	99	93.912	Rhinopithecus_bieti
ENSMOCG00000004848	Chd3	100	97.771	ENSRROG00000029554	CHD3	98	97.771	Rhinopithecus_roxellana
ENSMOCG00000004848	Chd3	100	97.719	ENSSBOG00000020719	CHD3	99	96.943	Saimiri_boliviensis_boliviensis
ENSMOCG00000004848	Chd3	99	94.032	ENSSHAG00000014412	CHD3	100	94.188	Sarcophilus_harrisii
ENSMOCG00000004848	Chd3	88	80.935	ENSSFOG00015023123	chd3	98	75.595	Scleropages_formosus
ENSMOCG00000004848	Chd3	79	90.741	ENSSMAG00000006451	chd3	99	76.216	Scophthalmus_maximus
ENSMOCG00000004848	Chd3	56	72.619	ENSSDUG00000005792	chd3	95	72.344	Seriola_dumerili
ENSMOCG00000004848	Chd3	93	79.863	ENSSPAG00000013694	chd3	97	81.443	Stegastes_partitus
ENSMOCG00000004848	Chd3	100	97.099	ENSSSCG00000021363	CHD3	100	97.003	Sus_scrofa
ENSMOCG00000004848	Chd3	77	76.244	ENSTRUG00000014990	chd3	96	72.025	Takifugu_rubripes
ENSMOCG00000004848	Chd3	98	73.499	ENSTNIG00000012998	chd3	99	73.165	Tetraodon_nigroviridis
ENSMOCG00000004848	Chd3	65	97.619	ENSTBEG00000011454	-	71	97.619	Tupaia_belangeri
ENSMOCG00000004848	Chd3	99	97.465	ENSTTRG00000010295	CHD3	96	97.465	Tursiops_truncatus
ENSMOCG00000004848	Chd3	93	95.484	ENSUAMG00000005475	CHD3	99	95.593	Ursus_americanus
ENSMOCG00000004848	Chd3	57	100.000	ENSVPAG00000010794	-	62	100.000	Vicugna_pacos
ENSMOCG00000004848	Chd3	96	97.239	ENSVVUG00000028011	CHD3	99	96.857	Vulpes_vulpes
ENSMOCG00000004848	Chd3	99	72.570	ENSXETG00000012991	chd3	92	73.986	Xenopus_tropicalis
ENSMOCG00000004848	Chd3	53	83.070	ENSXCOG00000000809	chd3	93	83.183	Xiphophorus_couchianus
ENSMOCG00000004848	Chd3	81	86.127	ENSXMAG00000016035	chd3	99	86.127	Xiphophorus_maculatus