EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000005498 (Gene tree)
Gene ID: 101991233
Gene Symbol: Clp1
Alias: -
Full Name: cleavage and polyadenylation factor I subunit 1
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 4429 bases
Position: chr4:92258093-92262521
Accession: 101991233
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000005942	Clp1	PF06807.14	1.4e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000007171	-	1768	XM_005346671	ENSMOCP00000005942	425 (aa)	XP_005346728	UPI00038C24C9

Gene Model

Click here to download ENSMOCG00000005498's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000005498's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000005498	Clp1	100	99.059	ENSG00000172409	CLP1	100	99.059	Homo_sapiens
ENSMOCG00000005498	Clp1	98	76.651	ENSAPOG00000008242	clp1	96	76.651	Acanthochromis_polyacanthus
ENSMOCG00000005498	Clp1	100	99.529	ENSAMEG00000014551	CLP1	98	99.529	Ailuropoda_melanoleuca
ENSMOCG00000005498	Clp1	99	75.000	ENSACIG00000006310	clp1	97	75.000	Amphilophus_citrinellus
ENSMOCG00000005498	Clp1	100	75.751	ENSAOCG00000010681	clp1	100	75.751	Amphiprion_ocellaris
ENSMOCG00000005498	Clp1	99	75.694	ENSAPEG00000012165	clp1	99	76.651	Amphiprion_percula
ENSMOCG00000005498	Clp1	99	75.926	ENSATEG00000012374	clp1	98	75.926	Anabas_testudineus
ENSMOCG00000005498	Clp1	100	93.882	ENSACAG00000007139	CLP1	100	93.882	Anolis_carolinensis
ENSMOCG00000005498	Clp1	100	99.059	ENSANAG00000034935	CLP1	100	99.059	Aotus_nancymaae
ENSMOCG00000005498	Clp1	99	75.000	ENSACLG00000013573	clp1	98	75.000	Astatotilapia_calliptera
ENSMOCG00000005498	Clp1	100	77.598	ENSAMXG00000014194	clp1	100	77.598	Astyanax_mexicanus
ENSMOCG00000005498	Clp1	100	99.529	ENSBTAG00000006493	CLP1	100	99.529	Bos_taurus
ENSMOCG00000005498	Clp1	99	47.442	WBGene00010304	clpf-1	99	47.442	Caenorhabditis_elegans
ENSMOCG00000005498	Clp1	100	99.059	ENSCJAG00000008748	CLP1	100	99.059	Callithrix_jacchus
ENSMOCG00000005498	Clp1	100	99.529	ENSCAFG00000007815	CLP1	100	99.529	Canis_familiaris
ENSMOCG00000005498	Clp1	100	99.529	ENSCAFG00020000903	CLP1	100	99.529	Canis_lupus_dingo
ENSMOCG00000005498	Clp1	100	98.824	ENSCHIG00000023497	CLP1	100	98.824	Capra_hircus
ENSMOCG00000005498	Clp1	100	99.059	ENSTSYG00000006824	CLP1	99	99.059	Carlito_syrichta
ENSMOCG00000005498	Clp1	100	99.294	ENSCAPG00000009703	CLP1	100	99.294	Cavia_aperea
ENSMOCG00000005498	Clp1	98	99.519	ENSCPOG00000012554	CLP1	99	99.519	Cavia_porcellus
ENSMOCG00000005498	Clp1	100	98.824	ENSCCAG00000031957	CLP1	100	98.824	Cebus_capucinus
ENSMOCG00000005498	Clp1	100	99.059	ENSCATG00000044628	CLP1	100	99.059	Cercocebus_atys
ENSMOCG00000005498	Clp1	100	99.294	ENSCLAG00000004094	CLP1	100	99.294	Chinchilla_lanigera
ENSMOCG00000005498	Clp1	100	99.059	ENSCSAG00000005994	CLP1	100	99.059	Chlorocebus_sabaeus
ENSMOCG00000005498	Clp1	100	94.118	ENSCPBG00000016843	CLP1	100	94.118	Chrysemys_picta_bellii
ENSMOCG00000005498	Clp1	99	63.270	ENSCING00000003779	-	98	63.270	Ciona_intestinalis
ENSMOCG00000005498	Clp1	99	63.121	ENSCSAVG00000003437	-	99	63.121	Ciona_savignyi
ENSMOCG00000005498	Clp1	100	99.059	ENSCANG00000034335	CLP1	100	99.059	Colobus_angolensis_palliatus
ENSMOCG00000005498	Clp1	100	99.765	ENSCGRG00001002227	CLP1	100	99.765	Cricetulus_griseus_chok1gshd
ENSMOCG00000005498	Clp1	100	99.765	ENSCGRG00000004328	CLP1	100	99.765	Cricetulus_griseus_crigri
ENSMOCG00000005498	Clp1	99	74.246	ENSCSEG00000008614	clp1	98	74.246	Cynoglossus_semilaevis
ENSMOCG00000005498	Clp1	99	75.463	ENSCVAG00000020101	clp1	98	75.463	Cyprinodon_variegatus
ENSMOCG00000005498	Clp1	97	79.714	ENSDARG00000063663	clp1	95	79.714	Danio_rerio
ENSMOCG00000005498	Clp1	99	99.057	ENSDNOG00000042415	CLP1	90	99.057	Dasypus_novemcinctus
ENSMOCG00000005498	Clp1	100	99.529	ENSDORG00000014685	Clp1	100	99.529	Dipodomys_ordii
ENSMOCG00000005498	Clp1	99	55.869	FBgn0033842	cbc	99	55.869	Drosophila_melanogaster
ENSMOCG00000005498	Clp1	100	99.294	ENSETEG00000003009	CLP1	100	99.294	Echinops_telfairi
ENSMOCG00000005498	Clp1	97	72.397	ENSEBUG00000011648	clp1	97	72.397	Eptatretus_burgeri
ENSMOCG00000005498	Clp1	100	98.824	ENSEASG00005002093	CLP1	100	98.824	Equus_asinus_asinus
ENSMOCG00000005498	Clp1	100	98.824	ENSECAG00000011597	CLP1	100	98.824	Equus_caballus
ENSMOCG00000005498	Clp1	100	98.353	ENSEEUG00000012771	CLP1	100	98.353	Erinaceus_europaeus
ENSMOCG00000005498	Clp1	97	79.335	ENSELUG00000024048	clp1	95	79.335	Esox_lucius
ENSMOCG00000005498	Clp1	100	99.294	ENSFCAG00000006633	CLP1	100	99.294	Felis_catus
ENSMOCG00000005498	Clp1	100	92.235	ENSFALG00000011145	CLP1	100	92.235	Ficedula_albicollis
ENSMOCG00000005498	Clp1	100	99.294	ENSFDAG00000000234	CLP1	100	99.294	Fukomys_damarensis
ENSMOCG00000005498	Clp1	99	74.769	ENSFHEG00000014760	CLP1	98	74.769	Fundulus_heteroclitus
ENSMOCG00000005498	Clp1	97	79.665	ENSGMOG00000019340	clp1	95	79.665	Gadus_morhua
ENSMOCG00000005498	Clp1	100	92.941	ENSGALG00000007370	CLP1	100	92.941	Gallus_gallus
ENSMOCG00000005498	Clp1	99	75.231	ENSGAFG00000003020	clp1	99	75.231	Gambusia_affinis
ENSMOCG00000005498	Clp1	99	76.620	ENSGACG00000017832	clp1	98	76.620	Gasterosteus_aculeatus
ENSMOCG00000005498	Clp1	100	93.882	ENSGAGG00000013279	CLP1	100	93.882	Gopherus_agassizii
ENSMOCG00000005498	Clp1	100	99.059	ENSGGOG00000023006	CLP1	100	99.059	Gorilla_gorilla
ENSMOCG00000005498	Clp1	99	75.000	ENSHBUG00000010436	clp1	98	75.000	Haplochromis_burtoni
ENSMOCG00000005498	Clp1	100	99.294	ENSHGLG00000009914	CLP1	100	99.294	Heterocephalus_glaber_female
ENSMOCG00000005498	Clp1	100	99.294	ENSHGLG00100006105	CLP1	100	99.294	Heterocephalus_glaber_male
ENSMOCG00000005498	Clp1	99	76.552	ENSHCOG00000010072	clp1	99	76.552	Hippocampus_comes
ENSMOCG00000005498	Clp1	97	79.524	ENSIPUG00000016238	clp1	94	79.335	Ictalurus_punctatus
ENSMOCG00000005498	Clp1	100	99.294	ENSSTOG00000029257	CLP1	100	99.294	Ictidomys_tridecemlineatus
ENSMOCG00000005498	Clp1	100	98.824	ENSJJAG00000023691	Clp1	100	98.824	Jaculus_jaculus
ENSMOCG00000005498	Clp1	99	74.769	ENSKMAG00000011990	clp1	98	74.769	Kryptolebias_marmoratus
ENSMOCG00000005498	Clp1	99	76.157	ENSLBEG00000010201	clp1	98	76.157	Labrus_bergylta
ENSMOCG00000005498	Clp1	100	85.412	ENSLACG00000003160	CLP1	100	85.412	Latimeria_chalumnae
ENSMOCG00000005498	Clp1	73	76.708	ENSLOCG00000008074	clp1	100	77.640	Lepisosteus_oculatus
ENSMOCG00000005498	Clp1	100	99.059	ENSLAFG00000014907	CLP1	100	99.059	Loxodonta_africana
ENSMOCG00000005498	Clp1	100	99.059	ENSMFAG00000046074	CLP1	100	99.059	Macaca_fascicularis
ENSMOCG00000005498	Clp1	100	99.059	ENSMMUG00000038007	CLP1	99	99.059	Macaca_mulatta
ENSMOCG00000005498	Clp1	100	99.059	ENSMNEG00000000259	CLP1	100	99.059	Macaca_nemestrina
ENSMOCG00000005498	Clp1	100	99.059	ENSMLEG00000043556	CLP1	100	99.059	Mandrillus_leucophaeus
ENSMOCG00000005498	Clp1	100	75.520	ENSMAMG00000002149	clp1	98	75.520	Mastacembelus_armatus
ENSMOCG00000005498	Clp1	99	75.000	ENSMZEG00005002850	clp1	98	75.000	Maylandia_zebra
ENSMOCG00000005498	Clp1	100	92.941	ENSMGAG00000009643	CLP1	100	92.941	Meleagris_gallopavo
ENSMOCG00000005498	Clp1	100	99.059	ENSMAUG00000016261	Clp1	100	99.059	Mesocricetus_auratus
ENSMOCG00000005498	Clp1	100	99.529	ENSMICG00000004895	CLP1	100	99.529	Microcebus_murinus
ENSMOCG00000005498	Clp1	99	77.083	ENSMMOG00000003229	clp1	98	77.083	Mola_mola
ENSMOCG00000005498	Clp1	100	98.118	ENSMODG00000020107	-	100	98.118	Monodelphis_domestica
ENSMOCG00000005498	Clp1	100	98.118	ENSMODG00000024148	-	100	98.118	Monodelphis_domestica
ENSMOCG00000005498	Clp1	100	74.827	ENSMALG00000014239	clp1	98	74.827	Monopterus_albus
ENSMOCG00000005498	Clp1	100	99.529	MGP_CAROLIEiJ_G0023726	Clp1	100	99.529	Mus_caroli
ENSMOCG00000005498	Clp1	100	99.529	ENSMUSG00000027079	Clp1	100	99.529	Mus_musculus
ENSMOCG00000005498	Clp1	100	99.294	MGP_PahariEiJ_G0025177	Clp1	100	99.294	Mus_pahari
ENSMOCG00000005498	Clp1	100	99.529	MGP_SPRETEiJ_G0024646	Clp1	100	99.529	Mus_spretus
ENSMOCG00000005498	Clp1	100	99.529	ENSMPUG00000000268	CLP1	100	99.529	Mustela_putorius_furo
ENSMOCG00000005498	Clp1	100	98.824	ENSMLUG00000007904	CLP1	100	98.824	Myotis_lucifugus
ENSMOCG00000005498	Clp1	100	99.294	ENSNGAG00000006165	Clp1	100	99.294	Nannospalax_galili
ENSMOCG00000005498	Clp1	99	75.000	ENSNBRG00000005225	clp1	98	75.000	Neolamprologus_brichardi
ENSMOCG00000005498	Clp1	82	93.939	ENSNLEG00000012809	-	100	93.939	Nomascus_leucogenys
ENSMOCG00000005498	Clp1	100	98.118	ENSMEUG00000010949	CLP1	99	98.118	Notamacropus_eugenii
ENSMOCG00000005498	Clp1	70	99.329	ENSOPRG00000007329	CLP1	100	99.329	Ochotona_princeps
ENSMOCG00000005498	Clp1	100	99.294	ENSODEG00000011410	CLP1	100	99.294	Octodon_degus
ENSMOCG00000005498	Clp1	99	74.769	ENSONIG00000005089	clp1	98	74.769	Oreochromis_niloticus
ENSMOCG00000005498	Clp1	100	99.294	ENSOCUG00000007045	CLP1	100	99.294	Oryctolagus_cuniculus
ENSMOCG00000005498	Clp1	99	74.306	ENSORLG00000003647	clp1	98	74.306	Oryzias_latipes
ENSMOCG00000005498	Clp1	99	74.074	ENSORLG00020016676	clp1	98	74.074	Oryzias_latipes_hni
ENSMOCG00000005498	Clp1	99	74.306	ENSORLG00015019484	clp1	98	74.306	Oryzias_latipes_hsok
ENSMOCG00000005498	Clp1	99	74.943	ENSOMEG00000021303	clp1	99	74.943	Oryzias_melastigma
ENSMOCG00000005498	Clp1	100	99.294	ENSOGAG00000004508	CLP1	100	99.294	Otolemur_garnettii
ENSMOCG00000005498	Clp1	100	97.882	ENSOARG00000010145	CLP1	98	97.882	Ovis_aries
ENSMOCG00000005498	Clp1	100	99.059	ENSPPAG00000041519	CLP1	100	99.059	Pan_paniscus
ENSMOCG00000005498	Clp1	100	99.294	ENSPPRG00000006135	CLP1	100	99.294	Panthera_pardus
ENSMOCG00000005498	Clp1	100	99.294	ENSPTIG00000015866	CLP1	100	99.294	Panthera_tigris_altaica
ENSMOCG00000005498	Clp1	100	99.059	ENSPTRG00000047318	CLP1	100	99.059	Pan_troglodytes
ENSMOCG00000005498	Clp1	100	99.059	ENSPANG00000017078	CLP1	97	99.059	Papio_anubis
ENSMOCG00000005498	Clp1	97	80.387	ENSPKIG00000007697	clp1	94	80.387	Paramormyrops_kingsleyae
ENSMOCG00000005498	Clp1	95	91.542	ENSPSIG00000005468	CLP1	100	91.542	Pelodiscus_sinensis
ENSMOCG00000005498	Clp1	99	76.744	ENSPMGG00000012171	clp1	98	76.744	Periophthalmus_magnuspinnatus
ENSMOCG00000005498	Clp1	100	100.000	ENSPEMG00000011213	-	100	100.000	Peromyscus_maniculatus_bairdii
ENSMOCG00000005498	Clp1	100	76.291	ENSPMAG00000006707	clp1	100	76.291	Petromyzon_marinus
ENSMOCG00000005498	Clp1	100	97.647	ENSPCIG00000011899	CLP1	99	97.647	Phascolarctos_cinereus
ENSMOCG00000005498	Clp1	99	74.769	ENSPFOG00000008169	clp1	98	74.769	Poecilia_formosa
ENSMOCG00000005498	Clp1	99	74.769	ENSPLAG00000022388	clp1	99	74.710	Poecilia_latipinna
ENSMOCG00000005498	Clp1	99	74.769	ENSPMEG00000021088	clp1	99	74.710	Poecilia_mexicana
ENSMOCG00000005498	Clp1	99	75.000	ENSPREG00000017802	clp1	98	75.000	Poecilia_reticulata
ENSMOCG00000005498	Clp1	53	99.554	ENSPPYG00000003266	-	100	99.554	Pongo_abelii
ENSMOCG00000005498	Clp1	100	99.529	ENSPCOG00000000360	CLP1	98	99.529	Propithecus_coquereli
ENSMOCG00000005498	Clp1	100	99.529	ENSPVAG00000016270	CLP1	100	99.529	Pteropus_vampyrus
ENSMOCG00000005498	Clp1	99	75.000	ENSPNYG00000017274	clp1	97	75.000	Pundamilia_nyererei
ENSMOCG00000005498	Clp1	97	80.238	ENSPNAG00000026460	clp1	95	80.285	Pygocentrus_nattereri
ENSMOCG00000005498	Clp1	100	99.529	ENSRNOG00000007416	Clp1	100	99.529	Rattus_norvegicus
ENSMOCG00000005498	Clp1	100	99.059	ENSRBIG00000018191	CLP1	100	99.059	Rhinopithecus_bieti
ENSMOCG00000005498	Clp1	100	99.059	ENSRROG00000039265	CLP1	100	99.059	Rhinopithecus_roxellana
ENSMOCG00000005498	Clp1	100	99.059	ENSSBOG00000032517	-	100	99.059	Saimiri_boliviensis_boliviensis
ENSMOCG00000005498	Clp1	96	79.310	ENSSBOG00000010558	-	93	79.310	Saimiri_boliviensis_boliviensis
ENSMOCG00000005498	Clp1	100	98.353	ENSSHAG00000015695	CLP1	100	98.353	Sarcophilus_harrisii
ENSMOCG00000005498	Clp1	97	79.059	ENSSFOG00015000628	clp1	96	79.059	Scleropages_formosus
ENSMOCG00000005498	Clp1	99	75.000	ENSSMAG00000019423	clp1	97	75.000	Scophthalmus_maximus
ENSMOCG00000005498	Clp1	99	76.389	ENSSDUG00000014495	clp1	98	76.389	Seriola_dumerili
ENSMOCG00000005498	Clp1	99	76.157	ENSSLDG00000000937	clp1	98	76.157	Seriola_lalandi_dorsalis
ENSMOCG00000005498	Clp1	52	99.103	ENSSARG00000002459	CLP1	100	99.103	Sorex_araneus
ENSMOCG00000005498	Clp1	100	92.941	ENSSPUG00000016811	CLP1	100	92.941	Sphenodon_punctatus
ENSMOCG00000005498	Clp1	99	75.231	ENSSPAG00000016052	clp1	98	75.231	Stegastes_partitus
ENSMOCG00000005498	Clp1	100	99.529	ENSSSCG00000031442	CLP1	100	99.529	Sus_scrofa
ENSMOCG00000005498	Clp1	100	92.000	ENSTGUG00000007002	CLP1	100	92.000	Taeniopygia_guttata
ENSMOCG00000005498	Clp1	99	76.402	ENSTRUG00000012602	clp1	98	76.402	Takifugu_rubripes
ENSMOCG00000005498	Clp1	99	75.935	ENSTNIG00000013125	clp1	98	75.935	Tetraodon_nigroviridis
ENSMOCG00000005498	Clp1	100	98.353	ENSTBEG00000009975	CLP1	100	98.353	Tupaia_belangeri
ENSMOCG00000005498	Clp1	100	99.059	ENSTTRG00000002096	CLP1	100	99.059	Tursiops_truncatus
ENSMOCG00000005498	Clp1	100	99.529	ENSUAMG00000011388	CLP1	100	99.529	Ursus_americanus
ENSMOCG00000005498	Clp1	100	99.529	ENSUMAG00000018317	CLP1	100	99.529	Ursus_maritimus
ENSMOCG00000005498	Clp1	100	99.529	ENSVVUG00000017138	CLP1	97	99.529	Vulpes_vulpes
ENSMOCG00000005498	Clp1	98	77.698	ENSXETG00000007088	clp1	95	78.417	Xenopus_tropicalis
ENSMOCG00000005498	Clp1	99	75.000	ENSXCOG00000002287	clp1	98	75.000	Xiphophorus_couchianus
ENSMOCG00000005498	Clp1	99	75.000	ENSXMAG00000009783	clp1	98	75.000	Xiphophorus_maculatus