EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000005603 (Gene tree)
Gene ID: 101998909
Gene Symbol: -
Alias: -
Full Name: RNA binding motif protein 12B
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 2457 bases
Position: chrLG5:61431329-61433785
Accession: 101998909
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000006040	RRM_1	PF00076.22	7.5e-32	1	3
ENSMOCP00000006040	RRM_1	PF00076.22	7.5e-32	2	3
ENSMOCP00000006040	RRM_1	PF00076.22	7.5e-32	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000007305	-	2457	XM_005362320	ENSMOCP00000006040	818 (aa)	XP_005362377	UPI00038C6469

Gene Model

Click here to download ENSMOCG00000005603's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000005603's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000005603	-	69	70.115	ENSMOCG00000012950	Rbm12	57	69.767

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000005603	-	100	74.745	ENSG00000183808	RBM12B	100	93.902	Homo_sapiens
ENSMOCG00000005603	-	78	38.105	ENSAPOG00000013963	rbm12b	100	37.500	Acanthochromis_polyacanthus
ENSMOCG00000005603	-	100	75.854	ENSAMEG00000007134	RBM12B	100	75.854	Ailuropoda_melanoleuca
ENSMOCG00000005603	-	58	38.193	ENSACIG00000014943	rbm12b	99	39.441	Amphilophus_citrinellus
ENSMOCG00000005603	-	67	46.753	ENSAOCG00000024270	rbm12b	100	38.632	Amphiprion_ocellaris
ENSMOCG00000005603	-	66	46.269	ENSAPEG00000022079	rbm12b	96	43.852	Amphiprion_percula
ENSMOCG00000005603	-	67	46.753	ENSATEG00000004578	rbm12b	85	46.753	Anabas_testudineus
ENSMOCG00000005603	-	58	47.500	ENSATEG00000001886	zgc:153215	75	47.500	Anabas_testudineus
ENSMOCG00000005603	-	86	53.947	ENSAPLG00000002020	RBM12B	100	53.947	Anas_platyrhynchos
ENSMOCG00000005603	-	88	42.456	ENSACAG00000003463	RBM12B	70	42.281	Anolis_carolinensis
ENSMOCG00000005603	-	100	76.805	ENSANAG00000034015	RBM12B	100	76.805	Aotus_nancymaae
ENSMOCG00000005603	-	64	46.753	ENSACLG00000005578	rbm12b	82	46.753	Astatotilapia_calliptera
ENSMOCG00000005603	-	68	46.753	ENSACLG00000005575	rbm12b	84	46.753	Astatotilapia_calliptera
ENSMOCG00000005603	-	50	54.255	ENSAMXG00000020853	zgc:153215	68	56.977	Astyanax_mexicanus
ENSMOCG00000005603	-	70	42.857	ENSAMXG00000041973	rbm12b	90	42.857	Astyanax_mexicanus
ENSMOCG00000005603	-	100	73.188	ENSBTAG00000013408	RBM12B	100	73.072	Bos_taurus
ENSMOCG00000005603	-	100	62.952	ENSCAFG00000009109	RBM12B	100	72.891	Canis_familiaris
ENSMOCG00000005603	-	100	72.260	ENSCAFG00020012203	RBM12B	100	71.575	Canis_lupus_dingo
ENSMOCG00000005603	-	75	75.975	ENSCHIG00000006790	RBM12B	88	75.975	Capra_hircus
ENSMOCG00000005603	-	100	71.565	ENSTSYG00000012515	RBM12B	100	71.565	Carlito_syrichta
ENSMOCG00000005603	-	100	68.449	ENSCAPG00000003543	RBM12B	100	65.828	Cavia_aperea
ENSMOCG00000005603	-	100	68.449	ENSCPOG00000007815	RBM12B	100	65.828	Cavia_porcellus
ENSMOCG00000005603	-	100	74.190	ENSCATG00000030769	RBM12B	100	73.380	Cercocebus_atys
ENSMOCG00000005603	-	100	69.182	ENSCLAG00000017617	RBM12B	100	72.765	Chinchilla_lanigera
ENSMOCG00000005603	-	100	74.095	ENSCSAG00000018559	RBM12B	100	74.095	Chlorocebus_sabaeus
ENSMOCG00000005603	-	98	65.368	ENSCHOG00000008934	RBM12B	100	70.718	Choloepus_hoffmanni
ENSMOCG00000005603	-	85	55.944	ENSCPBG00000003061	RBM12B	100	55.944	Chrysemys_picta_bellii
ENSMOCG00000005603	-	100	74.220	ENSCANG00000030379	RBM12B	100	73.410	Colobus_angolensis_palliatus
ENSMOCG00000005603	-	100	86.698	ENSCGRG00001008710	-	97	86.698	Cricetulus_griseus_chok1gshd
ENSMOCG00000005603	-	68	48.052	ENSCSEG00000004610	rbm12b	81	48.052	Cynoglossus_semilaevis
ENSMOCG00000005603	-	58	33.906	ENSCVAG00000009259	-	99	33.766	Cyprinodon_variegatus
ENSMOCG00000005603	-	67	48.052	ENSCVAG00000011047	rbm12b	86	48.052	Cyprinodon_variegatus
ENSMOCG00000005603	-	72	46.753	ENSDARG00000079717	rbm12b	81	46.753	Danio_rerio
ENSMOCG00000005603	-	100	70.501	ENSDNOG00000041608	RBM12B	100	71.703	Dasypus_novemcinctus
ENSMOCG00000005603	-	100	69.723	ENSDORG00000024034	-	100	71.135	Dipodomys_ordii
ENSMOCG00000005603	-	72	65.742	ENSETEG00000013005	-	84	65.924	Echinops_telfairi
ENSMOCG00000005603	-	54	30.684	ENSEBUG00000009015	-	85	37.500	Eptatretus_burgeri
ENSMOCG00000005603	-	100	74.914	ENSEASG00005016297	RBM12B	100	74.116	Equus_asinus_asinus
ENSMOCG00000005603	-	100	73.859	ENSECAG00000017870	RBM12B	100	73.859	Equus_caballus
ENSMOCG00000005603	-	100	74.769	ENSFCAG00000029274	RBM12B	100	74.190	Felis_catus
ENSMOCG00000005603	-	86	52.667	ENSFALG00000014893	RBM12B	100	52.667	Ficedula_albicollis
ENSMOCG00000005603	-	100	69.271	ENSFDAG00000005576	RBM12B	97	71.739	Fukomys_damarensis
ENSMOCG00000005603	-	67	46.753	ENSFHEG00000016425	rbm12b	86	46.753	Fundulus_heteroclitus
ENSMOCG00000005603	-	69	49.333	ENSGMOG00000013467	rbm12b	90	49.333	Gadus_morhua
ENSMOCG00000005603	-	86	55.333	ENSGALG00000035129	RBM12B	100	55.333	Gallus_gallus
ENSMOCG00000005603	-	67	48.052	ENSGAFG00000007224	rbm12b	86	48.052	Gambusia_affinis
ENSMOCG00000005603	-	78	39.588	ENSGACG00000008682	rbm12b	99	39.381	Gasterosteus_aculeatus
ENSMOCG00000005603	-	85	55.634	ENSGAGG00000009774	RBM12B	100	55.634	Gopherus_agassizii
ENSMOCG00000005603	-	100	74.914	ENSGGOG00000011909	RBM12B	100	74.914	Gorilla_gorilla
ENSMOCG00000005603	-	68	46.753	ENSHBUG00000016227	rbm12b	84	46.753	Haplochromis_burtoni
ENSMOCG00000005603	-	100	68.328	ENSHGLG00000009063	RBM12B	100	72.665	Heterocephalus_glaber_female
ENSMOCG00000005603	-	100	68.328	ENSHGLG00100021324	RBM12B	100	72.665	Heterocephalus_glaber_male
ENSMOCG00000005603	-	67	50.649	ENSHCOG00000014952	rbm12b	90	50.649	Hippocampus_comes
ENSMOCG00000005603	-	80	50.562	ENSIPUG00000001167	RBM12B	97	50.562	Ictalurus_punctatus
ENSMOCG00000005603	-	100	78.690	ENSSTOG00000027445	RBM12B	100	78.690	Ictidomys_tridecemlineatus
ENSMOCG00000005603	-	100	72.027	ENSJJAG00000004165	-	100	70.748	Jaculus_jaculus
ENSMOCG00000005603	-	78	40.082	ENSKMAG00000013704	rbm12b	96	40.082	Kryptolebias_marmoratus
ENSMOCG00000005603	-	78	39.468	ENSKMAG00000013715	rbm12b	99	39.468	Kryptolebias_marmoratus
ENSMOCG00000005603	-	58	30.629	ENSLBEG00000002597	zgc:153215	99	30.629	Labrus_bergylta
ENSMOCG00000005603	-	68	64.935	ENSLACG00000007177	RBM12B	92	54.464	Latimeria_chalumnae
ENSMOCG00000005603	-	67	55.844	ENSLOCG00000018344	rbm12b	86	55.844	Lepisosteus_oculatus
ENSMOCG00000005603	-	100	71.615	ENSLAFG00000029949	RBM12B	100	71.615	Loxodonta_africana
ENSMOCG00000005603	-	100	74.335	ENSMFAG00000045430	RBM12B	100	73.526	Macaca_fascicularis
ENSMOCG00000005603	-	100	74.632	ENSMMUG00000005558	RBM12B	100	74.095	Macaca_mulatta
ENSMOCG00000005603	-	100	74.335	ENSMNEG00000041292	RBM12B	100	73.526	Macaca_nemestrina
ENSMOCG00000005603	-	100	74.208	ENSMLEG00000037288	RBM12B	100	73.756	Mandrillus_leucophaeus
ENSMOCG00000005603	-	69	48.387	ENSMAMG00000011998	rbm12b	88	48.387	Mastacembelus_armatus
ENSMOCG00000005603	-	68	46.753	ENSMZEG00005015005	rbm12b	86	46.753	Maylandia_zebra
ENSMOCG00000005603	-	68	46.753	ENSMZEG00005014845	rbm12b	85	45.946	Maylandia_zebra
ENSMOCG00000005603	-	59	56.615	ENSMGAG00000011985	RBM12B	99	56.226	Meleagris_gallopavo
ENSMOCG00000005603	-	100	87.321	ENSMAUG00000021752	-	100	87.321	Mesocricetus_auratus
ENSMOCG00000005603	-	100	75.354	ENSMICG00000036969	RBM12B	100	75.676	Microcebus_murinus
ENSMOCG00000005603	-	67	48.684	ENSMMOG00000002404	rbm12b	82	67.073	Mola_mola
ENSMOCG00000005603	-	100	56.604	ENSMODG00000007436	RBM12B	98	57.244	Monodelphis_domestica
ENSMOCG00000005603	-	85	39.231	ENSMALG00000012059	rbm12b	100	39.458	Monopterus_albus
ENSMOCG00000005603	-	100	75.711	ENSMUSG00000052137	Rbm12b2	100	75.711	Mus_musculus
ENSMOCG00000005603	-	100	76.071	ENSMUSG00000046667	Rbm12b1	100	76.071	Mus_musculus
ENSMOCG00000005603	-	100	76.190	MGP_SPRETEiJ_G0026766	-	100	76.190	Mus_spretus
ENSMOCG00000005603	-	100	69.029	MGP_SPRETEiJ_G0026765	-	100	72.616	Mus_spretus
ENSMOCG00000005603	-	100	72.222	ENSMPUG00000018637	RBM12B	100	72.087	Mustela_putorius_furo
ENSMOCG00000005603	-	100	64.428	ENSMLUG00000002359	RBM12B	100	62.893	Myotis_lucifugus
ENSMOCG00000005603	-	100	71.598	ENSNGAG00000002801	-	100	69.762	Nannospalax_galili
ENSMOCG00000005603	-	50	45.349	ENSNBRG00000013644	zgc:153215	79	45.349	Neolamprologus_brichardi
ENSMOCG00000005603	-	68	46.753	ENSNBRG00000015057	rbm12b	86	46.753	Neolamprologus_brichardi
ENSMOCG00000005603	-	100	74.492	ENSNLEG00000032050	RBM12B	100	74.492	Nomascus_leucogenys
ENSMOCG00000005603	-	100	67.715	ENSODEG00000019204	RBM12B	100	65.477	Octodon_degus
ENSMOCG00000005603	-	68	46.753	ENSONIG00000020612	rbm12b	86	46.753	Oreochromis_niloticus
ENSMOCG00000005603	-	86	62.252	ENSOANG00000015735	-	97	62.252	Ornithorhynchus_anatinus
ENSMOCG00000005603	-	100	73.624	ENSOCUG00000010353	RBM12B	100	73.739	Oryctolagus_cuniculus
ENSMOCG00000005603	-	67	50.649	ENSORLG00000008228	rbm12b	83	50.649	Oryzias_latipes
ENSMOCG00000005603	-	67	50.649	ENSORLG00020013619	rbm12b	83	50.649	Oryzias_latipes_hni
ENSMOCG00000005603	-	67	50.649	ENSORLG00015019999	rbm12b	83	50.649	Oryzias_latipes_hsok
ENSMOCG00000005603	-	67	50.649	ENSOMEG00000022523	rbm12b	83	50.649	Oryzias_melastigma
ENSMOCG00000005603	-	100	65.385	ENSOGAG00000002979	RBM12B	100	73.803	Otolemur_garnettii
ENSMOCG00000005603	-	100	74.309	ENSPTIG00000020071	RBM12B	100	74.453	Panthera_tigris_altaica
ENSMOCG00000005603	-	100	74.405	ENSPTRG00000020420	RBM12B	99	73.721	Pan_troglodytes
ENSMOCG00000005603	-	100	73.869	ENSPANG00000035535	RBM12B	100	73.643	Papio_anubis
ENSMOCG00000005603	-	67	48.052	ENSPKIG00000018719	rbm12b	85	48.052	Paramormyrops_kingsleyae
ENSMOCG00000005603	-	57	31.881	ENSPKIG00000014851	zgc:153215	98	32.016	Paramormyrops_kingsleyae
ENSMOCG00000005603	-	85	55.556	ENSPSIG00000001348	RBM12B	100	55.556	Pelodiscus_sinensis
ENSMOCG00000005603	-	100	88.256	ENSPEMG00000008279	-	100	88.256	Peromyscus_maniculatus_bairdii
ENSMOCG00000005603	-	100	56.840	ENSPCIG00000008556	RBM12B	100	57.597	Phascolarctos_cinereus
ENSMOCG00000005603	-	52	51.190	ENSPFOG00000017451	zgc:153215	67	51.190	Poecilia_formosa
ENSMOCG00000005603	-	67	48.052	ENSPFOG00000020937	rbm12b	83	48.052	Poecilia_formosa
ENSMOCG00000005603	-	67	48.052	ENSPLAG00000018782	rbm12b	86	48.052	Poecilia_latipinna
ENSMOCG00000005603	-	69	45.161	ENSPMEG00000011418	rbm12b	88	45.161	Poecilia_mexicana
ENSMOCG00000005603	-	69	45.161	ENSPREG00000020770	rbm12b	88	45.161	Poecilia_reticulata
ENSMOCG00000005603	-	100	65.803	ENSPPYG00000018745	RBM12B	100	73.816	Pongo_abelii
ENSMOCG00000005603	-	100	74.714	ENSPCOG00000023546	RBM12B	100	74.400	Propithecus_coquereli
ENSMOCG00000005603	-	100	67.600	ENSPVAG00000011803	RBM12B	100	72.352	Pteropus_vampyrus
ENSMOCG00000005603	-	68	46.753	ENSPNYG00000016696	rbm12b	86	46.753	Pundamilia_nyererei
ENSMOCG00000005603	-	58	32.065	ENSPNAG00000025628	zgc:153215	77	55.952	Pygocentrus_nattereri
ENSMOCG00000005603	-	68	48.052	ENSPNAG00000008126	rbm12b	84	48.052	Pygocentrus_nattereri
ENSMOCG00000005603	-	88	76.424	ENSRNOG00000055292	LOC679087	100	76.424	Rattus_norvegicus
ENSMOCG00000005603	-	100	75.967	ENSRNOG00000016330	Rbm12b	100	75.967	Rattus_norvegicus
ENSMOCG00000005603	-	100	74.972	ENSRBIG00000035046	RBM12B	100	72.480	Rhinopithecus_bieti
ENSMOCG00000005603	-	100	75.059	ENSRROG00000023660	RBM12B	100	73.364	Rhinopithecus_roxellana
ENSMOCG00000005603	-	100	73.220	ENSSBOG00000027592	RBM12B	100	73.107	Saimiri_boliviensis_boliviensis
ENSMOCG00000005603	-	100	56.250	ENSSHAG00000015335	RBM12B	100	57.244	Sarcophilus_harrisii
ENSMOCG00000005603	-	67	46.753	ENSSFOG00015001584	rbm12b	86	46.753	Scleropages_formosus
ENSMOCG00000005603	-	58	34.836	ENSSFOG00015009427	zgc:153215	99	34.631	Scleropages_formosus
ENSMOCG00000005603	-	67	50.649	ENSSMAG00000019708	rbm12b	86	50.649	Scophthalmus_maximus
ENSMOCG00000005603	-	74	41.865	ENSSDUG00000006856	rbm12b	95	41.468	Seriola_dumerili
ENSMOCG00000005603	-	50	50.000	ENSSLDG00000013581	zgc:153215	76	50.000	Seriola_lalandi_dorsalis
ENSMOCG00000005603	-	67	48.052	ENSSLDG00000016156	rbm12b	86	48.052	Seriola_lalandi_dorsalis
ENSMOCG00000005603	-	73	71.778	ENSSARG00000011845	-	84	71.778	Sorex_araneus
ENSMOCG00000005603	-	58	53.906	ENSSPUG00000016954	RBM12B	91	53.606	Sphenodon_punctatus
ENSMOCG00000005603	-	78	39.718	ENSSPAG00000006774	rbm12b	100	39.113	Stegastes_partitus
ENSMOCG00000005603	-	100	65.587	ENSSSCG00000006110	RBM12B	100	73.955	Sus_scrofa
ENSMOCG00000005603	-	61	53.606	ENSTGUG00000011860	RBM12B	100	53.411	Taeniopygia_guttata
ENSMOCG00000005603	-	67	48.052	ENSTRUG00000013738	rbm12b	86	48.052	Takifugu_rubripes
ENSMOCG00000005603	-	81	71.618	ENSTBEG00000000449	RBM12B	83	71.261	Tupaia_belangeri
ENSMOCG00000005603	-	100	72.881	ENSUAMG00000023639	RBM12B	100	71.073	Ursus_americanus
ENSMOCG00000005603	-	100	69.264	ENSUMAG00000016008	RBM12B	100	68.290	Ursus_maritimus
ENSMOCG00000005603	-	96	86.301	ENSVPAG00000001080	RBM12B	90	86.301	Vicugna_pacos
ENSMOCG00000005603	-	100	72.717	ENSVVUG00000002694	RBM12B	100	72.146	Vulpes_vulpes
ENSMOCG00000005603	-	59	30.947	ENSXETG00000025920	-	97	31.158	Xenopus_tropicalis
ENSMOCG00000005603	-	58	37.295	ENSXETG00000014696	rbm12b	68	37.500	Xenopus_tropicalis
ENSMOCG00000005603	-	91	44.499	ENSXETG00000014694	rbm12b	100	47.746	Xenopus_tropicalis
ENSMOCG00000005603	-	68	43.617	ENSXMAG00000014213	rbm12b	89	43.617	Xiphophorus_maculatus