EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000005820 (Gene tree)
Gene ID: 101985128
Gene Symbol: Msi2
Alias: Musashi2|msi2h
Full Name: musashi RNA-binding protein 2
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 363609 bases
Position: chr7:64583338-64946946
Accession: 1923876
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000006239	RRM_1	PF00076.22	3.5e-34	1	2
ENSMOCP00000006239	RRM_1	PF00076.22	3.5e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000007605	-	1041	-	ENSMOCP00000006239	346 (aa)	-	UPI00000285CD

Gene Model

Click here to download ENSMOCG00000005820's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000005820's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000005820	Msi2	50	42.045	ENSMOCG00000021968	-	60	41.667
ENSMOCG00000005820	Msi2	51	35.754	ENSMOCG00000021250	-	60	35.754
ENSMOCG00000005820	Msi2	83	34.247	ENSMOCG00000003562	Tardbp	53	33.133
ENSMOCG00000005820	Msi2	53	49.727	ENSMOCG00000015928	Hnrnpdl	59	41.634
ENSMOCG00000005820	Msi2	50	43.407	ENSMOCG00000019409	-	65	43.299
ENSMOCG00000005820	Msi2	51	42.857	ENSMOCG00000016931	Dazap1	98	42.857
ENSMOCG00000005820	Msi2	58	45.894	ENSMOCG00000021398	Hnrnpd	66	45.894
ENSMOCG00000005820	Msi2	51	41.935	ENSMOCG00000015117	-	55	41.919
ENSMOCG00000005820	Msi2	54	49.198	ENSMOCG00000014470	Hnrnpab	70	48.039
ENSMOCG00000005820	Msi2	96	70.904	ENSMOCG00000002286	Msi1	96	68.768
ENSMOCG00000005820	Msi2	51	43.243	ENSMOCG00000001511	Rbm3	82	43.243
ENSMOCG00000005820	Msi2	50	41.279	ENSMOCG00000009258	-	57	41.279
ENSMOCG00000005820	Msi2	53	38.202	ENSMOCG00000016310	-	62	36.818

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000005820	Msi2	100	94.509	ENSG00000153944	MSI2	100	100.000	Homo_sapiens
ENSMOCG00000005820	Msi2	100	87.896	ENSAPOG00000001658	msi2a	100	87.464	Acanthochromis_polyacanthus
ENSMOCG00000005820	Msi2	94	100.000	ENSAMEG00000002697	MSI2	99	100.000	Ailuropoda_melanoleuca
ENSMOCG00000005820	Msi2	100	74.490	ENSACIG00000009475	msi2a	100	74.490	Amphilophus_citrinellus
ENSMOCG00000005820	Msi2	55	76.000	ENSAOCG00000014822	msi2a	69	76.000	Amphiprion_ocellaris
ENSMOCG00000005820	Msi2	100	87.896	ENSAPEG00000007706	msi2a	100	87.464	Amphiprion_percula
ENSMOCG00000005820	Msi2	94	87.500	ENSATEG00000003301	-	100	87.500	Anabas_testudineus
ENSMOCG00000005820	Msi2	100	87.896	ENSATEG00000010498	msi2a	100	87.464	Anabas_testudineus
ENSMOCG00000005820	Msi2	94	71.105	ENSACAG00000005452	MSI2	68	97.826	Anolis_carolinensis
ENSMOCG00000005820	Msi2	100	94.509	ENSANAG00000037827	MSI2	100	94.509	Aotus_nancymaae
ENSMOCG00000005820	Msi2	100	87.608	ENSACLG00000007752	msi2a	100	87.179	Astatotilapia_calliptera
ENSMOCG00000005820	Msi2	100	88.473	ENSAMXG00000032796	msi2a	100	85.260	Astyanax_mexicanus
ENSMOCG00000005820	Msi2	100	85.838	ENSAMXG00000010474	msi2b	100	85.838	Astyanax_mexicanus
ENSMOCG00000005820	Msi2	94	94.154	ENSBTAG00000004406	MSI2	97	94.154	Bos_taurus
ENSMOCG00000005820	Msi2	68	60.643	WBGene00003423	msi-1	76	60.643	Caenorhabditis_elegans
ENSMOCG00000005820	Msi2	100	94.509	ENSCJAG00000013998	MSI2	100	94.509	Callithrix_jacchus
ENSMOCG00000005820	Msi2	94	98.746	ENSCAFG00020025620	MSI2	81	98.746	Canis_lupus_dingo
ENSMOCG00000005820	Msi2	100	93.642	ENSCHIG00000016580	MSI2	100	93.642	Capra_hircus
ENSMOCG00000005820	Msi2	94	89.667	ENSCPOG00000034042	MSI2	99	89.667	Cavia_porcellus
ENSMOCG00000005820	Msi2	100	94.509	ENSCCAG00000033927	MSI2	100	94.509	Cebus_capucinus
ENSMOCG00000005820	Msi2	100	93.353	ENSCATG00000040879	MSI2	100	93.353	Cercocebus_atys
ENSMOCG00000005820	Msi2	100	99.711	ENSCLAG00000014325	MSI2	100	99.711	Chinchilla_lanigera
ENSMOCG00000005820	Msi2	100	94.509	ENSCSAG00000005633	MSI2	100	94.509	Chlorocebus_sabaeus
ENSMOCG00000005820	Msi2	71	100.000	ENSCHOG00000008660	MSI2	83	100.000	Choloepus_hoffmanni
ENSMOCG00000005820	Msi2	94	93.688	ENSCPBG00000009942	MSI2	96	93.688	Chrysemys_picta_bellii
ENSMOCG00000005820	Msi2	60	72.000	ENSCING00000018579	-	97	50.000	Ciona_intestinalis
ENSMOCG00000005820	Msi2	62	66.667	ENSCSAVG00000010397	-	72	65.517	Ciona_savignyi
ENSMOCG00000005820	Msi2	94	100.000	ENSCANG00000036414	MSI2	100	100.000	Colobus_angolensis_palliatus
ENSMOCG00000005820	Msi2	100	94.524	ENSCGRG00001013330	Msi2	100	94.524	Cricetulus_griseus_chok1gshd
ENSMOCG00000005820	Msi2	94	99.693	ENSCGRG00000003141	Msi2	100	99.693	Cricetulus_griseus_crigri
ENSMOCG00000005820	Msi2	79	69.340	ENSCSEG00000013557	msi2a	83	67.925	Cynoglossus_semilaevis
ENSMOCG00000005820	Msi2	100	75.434	ENSCSEG00000003266	-	100	75.434	Cynoglossus_semilaevis
ENSMOCG00000005820	Msi2	54	73.370	ENSCSEG00000013549	msi2a	100	73.370	Cynoglossus_semilaevis
ENSMOCG00000005820	Msi2	100	87.608	ENSCVAG00000017075	msi2a	100	87.179	Cyprinodon_variegatus
ENSMOCG00000005820	Msi2	100	79.381	ENSDARG00000033901	msi2a	100	79.381	Danio_rerio
ENSMOCG00000005820	Msi2	93	88.509	ENSDARG00000032614	msi2b	100	98.020	Danio_rerio
ENSMOCG00000005820	Msi2	94	94.118	ENSDNOG00000014501	MSI2	100	94.118	Dasypus_novemcinctus
ENSMOCG00000005820	Msi2	79	81.395	ENSDORG00000005394	Msi2	84	81.395	Dipodomys_ordii
ENSMOCG00000005820	Msi2	97	59.104	FBgn0260943	Rbp6	88	67.808	Drosophila_melanogaster
ENSMOCG00000005820	Msi2	64	76.316	ENSETEG00000012450	-	64	76.316	Echinops_telfairi
ENSMOCG00000005820	Msi2	89	68.810	ENSEBUG00000006732	msi2a	87	68.489	Eptatretus_burgeri
ENSMOCG00000005820	Msi2	94	89.320	ENSEASG00005002965	MSI2	97	89.143	Equus_asinus_asinus
ENSMOCG00000005820	Msi2	100	97.175	ENSECAG00000011435	MSI2	100	97.175	Equus_caballus
ENSMOCG00000005820	Msi2	83	79.705	ENSEEUG00000007810	MSI2	100	79.705	Erinaceus_europaeus
ENSMOCG00000005820	Msi2	100	84.393	ENSELUG00000011747	msi2a	100	84.393	Esox_lucius
ENSMOCG00000005820	Msi2	100	87.143	ENSELUG00000001361	msi2b	100	87.143	Esox_lucius
ENSMOCG00000005820	Msi2	100	94.509	ENSFCAG00000041686	MSI2	100	94.509	Felis_catus
ENSMOCG00000005820	Msi2	54	79.487	ENSFCAG00000033787	-	82	79.487	Felis_catus
ENSMOCG00000005820	Msi2	94	100.000	ENSFDAG00000016118	MSI2	100	100.000	Fukomys_damarensis
ENSMOCG00000005820	Msi2	100	87.608	ENSFHEG00000000084	msi2a	96	92.763	Fundulus_heteroclitus
ENSMOCG00000005820	Msi2	53	92.308	ENSGMOG00000007596	-	100	92.308	Gadus_morhua
ENSMOCG00000005820	Msi2	100	96.243	ENSGALG00000005567	MSI2	100	96.243	Gallus_gallus
ENSMOCG00000005820	Msi2	96	75.444	ENSGAFG00000006974	msi2a	90	93.377	Gambusia_affinis
ENSMOCG00000005820	Msi2	94	96.053	ENSGAGG00000016542	MSI2	100	96.053	Gopherus_agassizii
ENSMOCG00000005820	Msi2	94	100.000	ENSGGOG00000013182	MSI2	100	100.000	Gorilla_gorilla
ENSMOCG00000005820	Msi2	100	87.608	ENSHBUG00000020800	msi2a	100	87.179	Haplochromis_burtoni
ENSMOCG00000005820	Msi2	100	90.751	ENSHGLG00000012444	MSI2	100	90.751	Heterocephalus_glaber_female
ENSMOCG00000005820	Msi2	76	100.000	ENSHGLG00100003744	MSI2	100	100.000	Heterocephalus_glaber_male
ENSMOCG00000005820	Msi2	76	80.989	ENSHCOG00000017241	-	77	81.557	Hippocampus_comes
ENSMOCG00000005820	Msi2	97	85.207	ENSHCOG00000000266	msi2a	97	84.795	Hippocampus_comes
ENSMOCG00000005820	Msi2	96	89.189	ENSIPUG00000003732	msi2b	100	81.792	Ictalurus_punctatus
ENSMOCG00000005820	Msi2	100	82.370	ENSIPUG00000021097	msi2a	100	82.370	Ictalurus_punctatus
ENSMOCG00000005820	Msi2	94	89.667	ENSSTOG00000007884	MSI2	99	89.667	Ictidomys_tridecemlineatus
ENSMOCG00000005820	Msi2	76	88.889	ENSJJAG00000006292	-	100	88.406	Jaculus_jaculus
ENSMOCG00000005820	Msi2	96	86.186	ENSKMAG00000009494	msi2a	96	86.446	Kryptolebias_marmoratus
ENSMOCG00000005820	Msi2	94	68.915	ENSLBEG00000026223	-	100	68.915	Labrus_bergylta
ENSMOCG00000005820	Msi2	100	83.237	ENSLBEG00000007061	msi2a	100	83.237	Labrus_bergylta
ENSMOCG00000005820	Msi2	100	82.171	ENSLOCG00000004675	msi2b	100	83.740	Lepisosteus_oculatus
ENSMOCG00000005820	Msi2	94	100.000	ENSMFAG00000003775	MSI2	100	100.000	Macaca_fascicularis
ENSMOCG00000005820	Msi2	94	100.000	ENSMMUG00000002069	MSI2	100	100.000	Macaca_mulatta
ENSMOCG00000005820	Msi2	100	94.509	ENSMNEG00000045275	MSI2	100	94.509	Macaca_nemestrina
ENSMOCG00000005820	Msi2	94	100.000	ENSMLEG00000033888	MSI2	100	100.000	Mandrillus_leucophaeus
ENSMOCG00000005820	Msi2	100	84.943	ENSMAMG00000010503	msi2a	100	85.511	Mastacembelus_armatus
ENSMOCG00000005820	Msi2	96	86.866	ENSMAMG00000002488	-	99	92.053	Mastacembelus_armatus
ENSMOCG00000005820	Msi2	100	87.283	ENSMZEG00005007676	msi2a	100	87.283	Maylandia_zebra
ENSMOCG00000005820	Msi2	100	99.712	ENSMAUG00000003862	Msi2	100	99.712	Mesocricetus_auratus
ENSMOCG00000005820	Msi2	100	76.657	ENSMICG00000032913	-	100	75.216	Microcebus_murinus
ENSMOCG00000005820	Msi2	100	94.509	ENSMICG00000013598	-	100	94.509	Microcebus_murinus
ENSMOCG00000005820	Msi2	90	81.459	ENSMMOG00000008348	msi2a	91	82.622	Mola_mola
ENSMOCG00000005820	Msi2	76	98.551	ENSMODG00000014790	MSI2	100	98.551	Monodelphis_domestica
ENSMOCG00000005820	Msi2	100	87.896	ENSMALG00000000071	msi2a	100	92.810	Monopterus_albus
ENSMOCG00000005820	Msi2	100	100.000	MGP_CAROLIEiJ_G0016948	Msi2	100	100.000	Mus_caroli
ENSMOCG00000005820	Msi2	100	100.000	ENSMUSG00000069769	Msi2	100	100.000	Mus_musculus
ENSMOCG00000005820	Msi2	100	100.000	MGP_PahariEiJ_G0018079	Msi2	100	100.000	Mus_pahari
ENSMOCG00000005820	Msi2	100	100.000	MGP_SPRETEiJ_G0017795	Msi2	100	100.000	Mus_spretus
ENSMOCG00000005820	Msi2	94	94.462	ENSMPUG00000015377	MSI2	97	94.462	Mustela_putorius_furo
ENSMOCG00000005820	Msi2	94	94.154	ENSMLUG00000007865	MSI2	97	94.154	Myotis_lucifugus
ENSMOCG00000005820	Msi2	100	100.000	ENSNGAG00000017807	Msi2	100	100.000	Nannospalax_galili
ENSMOCG00000005820	Msi2	100	82.948	ENSNBRG00000014596	msi2a	92	93.421	Neolamprologus_brichardi
ENSMOCG00000005820	Msi2	94	100.000	ENSNLEG00000008059	MSI2	100	100.000	Nomascus_leucogenys
ENSMOCG00000005820	Msi2	64	88.816	ENSOPRG00000000872	-	64	88.816	Ochotona_princeps
ENSMOCG00000005820	Msi2	100	99.711	ENSODEG00000011974	MSI2	100	99.711	Octodon_degus
ENSMOCG00000005820	Msi2	55	93.377	ENSONIG00000001972	msi2a	84	93.377	Oreochromis_niloticus
ENSMOCG00000005820	Msi2	93	95.745	ENSOANG00000005667	MSI2	77	95.745	Ornithorhynchus_anatinus
ENSMOCG00000005820	Msi2	94	94.462	ENSOCUG00000010440	MSI2	97	94.462	Oryctolagus_cuniculus
ENSMOCG00000005820	Msi2	96	87.087	ENSORLG00000009671	msi2a	95	87.349	Oryzias_latipes
ENSMOCG00000005820	Msi2	94	88.650	ENSORLG00020021556	msi2a	95	88.182	Oryzias_latipes_hni
ENSMOCG00000005820	Msi2	96	87.087	ENSORLG00015004592	msi2a	95	87.349	Oryzias_latipes_hsok
ENSMOCG00000005820	Msi2	100	81.792	ENSOMEG00000000146	msi2a	98	86.520	Oryzias_melastigma
ENSMOCG00000005820	Msi2	94	90.154	ENSOGAG00000005621	MSI2	99	90.154	Otolemur_garnettii
ENSMOCG00000005820	Msi2	94	100.000	ENSPPAG00000037697	MSI2	100	100.000	Pan_paniscus
ENSMOCG00000005820	Msi2	94	94.462	ENSPPRG00000001848	MSI2	91	99.103	Panthera_pardus
ENSMOCG00000005820	Msi2	70	78.512	ENSPTIG00000021873	-	92	78.512	Panthera_tigris_altaica
ENSMOCG00000005820	Msi2	94	100.000	ENSPTIG00000021678	MSI2	96	100.000	Panthera_tigris_altaica
ENSMOCG00000005820	Msi2	94	100.000	ENSPTRG00000009437	MSI2	100	100.000	Pan_troglodytes
ENSMOCG00000005820	Msi2	100	94.509	ENSPANG00000022319	MSI2	100	94.509	Papio_anubis
ENSMOCG00000005820	Msi2	100	81.452	ENSPKIG00000007038	-	100	80.376	Paramormyrops_kingsleyae
ENSMOCG00000005820	Msi2	100	76.296	ENSPSIG00000008618	MSI2	87	96.269	Pelodiscus_sinensis
ENSMOCG00000005820	Msi2	100	82.659	ENSPMGG00000005888	msi2a	100	82.659	Periophthalmus_magnuspinnatus
ENSMOCG00000005820	Msi2	100	95.198	ENSPCIG00000006063	MSI2	100	95.198	Phascolarctos_cinereus
ENSMOCG00000005820	Msi2	54	90.476	ENSPFOG00000019337	MSI2	92	90.476	Poecilia_formosa
ENSMOCG00000005820	Msi2	55	89.510	ENSPLAG00000000436	msi2a	76	90.141	Poecilia_latipinna
ENSMOCG00000005820	Msi2	55	79.021	ENSPMEG00000013247	msi2a	80	79.021	Poecilia_mexicana
ENSMOCG00000005820	Msi2	99	80.925	ENSPREG00000000881	msi2a	99	80.925	Poecilia_reticulata
ENSMOCG00000005820	Msi2	94	89.844	ENSPPYG00000008244	-	100	89.844	Pongo_abelii
ENSMOCG00000005820	Msi2	74	65.625	ENSPCAG00000010552	MSI2	100	65.625	Procavia_capensis
ENSMOCG00000005820	Msi2	94	85.531	ENSPVAG00000017053	MSI2	100	85.531	Pteropus_vampyrus
ENSMOCG00000005820	Msi2	100	87.283	ENSPNYG00000018393	msi2a	100	87.283	Pundamilia_nyererei
ENSMOCG00000005820	Msi2	100	88.473	ENSPNAG00000014957	msi2a	100	86.127	Pygocentrus_nattereri
ENSMOCG00000005820	Msi2	100	85.303	ENSPNAG00000000844	msi2b	100	82.948	Pygocentrus_nattereri
ENSMOCG00000005820	Msi2	94	93.919	ENSRNOG00000025338	Msi2	100	93.919	Rattus_norvegicus
ENSMOCG00000005820	Msi2	94	100.000	ENSSBOG00000026425	MSI2	100	100.000	Saimiri_boliviensis_boliviensis
ENSMOCG00000005820	Msi2	94	98.765	ENSSHAG00000008672	MSI2	100	98.765	Sarcophilus_harrisii
ENSMOCG00000005820	Msi2	100	62.687	ENSSFOG00015012168	msi2b	82	82.041	Scleropages_formosus
ENSMOCG00000005820	Msi2	94	84.615	ENSSFOG00015021687	-	97	82.154	Scleropages_formosus
ENSMOCG00000005820	Msi2	100	87.896	ENSSMAG00000018484	msi2a	100	87.464	Scophthalmus_maximus
ENSMOCG00000005820	Msi2	100	87.896	ENSSDUG00000014507	msi2a	100	87.464	Seriola_dumerili
ENSMOCG00000005820	Msi2	100	82.081	ENSSDUG00000021968	-	99	91.391	Seriola_dumerili
ENSMOCG00000005820	Msi2	100	83.237	ENSSLDG00000017172	msi2a	100	83.237	Seriola_lalandi_dorsalis
ENSMOCG00000005820	Msi2	55	93.671	ENSSPUG00000000913	-	94	93.671	Sphenodon_punctatus
ENSMOCG00000005820	Msi2	100	77.778	ENSSPAG00000017793	msi2a	100	77.493	Stegastes_partitus
ENSMOCG00000005820	Msi2	100	97.175	ENSSSCG00000038505	MSI2	100	97.175	Sus_scrofa
ENSMOCG00000005820	Msi2	76	99.034	ENSTGUG00000008452	MSI2	100	99.034	Taeniopygia_guttata
ENSMOCG00000005820	Msi2	100	82.153	ENSTRUG00000021248	msi2a	100	82.153	Takifugu_rubripes
ENSMOCG00000005820	Msi2	70	82.231	ENSTBEG00000001241	MSI2	73	82.231	Tupaia_belangeri
ENSMOCG00000005820	Msi2	94	84.375	ENSTTRG00000002189	MSI2	100	84.375	Tursiops_truncatus
ENSMOCG00000005820	Msi2	94	94.462	ENSUAMG00000000700	MSI2	97	94.462	Ursus_americanus
ENSMOCG00000005820	Msi2	90	86.219	ENSUMAG00000000505	MSI2	95	86.219	Ursus_maritimus
ENSMOCG00000005820	Msi2	53	84.615	ENSVPAG00000006837	-	62	84.615	Vicugna_pacos
ENSMOCG00000005820	Msi2	100	99.711	ENSVVUG00000011783	MSI2	100	99.711	Vulpes_vulpes
ENSMOCG00000005820	Msi2	100	77.979	ENSXCOG00000006113	msi2a	100	77.979	Xiphophorus_couchianus
ENSMOCG00000005820	Msi2	100	87.608	ENSXMAG00000000608	msi2a	100	87.179	Xiphophorus_maculatus