EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000006004 (Gene tree)
Gene ID: 101998137
Gene Symbol: -
Alias: -
Full Name: exosome component 1
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 11093 bases
Position: chr8:69412957-69424049
Accession: 101998137
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000006367	EXOSC1	PF10447.9	5.4e-15	1	1
ENSMOCP00000006370	ECR1_N	PF14382.6	3.6e-09	1	1
ENSMOCP00000006367	ECR1_N	PF14382.6	4.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000007798	-	1133	XM_005352285	ENSMOCP00000006367	195 (aa)	XP_005352342	UPI0000DA1E2B
ENSMOCT00000007802	-	465	-	ENSMOCP00000006370	154 (aa)	-	UPI0001CF3CAD

Gene Model

Click here to download ENSMOCG00000006004's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000006004's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000006004	-	97	93.158	ENSMOCG00000017124	-	97	93.158

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000006004	-	100	96.753	ENSG00000171311	EXOSC1	100	95.897	Homo_sapiens
ENSMOCG00000006004	-	98	79.058	ENSAPOG00000007822	exosc1	98	79.058	Acanthochromis_polyacanthus
ENSMOCG00000006004	-	100	97.436	ENSAMEG00000000129	EXOSC1	100	97.436	Ailuropoda_melanoleuca
ENSMOCG00000006004	-	96	78.723	ENSACIG00000018956	exosc1	92	78.723	Amphilophus_citrinellus
ENSMOCG00000006004	-	98	79.058	ENSAOCG00000010699	exosc1	98	79.058	Amphiprion_ocellaris
ENSMOCG00000006004	-	92	69.832	ENSAPEG00000012690	exosc1	96	69.832	Amphiprion_percula
ENSMOCG00000006004	-	98	78.534	ENSATEG00000018683	exosc1	98	78.534	Anabas_testudineus
ENSMOCG00000006004	-	99	86.010	ENSACAG00000002101	EXOSC1	99	86.010	Anolis_carolinensis
ENSMOCG00000006004	-	100	98.052	ENSANAG00000034669	EXOSC1	100	98.052	Aotus_nancymaae
ENSMOCG00000006004	-	98	79.058	ENSACLG00000021243	exosc1	98	79.058	Astatotilapia_calliptera
ENSMOCG00000006004	-	98	80.628	ENSAMXG00000011116	exosc1	98	80.628	Astyanax_mexicanus
ENSMOCG00000006004	-	100	97.949	ENSBTAG00000012699	EXOSC1	100	97.949	Bos_taurus
ENSMOCG00000006004	-	92	32.447	WBGene00012966	exos-1	90	32.447	Caenorhabditis_elegans
ENSMOCG00000006004	-	100	98.052	ENSCJAG00000016586	EXOSC1	100	98.052	Callithrix_jacchus
ENSMOCG00000006004	-	100	96.923	ENSCAFG00000009068	EXOSC1	94	96.923	Canis_familiaris
ENSMOCG00000006004	-	100	96.923	ENSCAFG00020006002	EXOSC1	94	96.923	Canis_lupus_dingo
ENSMOCG00000006004	-	100	97.949	ENSCHIG00000015253	EXOSC1	100	97.949	Capra_hircus
ENSMOCG00000006004	-	100	98.052	ENSTSYG00000000760	EXOSC1	100	98.052	Carlito_syrichta
ENSMOCG00000006004	-	100	98.052	ENSCPOG00000001173	EXOSC1	100	98.052	Cavia_porcellus
ENSMOCG00000006004	-	100	59.627	ENSCCAG00000023986	EXOSC1	100	59.627	Cebus_capucinus
ENSMOCG00000006004	-	100	96.753	ENSCATG00000034114	EXOSC1	100	96.753	Cercocebus_atys
ENSMOCG00000006004	-	100	98.701	ENSCLAG00000002463	EXOSC1	100	98.701	Chinchilla_lanigera
ENSMOCG00000006004	-	100	95.385	ENSCSAG00000005870	EXOSC1	100	95.385	Chlorocebus_sabaeus
ENSMOCG00000006004	-	96	82.888	ENSCHOG00000006477	EXOSC1	100	82.888	Choloepus_hoffmanni
ENSMOCG00000006004	-	54	83.962	ENSCPBG00000011949	EXOSC1	88	83.962	Chrysemys_picta_bellii
ENSMOCG00000006004	-	95	55.615	ENSCING00000022734	-	89	55.615	Ciona_intestinalis
ENSMOCG00000006004	-	95	56.150	ENSCSAVG00000010865	-	95	56.150	Ciona_savignyi
ENSMOCG00000006004	-	100	96.753	ENSCANG00000034159	EXOSC1	100	96.753	Colobus_angolensis_palliatus
ENSMOCG00000006004	-	100	100.000	ENSCGRG00001000335	Exosc1	100	100.000	Cricetulus_griseus_chok1gshd
ENSMOCG00000006004	-	100	100.000	ENSCGRG00000011602	Exosc1	100	100.000	Cricetulus_griseus_crigri
ENSMOCG00000006004	-	98	67.016	ENSCSEG00000007895	exosc1	95	67.016	Cynoglossus_semilaevis
ENSMOCG00000006004	-	98	75.393	ENSCVAG00000016748	exosc1	98	75.393	Cyprinodon_variegatus
ENSMOCG00000006004	-	98	79.581	ENSDARG00000059841	exosc1	98	79.581	Danio_rerio
ENSMOCG00000006004	-	75	96.622	ENSDNOG00000007983	EXOSC1	100	96.622	Dasypus_novemcinctus
ENSMOCG00000006004	-	100	98.052	ENSDORG00000016528	Exosc1	100	98.052	Dipodomys_ordii
ENSMOCG00000006004	-	94	48.148	FBgn0032346	Csl4	92	48.148	Drosophila_melanogaster
ENSMOCG00000006004	-	100	96.410	ENSETEG00000002469	-	100	96.410	Echinops_telfairi
ENSMOCG00000006004	-	99	62.245	ENSEBUG00000008164	exosc1	98	62.245	Eptatretus_burgeri
ENSMOCG00000006004	-	100	87.179	ENSEASG00005008684	EXOSC1	100	87.179	Equus_asinus_asinus
ENSMOCG00000006004	-	61	76.471	ENSECAG00000010621	EXOSC1	71	76.471	Equus_caballus
ENSMOCG00000006004	-	100	96.410	ENSEEUG00000005647	EXOSC1	100	96.410	Erinaceus_europaeus
ENSMOCG00000006004	-	94	79.891	ENSELUG00000017369	exosc1	81	79.891	Esox_lucius
ENSMOCG00000006004	-	100	97.436	ENSFCAG00000040563	EXOSC1	94	97.436	Felis_catus
ENSMOCG00000006004	-	100	84.615	ENSFALG00000008450	EXOSC1	100	84.615	Ficedula_albicollis
ENSMOCG00000006004	-	100	97.436	ENSFDAG00000000846	EXOSC1	100	97.436	Fukomys_damarensis
ENSMOCG00000006004	-	98	75.393	ENSFHEG00000009154	exosc1	98	75.393	Fundulus_heteroclitus
ENSMOCG00000006004	-	98	79.058	ENSGMOG00000008993	exosc1	98	79.058	Gadus_morhua
ENSMOCG00000006004	-	100	73.333	ENSGALG00000039917	EXOSC1	100	88.356	Gallus_gallus
ENSMOCG00000006004	-	98	75.393	ENSGAFG00000010265	exosc1	94	75.393	Gambusia_affinis
ENSMOCG00000006004	-	98	79.058	ENSGACG00000018936	exosc1	98	79.058	Gasterosteus_aculeatus
ENSMOCG00000006004	-	100	86.154	ENSGAGG00000019192	EXOSC1	100	86.154	Gopherus_agassizii
ENSMOCG00000006004	-	100	84.103	ENSGGOG00000003099	EXOSC1	100	84.103	Gorilla_gorilla
ENSMOCG00000006004	-	98	79.058	ENSHBUG00000017857	exosc1	98	79.058	Haplochromis_burtoni
ENSMOCG00000006004	-	100	98.052	ENSHGLG00000016927	EXOSC1	100	98.052	Heterocephalus_glaber_female
ENSMOCG00000006004	-	100	98.052	ENSHGLG00100012208	EXOSC1	100	98.052	Heterocephalus_glaber_male
ENSMOCG00000006004	-	98	78.010	ENSHCOG00000019882	exosc1	98	78.010	Hippocampus_comes
ENSMOCG00000006004	-	98	79.581	ENSIPUG00000007685	exosc1	98	79.581	Ictalurus_punctatus
ENSMOCG00000006004	-	100	98.052	ENSSTOG00000006615	EXOSC1	100	98.052	Ictidomys_tridecemlineatus
ENSMOCG00000006004	-	63	81.148	ENSSTOG00000029860	-	93	81.148	Ictidomys_tridecemlineatus
ENSMOCG00000006004	-	100	97.436	ENSJJAG00000013311	Exosc1	100	97.436	Jaculus_jaculus
ENSMOCG00000006004	-	98	77.083	ENSKMAG00000001202	exosc1	81	77.083	Kryptolebias_marmoratus
ENSMOCG00000006004	-	98	78.534	ENSLBEG00000011448	exosc1	98	78.534	Labrus_bergylta
ENSMOCG00000006004	-	98	74.522	ENSLOCG00000003776	exosc1	99	74.522	Lepisosteus_oculatus
ENSMOCG00000006004	-	100	97.436	ENSLAFG00000015983	EXOSC1	100	97.436	Loxodonta_africana
ENSMOCG00000006004	-	100	96.753	ENSMFAG00000001493	EXOSC1	100	96.753	Macaca_fascicularis
ENSMOCG00000006004	-	100	96.753	ENSMMUG00000020028	EXOSC1	100	96.753	Macaca_mulatta
ENSMOCG00000006004	-	100	95.897	ENSMNEG00000029816	EXOSC1	100	95.897	Macaca_nemestrina
ENSMOCG00000006004	-	100	96.753	ENSMLEG00000027643	EXOSC1	100	96.753	Mandrillus_leucophaeus
ENSMOCG00000006004	-	98	79.581	ENSMAMG00000012200	exosc1	98	79.581	Mastacembelus_armatus
ENSMOCG00000006004	-	98	79.058	ENSMZEG00005007042	exosc1	98	79.058	Maylandia_zebra
ENSMOCG00000006004	-	100	87.179	ENSMAUG00000020462	-	100	87.179	Mesocricetus_auratus
ENSMOCG00000006004	-	100	97.403	ENSMICG00000007664	EXOSC1	100	97.403	Microcebus_murinus
ENSMOCG00000006004	-	99	75.817	ENSMMOG00000021403	exosc1	99	75.817	Mola_mola
ENSMOCG00000006004	-	100	91.837	ENSMODG00000004213	EXOSC1	100	91.837	Monodelphis_domestica
ENSMOCG00000006004	-	94	79.891	ENSMALG00000007061	exosc1	92	79.891	Monopterus_albus
ENSMOCG00000006004	-	100	99.487	MGP_CAROLIEiJ_G0022959	Exosc1	100	99.487	Mus_caroli
ENSMOCG00000006004	-	100	98.974	ENSMUSG00000034321	Exosc1	100	98.974	Mus_musculus
ENSMOCG00000006004	-	100	100.000	MGP_PahariEiJ_G0014449	Exosc1	100	100.000	Mus_pahari
ENSMOCG00000006004	-	100	99.487	MGP_SPRETEiJ_G0023880	Exosc1	100	99.487	Mus_spretus
ENSMOCG00000006004	-	100	97.436	ENSMPUG00000017044	EXOSC1	100	97.436	Mustela_putorius_furo
ENSMOCG00000006004	-	100	96.923	ENSMLUG00000009228	EXOSC1	100	96.923	Myotis_lucifugus
ENSMOCG00000006004	-	100	97.949	ENSNGAG00000022033	Exosc1	100	97.949	Nannospalax_galili
ENSMOCG00000006004	-	97	76.667	ENSNBRG00000024007	exosc1	97	76.667	Neolamprologus_brichardi
ENSMOCG00000006004	-	100	96.753	ENSNLEG00000013872	EXOSC1	100	96.753	Nomascus_leucogenys
ENSMOCG00000006004	-	59	89.565	ENSMEUG00000002246	EXOSC1	100	89.565	Notamacropus_eugenii
ENSMOCG00000006004	-	100	97.436	ENSOPRG00000005065	EXOSC1	100	97.436	Ochotona_princeps
ENSMOCG00000006004	-	100	98.052	ENSODEG00000016709	EXOSC1	100	98.052	Octodon_degus
ENSMOCG00000006004	-	98	79.058	ENSONIG00000017683	exosc1	98	79.058	Oreochromis_niloticus
ENSMOCG00000006004	-	59	92.174	ENSOANG00000006563	EXOSC1	98	90.323	Ornithorhynchus_anatinus
ENSMOCG00000006004	-	100	92.308	ENSOCUG00000026461	-	100	92.308	Oryctolagus_cuniculus
ENSMOCG00000006004	-	100	96.939	ENSOCUG00000011898	-	100	96.939	Oryctolagus_cuniculus
ENSMOCG00000006004	-	98	77.604	ENSORLG00000011595	exosc1	98	77.604	Oryzias_latipes
ENSMOCG00000006004	-	98	77.604	ENSORLG00020005831	exosc1	98	77.604	Oryzias_latipes_hni
ENSMOCG00000006004	-	98	77.604	ENSORLG00015004317	exosc1	98	77.604	Oryzias_latipes_hsok
ENSMOCG00000006004	-	97	64.162	ENSOMEG00000013907	exosc1	98	64.162	Oryzias_melastigma
ENSMOCG00000006004	-	100	97.436	ENSOGAG00000016259	EXOSC1	100	97.436	Otolemur_garnettii
ENSMOCG00000006004	-	100	97.436	ENSOARG00000010136	EXOSC1	100	97.436	Ovis_aries
ENSMOCG00000006004	-	100	96.753	ENSPPAG00000039842	EXOSC1	100	96.753	Pan_paniscus
ENSMOCG00000006004	-	100	97.436	ENSPPRG00000023366	EXOSC1	100	97.436	Panthera_pardus
ENSMOCG00000006004	-	100	97.436	ENSPTIG00000017701	EXOSC1	100	97.436	Panthera_tigris_altaica
ENSMOCG00000006004	-	100	96.753	ENSPTRG00000002808	EXOSC1	100	96.753	Pan_troglodytes
ENSMOCG00000006004	-	100	96.753	ENSPANG00000021324	EXOSC1	100	96.753	Papio_anubis
ENSMOCG00000006004	-	98	80.105	ENSPKIG00000016037	exosc1	98	80.105	Paramormyrops_kingsleyae
ENSMOCG00000006004	-	75	81.507	ENSPSIG00000013571	EXOSC1	98	81.148	Pelodiscus_sinensis
ENSMOCG00000006004	-	98	68.063	ENSPMGG00000014002	exosc1	98	68.063	Periophthalmus_magnuspinnatus
ENSMOCG00000006004	-	100	100.000	ENSPEMG00000010710	-	100	100.000	Peromyscus_maniculatus_bairdii
ENSMOCG00000006004	-	95	70.588	ENSPMAG00000000195	exosc1	95	70.588	Petromyzon_marinus
ENSMOCG00000006004	-	100	92.821	ENSPCIG00000002210	EXOSC1	99	92.821	Phascolarctos_cinereus
ENSMOCG00000006004	-	98	74.869	ENSPFOG00000006755	exosc1	94	74.869	Poecilia_formosa
ENSMOCG00000006004	-	98	74.869	ENSPLAG00000005880	exosc1	98	74.869	Poecilia_latipinna
ENSMOCG00000006004	-	98	74.869	ENSPMEG00000015598	exosc1	94	74.869	Poecilia_mexicana
ENSMOCG00000006004	-	98	65.969	ENSPREG00000000405	exosc1	93	65.969	Poecilia_reticulata
ENSMOCG00000006004	-	100	95.385	ENSPPYG00000002531	EXOSC1	100	95.385	Pongo_abelii
ENSMOCG00000006004	-	100	97.436	ENSPCAG00000009135	EXOSC1	100	97.436	Procavia_capensis
ENSMOCG00000006004	-	100	91.282	ENSPCOG00000027539	EXOSC1	100	91.282	Propithecus_coquereli
ENSMOCG00000006004	-	100	97.436	ENSPVAG00000003372	EXOSC1	100	97.436	Pteropus_vampyrus
ENSMOCG00000006004	-	98	79.058	ENSPNYG00000021745	exosc1	98	79.058	Pundamilia_nyererei
ENSMOCG00000006004	-	98	79.581	ENSPNAG00000001944	exosc1	98	79.581	Pygocentrus_nattereri
ENSMOCG00000006004	-	100	100.000	ENSRNOG00000048708	Exosc1	100	100.000	Rattus_norvegicus
ENSMOCG00000006004	-	100	96.753	ENSRBIG00000035618	EXOSC1	100	96.753	Rhinopithecus_bieti
ENSMOCG00000006004	-	100	96.753	ENSRROG00000032589	EXOSC1	100	96.753	Rhinopithecus_roxellana
ENSMOCG00000006004	-	100	97.436	ENSSBOG00000000359	EXOSC1	100	97.436	Saimiri_boliviensis_boliviensis
ENSMOCG00000006004	-	75	94.558	ENSSHAG00000018219	EXOSC1	100	94.558	Sarcophilus_harrisii
ENSMOCG00000006004	-	98	81.675	ENSSFOG00015009069	exosc1	98	81.675	Scleropages_formosus
ENSMOCG00000006004	-	97	76.842	ENSSFOG00015016289	-	98	76.842	Scleropages_formosus
ENSMOCG00000006004	-	98	79.581	ENSSMAG00000003721	exosc1	98	79.581	Scophthalmus_maximus
ENSMOCG00000006004	-	98	79.581	ENSSDUG00000002993	exosc1	98	79.581	Seriola_dumerili
ENSMOCG00000006004	-	98	79.581	ENSSLDG00000025181	exosc1	98	79.581	Seriola_lalandi_dorsalis
ENSMOCG00000006004	-	100	83.077	ENSSARG00000000162	EXOSC1	100	83.077	Sorex_araneus
ENSMOCG00000006004	-	99	84.021	ENSSPUG00000012263	EXOSC1	99	84.021	Sphenodon_punctatus
ENSMOCG00000006004	-	98	70.681	ENSSPAG00000016792	exosc1	82	70.681	Stegastes_partitus
ENSMOCG00000006004	-	100	96.410	ENSSSCG00000010518	EXOSC1	91	96.410	Sus_scrofa
ENSMOCG00000006004	-	98	82.812	ENSTGUG00000009692	EXOSC1	99	82.812	Taeniopygia_guttata
ENSMOCG00000006004	-	97	73.016	ENSTRUG00000007706	exosc1	98	73.016	Takifugu_rubripes
ENSMOCG00000006004	-	97	72.917	ENSTNIG00000014079	exosc1	97	72.917	Tetraodon_nigroviridis
ENSMOCG00000006004	-	100	88.205	ENSTBEG00000006011	EXOSC1	100	88.205	Tupaia_belangeri
ENSMOCG00000006004	-	94	96.739	ENSTTRG00000009887	EXOSC1	100	96.739	Tursiops_truncatus
ENSMOCG00000006004	-	100	84.516	ENSUAMG00000010266	EXOSC1	100	84.516	Ursus_americanus
ENSMOCG00000006004	-	100	83.974	ENSUMAG00000022002	EXOSC1	100	83.974	Ursus_maritimus
ENSMOCG00000006004	-	100	96.923	ENSVVUG00000023192	EXOSC1	63	96.923	Vulpes_vulpes
ENSMOCG00000006004	-	98	79.688	ENSXETG00000003434	exosc1	99	79.688	Xenopus_tropicalis
ENSMOCG00000006004	-	62	84.167	ENSXCOG00000014499	exosc1	92	84.167	Xiphophorus_couchianus
ENSMOCG00000006004	-	98	66.492	ENSXMAG00000023382	exosc1	93	66.492	Xiphophorus_maculatus